List of works - Dapeng Zhang

A conserved NAD+ binding pocket that regulates protein-protein interactions during aging

scientific article

A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems ⬇️

scientific article

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification

scientific article published on 12 December 2015

Auto-regulation of estrogen receptor subtypes and gene expression profiling of 17beta-estradiol action in the neuroendocrine axis of male goldfish.

scientific article

Bacterial GRAS domain proteins throw new light on gibberellic acid response mechanisms

scientific article

Characterization of multiple nestin isoforms in the goldfish brain

scientific article

Comparative Phylogenomic Analysis Reveals Evolutionary Genomic Changes and Novel Toxin Families in Endophytic <i>Liberibacter</i> Pathogens

scientific article published on 15 September 2021

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling

scientific article published on 20 November 2015

Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA.

scientific article

Defining global neuroendocrine gene expression patterns associated with reproductive seasonality in fish

scientific article

Discovery of Novel DENN Proteins: Implications for the Evolution of Eukaryotic Intracellular Membrane Structures and Human Disease

scientific article published in 2012

EFCAB7 and IQCE regulate hedgehog signaling by tethering the EVC-EVC2 complex to the base of primary cilia

scientific article

Evolution of steroid-5alpha-reductases and comparison of their function with 5beta-reductase.

scientific article published on 15 August 2009

Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems

scientific article

Functional insight into Maelstrom in the germline piRNA pathway: a unique domain homologous to the DnaQ-H 3'-5' exonuclease, its lineage-specific expansion/loss and evolutionarily active site switch

scientific article

Gene flow and biological conflict systems in the origin and evolution of eukaryotes

scientific article

Identification of novel families and classification of the C2 domain superfamily elucidate the origin and evolution of membrane targeting activities in eukaryotes

scientific article

Integration of membrane and nuclear estrogen receptor signaling.

scientific article

Lineage-specific expansions of TET/JBP genes and a new class of DNA transposons shape fungal genomic and epigenetic landscapes

scientific article

MicroTrout: A comprehensive, genome-wide miRNA target prediction framework for rainbow trout, Oncorhynchus mykiss

scientific article

Novel clades of the HU/IHF superfamily point to unexpected roles in the eukaryotic centrosome, chromosome partitioning, and biologic conflicts

scientific article

Novel transglutaminase-like peptidase and C2 domains elucidate the structure, biogenesis and evolution of the ciliary compartment

scientific article

OST-HTH: a novel predicted RNA-binding domain

scientific article

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics

scientific article

Profiling neuroendocrine gene expression changes following fadrozole-induced estrogen decline in the female goldfish

scientific article published on 09 June 2009

Protein and DNA modifications: evolutionary imprints of bacterial biochemical diversification and geochemistry on the provenance of eukaryotic epigenetics

scientific article

Rapid modulation of gene expression profiles in the telencephalon of male goldfish following exposure to waterborne sex pheromones.

scientific article published on 22 June 2013

Requirement of PEA3 for transcriptional activation of FAK gene in tumor metastasis

scientific article

Resilience of biochemical activity in protein domains in the face of structural divergence

scientific article

SANTA domain: a novel conserved protein module in Eukaryota with potential involvement in chromatin regulation

scientific article published on 28 July 2006

Screening for novel hexanucleotide repeat expansions at ALS- and FTD-associated loci

scientific article published on 11 May 2016

Secretoneurin is a potential paracrine factor from lactotrophs stimulating gonadotropin release in the goldfish pituitary.

scientific article

The eukaryotic translation initiation regulator CDC123 defines a divergent clade of ATP-grasp enzymes with a predicted role in novel protein modifications

scientific article published on 15 May 2015

The goldfish (Carassius auratus) as a model for neuroendocrine signaling

scientific article published on 05 July 2008

The natural history of ADP-ribosyltransferases and the ADP-ribosylation system

scientific article

Transposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectors

scientific article

Using generalized procrustes analysis (GPA) for normalization of cDNA microarray data

scientific article

Whole exome sequencing identifies the TNNI3K gene as a cause of familial conduction system disease and congenital junctional ectopic tachycardia.

scientific article

List of works by Dapeng Zhang

A conserved NAD+ binding pocket that regulates protein-protein interactions during aging

A novel immunity system for bacterial nucleic acid degrading toxins and its recruitment in various eukaryotic and DNA viral systems ⬇️

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification

Auto-regulation of estrogen receptor subtypes and gene expression profiling of 17beta-estradiol action in the neuroendocrine axis of male goldfish.

Bacterial GRAS domain proteins throw new light on gibberellic acid response mechanisms

Characterization of multiple nestin isoforms in the goldfish brain

Comparative Phylogenomic Analysis Reveals Evolutionary Genomic Changes and Novel Toxin Families in Endophytic <i>Liberibacter</i> Pathogens

Comparative genomic analyses reveal a vast, novel network of nucleotide-centric systems in biological conflicts, immunity and signaling

Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA.

Defining global neuroendocrine gene expression patterns associated with reproductive seasonality in fish

Discovery of Novel DENN Proteins: Implications for the Evolution of Eukaryotic Intracellular Membrane Structures and Human Disease

EFCAB7 and IQCE regulate hedgehog signaling by tethering the EVC-EVC2 complex to the base of primary cilia

Evolution of steroid-5alpha-reductases and comparison of their function with 5beta-reductase.

Evolution of the deaminase fold and multiple origins of eukaryotic editing and mutagenic nucleic acid deaminases from bacterial toxin systems

Functional insight into Maelstrom in the germline piRNA pathway: a unique domain homologous to the DnaQ-H 3'-5' exonuclease, its lineage-specific expansion/loss and evolutionarily active site switch

Gene flow and biological conflict systems in the origin and evolution of eukaryotes

Identification of novel families and classification of the C2 domain superfamily elucidate the origin and evolution of membrane targeting activities in eukaryotes

Integration of membrane and nuclear estrogen receptor signaling.

Lineage-specific expansions of TET/JBP genes and a new class of DNA transposons shape fungal genomic and epigenetic landscapes

MicroTrout: A comprehensive, genome-wide miRNA target prediction framework for rainbow trout, Oncorhynchus mykiss

Novel clades of the HU/IHF superfamily point to unexpected roles in the eukaryotic centrosome, chromosome partitioning, and biologic conflicts

Novel transglutaminase-like peptidase and C2 domains elucidate the structure, biogenesis and evolution of the ciliary compartment

OST-HTH: a novel predicted RNA-binding domain

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics

Profiling neuroendocrine gene expression changes following fadrozole-induced estrogen decline in the female goldfish

Protein and DNA modifications: evolutionary imprints of bacterial biochemical diversification and geochemistry on the provenance of eukaryotic epigenetics

Rapid modulation of gene expression profiles in the telencephalon of male goldfish following exposure to waterborne sex pheromones.

Requirement of PEA3 for transcriptional activation of FAK gene in tumor metastasis

Resilience of biochemical activity in protein domains in the face of structural divergence

SANTA domain: a novel conserved protein module in Eukaryota with potential involvement in chromatin regulation

Screening for novel hexanucleotide repeat expansions at ALS- and FTD-associated loci

Secretoneurin is a potential paracrine factor from lactotrophs stimulating gonadotropin release in the goldfish pituitary.

The eukaryotic translation initiation regulator CDC123 defines a divergent clade of ATP-grasp enzymes with a predicted role in novel protein modifications

The goldfish (Carassius auratus) as a model for neuroendocrine signaling

The natural history of ADP-ribosyltransferases and the ADP-ribosylation system

Transposons to toxins: the provenance, architecture and diversification of a widespread class of eukaryotic effectors

Using generalized procrustes analysis (GPA) for normalization of cDNA microarray data

Whole exome sequencing identifies the TNNI3K gene as a cause of familial conduction system disease and congenital junctional ectopic tachycardia.