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List of works by Alan McNally

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Parallel independent evolution of pathogenicity within the genus Yersinia

scientific article
Validated H5 Eurasian real-time reverse transcriptase-polymerase chain reaction and its application in H5N1 outbreaks in 2005-2006.

scientific article published in March 2007
Why prokaryotes have pangenomes

scientific article published on 28 March 2017
Combined Analysis of Variation in Core, Accessory and Regulatory Genome Regions Provides a Super-Resolution View into the Evolution of Bacterial Populations

scientific article
Intestinal carriage of verocytotoxigenic Escherichia coli O157, Salmonella, thermophilic Campylobacter and Yersinia enterocolitica, in cattle, sheep and pigs at slaughter in Great Britain during 2003.

scientific article published on 26 July 2007
Recombination is a key driver of genomic and phenotypic diversity in a Pseudomonas aeruginosa population during cystic fibrosis infection

scientific article
Differences in levels of secreted locus of enterocyte effacement proteins between human disease-associated and bovine Escherichia coli O157.

retracted scientific article published on August 2001
Comparison of the biotypes of Yersinia enterocolitica isolated from pigs, cattle and sheep at slaughter and from humans with yersiniosis in Great Britain during 1999-2000.

scientific article published on January 2004
Molecular epidemiology of extraintestinal pathogenic Escherichia coli isolates from a regional cohort of elderly patients highlights the prevalence of ST131 strains with increased antimicrobial resistance in both community and hospital care settings

scientific article
'Add, stir and reduce': Yersinia spp. as model bacteria for pathogen evolution

scientific article published on February 2016
The evolutionary path to extraintestinal pathogenic, drug-resistant Escherichia coli is marked by drastic reduction in detectable recombination within the core genome

scientific article published on January 2013
Genomic analysis uncovers a phenotypically diverse but genetically homogeneous Escherichia coli ST131 clone circulating in unrelated urinary tract infections

scientific article
NDM Metallo-β-Lactamases and Their Bacterial Producers in Health Care Settings

scientific article published on 30 January 2019
Increased human pathogenic potential of Escherichia coli from polymicrobial urinary tract infections in comparison to isolates from monomicrobial culture samples.

scientific article published on 14 October 2010
A new variant of mcr-3 in an extensively drug-resistant Escherichia coli clinical isolate carrying mcr-1 and blaNDM-5.

scientific article published on 2 October 2017
IncP Plasmid Carrying Colistin Resistance Gene mcr-1 in Klebsiella pneumoniae from Hospital Sewage

scientific article
Multidrug-resistant Escherichia coli bacteremia

scientific article published on October 2013
Effect of substitutions in the thiamin diphosphate-magnesium fold on the activation of the pyruvate dehydrogenase complex from Escherichia coli by cofactors and substrate

scientific article
Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections

scientific article
Remarkable Diversity of Escherichia coli Carrying mcr-1 from Hospital Sewage with the Identification of Two New mcr-1 Variants

scientific article
Yersinia enterocolitica isolates of differing biotypes from humans and animals are adherent, invasive and persist in macrophages, but differ in cytokine secretion profiles in vitro

scientific article published on December 2006
Infection dynamics of highly pathogenic avian influenza and virulent avian paramyxovirus type 1 viruses in chickens, turkeys and ducks

scientific article
Diversification of Colonization Factors in a Multidrug-Resistant Escherichia coli Lineage Evolving under Negative Frequency-Dependent Selection

scientific article published on 23 April 2019
Comparative genome analysis identifies few traits unique to the Escherichia coli ST131 H30Rx clade and extensive mosaicism at the capsule locus

scientific article
Development of rapid, automated diagnostics for infectious disease: advances and challenges

scientific article
Cj1136 is required for lipooligosaccharide biosynthesis, hyperinvasion, and chick colonization by Campylobacter jejuni

scientific article
Gene Loss and Lineage-Specific Restriction-Modification Systems Associated with Niche Differentiation in the Campylobacter jejuni Sequence Type 403 Clonal Complex.

scientific article published on 20 March 2015
blaNDM-21, a new variant of blaNDM in an Escherichia coli clinical isolate carrying blaCTX-M-55 and rmtB

scientific article published on 01 September 2018
Genomic analysis of extra-intestinal pathogenic Escherichia coli urosepsis.

scientific article published on 10 April 2013
An aflagellate mutant Yersinia enterocolitica biotype 1A strain displays altered invasion of epithelial cells, persistence in macrophages, and cytokine secretion profiles in vitro

scientific article published on May 2007
Genomic dissection of the 1994 Cronobacter sakazakii outbreak in a French neonatal intensive care unit.

scientific article published on 5 October 2015
Escherichia coli of sequence type 3835 carrying bla NDM-1, bla CTX-M-15, bla CMY-42 and bla SHV-12.

scientific article published on 21 July 2015
Clinically Relevant Plasmid-Host Interactions Indicate that Transcriptional and Not Genomic Modifications Ameliorate Fitness Costs of Klebsiella pneumoniae Carbapenemase-Carrying Plasmids.

scientific article published on 24 April 2018
Increase in bacteraemia cases in the East Midlands region of the UK due to MDR Escherichia coli ST73: high levels of genomic and plasmid diversity in causative isolates.

scientific article published on 30 October 2015
Directional gene flow and ecological separation in Yersinia enterocolitica

scientific article
Complete genomic characterization of two Escherichia coli lineages responsible for a cluster of carbapenem-resistant infections in a Chinese hospital

article
Genomic and Functional Analysis of Emerging Virulent and Multidrug-Resistant Escherichia coli Lineage Sequence Type 648

scientific article published on 24 May 2019
Genetic import and phenotype specific alleles associated with hyper-invasion in Campylobacter jejuni

scientific article published on 24 October 2015
The Occurence of Colistin-Resistant Hypervirulent in China

article
Occurrence of colistin-resistant hypervirulent Klebsiella variicola

scientific article published on 01 November 2018
Use of whole-genus genome sequence data to develop a multilocus sequence typing tool that accurately identifies Yersinia isolates to the species and subspecies levels

scientific article
Phenotypic microarrays suggest Escherichia coli ST131 is not a metabolically distinct lineage of extra-intestinal pathogenic E. coli

scientific article (publication date: 2014)
Optimised chronic infection models demonstrate that siderophore 'cheating' in Pseudomonas aeruginosa is context specific.

scientific article published on 11 July 2017
Cryptic transmission of ST405 Escherichia coli carrying bla NDM-4 in hospital.

scientific article published on 10 January 2018
The co-transfer of plasmid-borne colistin-resistant genes mcr-1 and mcr-3.5, the carbapenemase gene bla and the 16S methylase gene rmtB from Escherichia coli

scientific article published in Scientific Reports
Draft Genome Sequences of Three Newly Identified Species in the Genus Cronobacter, C. helveticus LMG23732T, C. pulveris LMG24059, and C. zurichensis LMG23730T.

scientific article published on 26 September 2013
The coexistence of two blaNDM-5 genes on an IncF plasmid as revealed by nanopore sequencing

scientific article published on 12 February 2018
Occurrence of Enterobacter hormaechei carrying blaNDM-1 and blaKPC-2 in China

scientific article published on 19 October 2017
The Ecology and Evolution of Pangenomes

scientific article published on 01 October 2019
Draft Genome Sequence of the Earliest Cronobacter sakazakii Sequence Type 4 Strain, NCIMB 8272

scientific article published on 26 September 2013

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