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List of works by Michael B. Clark

Accurate expression quantification from nanopore direct RNA sequencing with NanoCount

scientific article published on 01 February 2022

Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing

scientific article published on 11 November 2021

DNase I-hypersensitive exons colocalize with promoters and distal regulatory elements

scientific article

Genome-wide analysis of long noncoding RNA stability

scientific article published on 9 March 2012

Genome-wide discovery of human splicing branchpoints

scientific article

Improved definition of the mouse transcriptome via targeted RNA sequencing

scientific article published on May 2016

Intergenic disease-associated regions are abundant in novel transcripts.

scientific article published on 28 December 2017

Long Noncoding RNAs CUPID1 and CUPID2 Mediate Breast Cancer Risk at 11q13 by Modulating the Response to DNA Damage.

scientific article published on August 2017

Long noncoding RNAs in cell biology ⬇️

scientific article published on January 20, 2011

Long-read sequencing reveals the complex splicing profile of the psychiatric risk gene CACNA1C in human brain

scientific article published on 06 November 2019

Mammalian gene PEG10 expresses two reading frames by high efficiency -1 frameshifting in embryonic-associated tissues

scientific article published on 16 October 2007

Multi-omic analysis elucidates Complex I deficiency caused by a deep intronic variant in NDUFB10

scientific article published on 10 November 2020

Pinstripe: a suite of programs for integrating transcriptomic and proteomic datasets identifies novel proteins and improves differentiation of protein-coding and non-coding genes

scientific article published on 7 October 2012

Quantitative gene profiling of long noncoding RNAs with targeted RNA sequencing

scientific article published on 9 March 2015

RNA lights up ⬇️

scientific article published on October 13, 2011

RNAcentral: a comprehensive database of non-coding RNA sequences

scientific article (publication date: 4 January 2017)

RNAcentral: an international database of ncRNA sequences

scientific article

SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer

scientific article

Targeted RNA sequencing enhances gene expression profiling of ultra-low input samples

scientific article published on 28 June 2020

Targeted sequencing for gene discovery and quantification using RNA CaptureSeq

scientific article published on 3 April 2014

The dark matter rises: the expanding world of regulatory RNAs.

scientific article published on January 2013

The long and the short of it: unlocking nanopore long-read RNA sequencing data with short-read differential expression analysis tools

scientific article published on 26 April 2021

The reality of pervasive transcription

scientific article

Transcriptional and epi-transcriptional dynamics of SARS-CoV-2 during cellular infection

scientific article published on 23 April 2021

lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs

scientific article

lncRNAdb: a reference database for long noncoding RNAs

scientific article

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