List of works - Michael D Lee

Applications and Considerations of GToTree: A User-Friendly Workflow for Phylogenomics

scientific article published on 25 July 2019

Assessing Marine Microbial Induced Corrosion at Santa Catalina Island, California.

scientific article published on 25 October 2016

Comment on "The complex effects of ocean acidification on the prominent N2-fixing cyanobacterium Trichodesmium".

scientific article published in September 2017

Community-led, integrated, reproducible multi-omics with anvi'o

scientific article published on 01 January 2021

Draft Genome Sequence of Cyclobacterium marinum Strain Atlantic-IS, Isolated from the Atlantic Slope off the Coast of Virginia, USA

scientific article published on 12 December 2019

Draft Genome Sequences of Bacillus glennii V44-8, Bacillus saganii V47-23a, Bacillus sp. Strain V59.32b, Bacillus sp. Strain MER_TA_151, and Paenibacillus sp. Strain MER_111, Isolated from Cleanrooms Where the Viking and Mars Exploration Rover Space

scientific article published on 25 June 2020

Energy and carbon metabolisms in a deep terrestrial subsurface fluid microbial community.

scientific article published on 23 June 2017

Functional Genomics and Phylogenetic Evidence Suggest Genus-Wide Cobalamin Production by the Globally Distributed Marine Nitrogen Fixer Trichodesmium.

scientific article published on 13 February 2018

Genomic and phenotypic characterization of Burkholderia isolates from the potable water system of the International Space Station

scientific article published on 19 February 2020

Genomic mosaicism underlies the adaptation of marine Synechococcus ecotypes to distinct oceanic iron niches

scientific article published on 15 December 2019

Happy Belly Bioinformatics: an open-source resource dedicated to helping biologists utilize bioinformatics

scientific article published in 2019

Jellyfish Life Stages Shape Associated Microbial Communities, While a Core Microbiome Is Maintained Across All

scientific article published on 12 July 2018

Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content

scientific article published on 12 March 2019

Mechanisms of increased Trichodesmium fitness under iron and phosphorus co-limitation in the present and future ocean

scientific article published on 27 June 2016

Microbial Communities on Seafloor Basalts at Dorado Outcrop Reflect Level of Alteration and Highlight Global Lithic Clades

scientific article

Molecular and physiological evidence of genetic assimilation to high CO2 in the marine nitrogen fixer Trichodesmium

scientific article published on 8 November 2016

Reference-guided metagenomics reveals genome-level evidence of potential microbial transmission from the ISS environment to an astronaut's microbiome

scientific article published in 2021

The Trichodesmium consortium: conserved heterotrophic co-occurrence and genomic signatures of potential interactions.