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List of works by Gioacchino Natoli

A birthday gift for TRADD

scientific article published on 01 September 2008

A c-Rel subdomain responsible for enhanced DNA-binding affinity and selective gene activation.

scientific article

A dual cis-regulatory code links IRF8 to constitutive and inducible gene expression in macrophages

scientific article

A first exon termination checkpoint preferentially suppresses extragenic transcription

scientific article published on 25 March 2021

A hyper-dynamic equilibrium between promoter-bound and nucleoplasmic dimers controls NF-kappaB-dependent gene activity

scientific article

A large fraction of extragenic RNA pol II transcription sites overlap enhancers

scientific article

A shortcut for early macrophage recruitment into tumors by activated oncogenes

scientific article published on February 2017

Adaptation and memory in immune responses

scientific article published on 18 June 2019

Anti-inflammatory cyclopentenone prostaglandins are direct inhibitors of IkappaB kinase

scientific article

Apoptotic, non-apoptotic, and anti-apoptotic pathways of tumor necrosis factor signalling

scientific article published on 01 October 1998

Arginine methyltransferase CARM1 is a promoter-specific regulator of NF-kappaB-dependent gene expression

scientific journal article

CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors.

scientific article

Characterization of the hepatitis B virus preS/S region encoded transcriptional transactivator

scientific article published on April 1, 1992

Characterization of the hepatitis B virus transactivators: a possible direct role of the virus in the development of hepatocellular carcinoma

scientific article published on January 1993

Chromatin contributions to the regulation of innate immunity

scientific article published on 06 February 2014

Chromatin remodelling and autocrine TNFα are required for optimal interleukin-6 expression in activated human neutrophils

scientific article published on 23 January 2015

Co-optation of Tandem DNA Repeats for the Maintenance of Mesenchymal Identity

scientific article published on 26 April 2018

Control of NF-kappaB-dependent transcriptional responses by chromatin organization

scientific article published on October 2009

Coregulation of transcription factor binding and nucleosome occupancy through DNA features of mammalian enhancers.

scientific article

Cutting edge: An inactive chromatin configuration at the IL-10 locus in human neutrophils

scientific article published on 25 January 2013

Deciphering cis-regulatory control in inflammatory cells

scientific article published on 06 May 2013

Defective and nondefective adenovirus vectors for expressing foreign genes in vitro and in vivo

scientific article published on May 1991

Degradation of promoter-bound p65/RelA is essential for the prompt termination of the nuclear factor kappaB response

scientific article

Dissection of transcriptional and cis-regulatory control of differentiation in human pancreatic cancer

scientific article published on 14 January 2016

Dynamic changes in histone H3 Lys 9 methylation occurring at tightly regulated inducible inflammatory genes

scientific article published on September 2002

Endogenous retrotransposition activates oncogenic pathways in hepatocellular carcinoma

scientific article published on March 2013

Epigenetic regulation of neutrophil development and function

scientific article published on 12 April 2016

Expression of thec-myc protooncogene product in cells infected with the hepatitis delta virus

FOXA2 controls the cis-regulatory networks of pancreatic cancer cells in a differentiation grade-specific manner

scientific article published on 17 September 2019

Fas/Apo1 mutations and autoimmune lymphoproliferative syndrome in a patient with type 2 autoimmune hepatitis

article by L Pensati et al published October 1997 in Gastroenterology

Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data ⬇️

scientific article published on October 6, 2011

From the Beauty of Genomic Landscapes to the Strength of Transcriptional Mechanisms

scientific article published in March 2016

Functional genomics of the inflammatory response: where are we now? ⬇️

scientific article published on June 28, 2013

Genome-organizing factors Top2 and Hmo1 prevent chromosome fragility at sites of S phase transcription.

scientific article

Hepatitis B virus X gene product acts as a transactivator in vivo.

scientific article published in July 1994

High constitutive activity of a broad panel of housekeeping and tissue-specific cis-regulatory elements depends on a subset of ETS proteins

scientific article

Housekeeping and tissue-specific cis-regulatory elements: Recipes for specificity and recipes for activity

scientific article published on 9 October 2017

IKK-gamma is an essential regulatory subunit of the IkappaB kinase complex

scientific article

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.

scientific article published on 4 March 2010

In Vivo Genetic Screens of Patient-Derived Tumors Revealed Unexpected Frailty of the Transformed Phenotype.

scientific article

Induction of the DNA-binding activity of c-jun/c-fos heterodimers by the hepatitis B virus transactivator pX

scientific article published on February 1994

Inhibition of NF-kappa B activation by arsenite through reaction with a critical cysteine in the activation loop of Ikappa B kinase

scientific article published on November 2000

Interactions of NF-kappaB with chromatin: the art of being at the right place at the right time

scientific article

Interferon regulatory factor 1 (IRF1) controls the metabolic programmes of low-grade pancreatic cancer cells

scientific article published in 2022

Intracellular localization of full-length and truncated hepatitis C virus core protein expressed in mammalian cells.

scientific article published on June 1994

Jmjd3 contributes to the control of gene expression in LPS-activated macrophages

scientific article published on 24 September 2009

Latent enhancers activated by stimulation in differentiated cells

scientific article

Lineages, cell types and functional states: a genomic view ⬇️

scientific article published on July 29, 2013

Little Things that Count in Transcriptional Regulation

scientific article published on 01 August 2004

Macrophage Activation and Polarization: Nomenclature and Experimental Guidelines

scholarly article by Peter J. Murray et al published August 2014 in Immunity

Macrophage Activation: Glancing into Diversity

scientific article published on 01 February 2014

Macrophage activation and polarization: nomenclature and experimental guidelines

scientific article (publication date: 17 July 2014)

Macrophages and cancer: from mechanisms to therapeutic implications

scientific article published on 11 March 2015

Maintaining cell identity through global control of genomic organization

scientific article published on July 2010

Massive gene amplification drives paediatric hepatocellular carcinoma caused by bile salt export pump deficiency

scientific article published on 13 May 2014

Memory and flexibility of cytokine gene expression as separable properties of human T(H)1 and T(H)2 lymphocytes

scientific article published on 25 November 2002

Modulation of NF-kappaB activity by exchange of dimers.

scientific article

Molecular control of activation and priming in macrophages

scientific article

Mutual epithelium-macrophage dependency in liver carcinogenesis mediated by ST18.

scientific article published on 14 November 2016

MyoD prevents cyclinA/cdk2 containing E2F complexes formation in terminally differentiated myocytes.

scientific article published on March 1997

NF-kappaB: no longer an island, but a piece of a continent

scientific article published on 5 March 2010

NF‐κB and chromatin: ten years on the path from basic mechanisms to candidate drugs ⬇️

scientific article published on March 1, 2012

Non-coding transcription at cis-regulatory elements: Computational and experimental approaches ⬇️

scientific article published on March 29, 2013

Noncoding Transcription at Enhancers: General Principles and Functional Models ⬇️

scientific article published on August 16, 2012

Noncooperative interactions between transcription factors and clustered DNA binding sites enable graded transcriptional responses to environmental inputs

scientific article

Nuclear factor kB-independent cytoprotective pathways originating at tumor necrosis factor receptor-associated factor 2

scientific journal article

Nuclear ubiquitin ligases, NF-kappaB degradation, and the control of inflammation

scientific article published on 08 January 2008

Opposing macrophage polarization programs show extensive epigenomic and transcriptional cross-talk

scientific article published on 13 March 2017

PARP14 Controls the Nuclear Accumulation of a Subset of Type I IFN–Inducible Proteins

scientific article published on 02 March 2018

Plastic downregulation of the transcriptional repressor BCL6 during maturation of human dendritic cells

scientific article

RFX transcription factors control a miR-150/PDAP1 axis that restrains the proliferation of human T cells

scientific article published on 10 February 2022

Rapamycin-sensitive signals control TCR/CD28-driven Ifng, Il4 and Foxp3 transcription and promoter region methylation

scientific article

Reactive Oxygen Intermediates Mediate Angiotensin II-induced c-Jun•c-Fos Heterodimer DNA Binding Activity and Proliferative Hypertrophic Responses in Myogenic Cells ⬇️

scientific article published on September 22, 1995

Reactive oxygen intermediates (ROIs) are involved in the intracellular transduction of angiotensin II signal in C2C12 cells.

scientific article published on March 1995

Requirement for the histone deacetylase Hdac3 for the inflammatory gene expression program in macrophages

scientific article

Shaping alternative NF-kappaB-dependent gene expression programs: new clues to specificity.

scientific article

Short-term memory of danger signals and environmental stimuli in immune cells

scientific article published in August 2013

Specificity and Function of IRF Family Transcription Factors: Insights from Genomics

scientific article

TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities

scientific article published on 4 May 2016

TET2 Regulates Mast Cell Differentiation and Proliferation through Catalytic and Non-catalytic Activities

scientific article published on 01 August 2017

The Control of Gene Expression in Macrophages

article

The H3K27 demethylase JMJD3 is required for maintenance of the embryonic respiratory neuronal network, neonatal breathing, and survival.

scientific article

The gene (LGALS3BP) encoding the serum protein 90K, associated with cancer and infection by the human immunodeficiency virus, maps at 17q25

scientific article

The genomic landscapes of inflammation.

scientific article published on January 2011

The hepatitis B virus X gene induces p53-mediated programmed cell death

scientific article

The histone H3 lysine 27-specific demethylase Jmjd3 is required for neural commitment

scientific article

The histone H3 lysine-27 demethylase Jmjd3 links inflammation to inhibition of polycomb-mediated gene silencing

scientific journal article

The histone methyltransferase Wbp7 controls macrophage function through GPI glycolipid anchor synthesis

scientific article published on 5 April 2012

The human toll signaling pathway: divergence of nuclear factor kappaB and JNK/SAPK activation upstream of tumor necrosis factor receptor-associated factor 6 (TRAF6)

scientific article

Tolerance and M2 (alternative) macrophage polarization are related processes orchestrated by p50 nuclear factor kappaB.

scholarly article

Trained immunity: A program of innate immune memory in health and disease.

scientific article

Trans-activation of epidermal growth factor receptor gene by the hepatitis B virus X-gene product.

scientific article published on October 1993

Transcript dynamics of proinflammatory genes revealed by sequence analysis of subcellular RNA fractions

scientific article

Transcription of Mammalian cis-Regulatory Elements Is Restrained by Actively Enforced Early Termination.

scientific article published on 22 October 2015

Transcriptional control of inflammatory responses

scientific article published on 11 September 2014

Transcriptional control of macrophage diversity and specialization

scientific article published on September 2011

Transcriptional determination and functional specificity of myeloid cells: making sense of diversity

scientific article published on 5 June 2017

Transcriptional regulation of macrophage polarization: enabling diversity with identity

scientific article published on 25 October 2011

Transcriptional regulation via the NF-kappaB signaling module.

scientific article published on October 2006

Transcriptional repressors as guardians of tissue macrophage identity

scientific article published on 17 September 2019

Tuning up inflammation: how DNA sequence and chromatin organization control the induction of inflammatory genes by NF-kappaB.

scientific article

Two functionally distinct subsets of mast cells discriminated By IL-2-independent CD25 activities.

scientific article published on 25 July 2014

Two modes of transcriptional activation at native promoters by NF-kappaB p65

scientific article

Two waves of nuclear factor kappaB recruitment to target promoters

scientific article

Understanding Spontaneous Conversion: The Case of the Ly6C − Monocyte

scientific article published on 01 May 2017

When Sirtuins and NF-κB Collide

scientific article published on 01 January 2009

When antimicrobial peptides hit the wrong target: a novel link between tumour macrophages and cancer stem cells

scientific article published on 12 May 2015

p38-Dependent marking of inflammatory genes for increased NF-kappa B recruitment

scientific article published on 17 December 2001

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