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List of works by Friedrich Simmel

A Compact DNA Cube with Side Length 10 nm

scientific article published on 21 August 2015

A DNA-based machine that can cyclically bind and release thrombin

scientific article published in July 2004

A Surface-Bound DNA Switch Driven by a Chemical Oscillator

scientific article published on 01 July 2006

A large size-selective DNA nanopore with sensing applications

scientific article published on 11 December 2019

A modular DNA signal translator for the controlled release of a protein by an aptamer

scientific article

A self-assembled nanoscale robotic arm controlled by electric fields.

scientific article published in January 2018

Artificial Gel-based Organelles for Spatial Organization of Cell-free Gene Expression Reactions

article

Artificial cells: crowded genes perform differently

scientific article published in August 2013

Assembly and Microscopic Characterization of DNA Origami Structures ⬇️

scientific article published on 01 January 2012

Assembly and melting of DNA nanotubes from single-sequence tiles

scientific article published on 17 December 2008

Bacterial computing with engineered populations

scientific article published on July 2015

Barcoded DNA origami structures for multiplexed optimization and enrichment of DNA-based protein-binding cavities

scientific article published on 13 July 2020

Building a Synthetic Transcriptional Oscillator

scientific article published in January 2016

Chemical communication between bacteria and cell-free gene expression systems within linear chains of emulsion droplets.

scientific article published on 18 January 2016

Communication and computation by bacteria compartmentalized within microemulsion droplets

scientific article published on 24 December 2013

Comparison of four different particle sizing methods for siRNA polyplex characterization

scientific article published on 16 October 2012

Complex dynamics in a synchronized cell-free genetic clock

scientific article published on 23 May 2022

Controlled trapping and release of quantum dots in a DNA-switchable hydrogel

scientific article published in October 2007

Controlling Chirality across Length Scales using DNA

scientific article published on 20 February 2019

Controlling DNA Polymerization with a Switchable Aptamer

scientific article published on 01 September 2007

Correction to Optimized Assembly of a Multifunctional RNA-Protein Nanostructure in a Cell-Free Gene Expression System

scientific article published on 20 June 2019

DNA Fuel for Free-Running Nanomachines

scientific article published in Physical Review Letters

DNA Nanodevices

scientific article published on 01 March 2005

DNA condensation in one dimension

scientific article published on 8 August 2016

DNA nanostructures interacting with lipid bilayer membranes

scientific article published on 14 May 2014

DNA origami as a nanoscopic ruler for super-resolution microscopy

scientific article published in January 2009

DNA origami cryptography for secure communication

scientific article published on 29 November 2019

DNA origami-based nanoribbons: assembly, length distribution, and twist

scientific article published on 20 May 2011

DNA-based assembly lines and nanofactories ⬇️

scientific article published on 09 January 2012

DNA-based self-assembly of chiral plasmonic nanostructures with tailored optical response

scientific article published in Nature

De novo-designed translation-repressing riboregulators for multi-input cellular logic

scientific article published on 04 November 2019

Determination of DNA Melting Temperatures in Diffusion-Generated Chemical Gradients

scientific article published on 12 June 2007

Diffusive transport of molecular cargo tethered to a DNA origami platform

scientific article published on 9 March 2015

Distance dependence of single-fluorophore quenching by gold nanoparticles studied on DNA origami

scientific article

Diversity in the dynamical behaviour of a compartmentalized programmable biochemical oscillator.

scientific article published on 16 February 2014

Electrophoretic Time-of-Flight Measurements of Single DNA Molecules with Two Stacked Nanopores

scientific article published on 13 October 2011

Electrotransfection of Polyamine Folded DNA Origami Structures

scientific article published on 12 September 2016

Enhanced Efficiency of an Enzyme Cascade on DNA-Activated Silica Surfaces

scientific article published on 27 November 2018

Establishing Communication Between Artificial Cells

scientific article published on 02 August 2019

Filamentation and restoration of normal growth in Escherichia coli using a combined CRISPRi sgRNA/antisense RNA approach

scientific article published in PLoS ONE

Fluorescent Nanocrystals as Colloidal Probes in Complex Fluids Measured by Fluorescence Correlation Spectroscopy

scientific article published on 01 October 2005

Foreword

From DNA nanotechnology to synthetic biology

scientific article

Gene Expression on DNA Biochips Patterned with Strand-Displacement Lithography

scientific article published on 22 February 2018

Hydrophobic Actuation of a DNA Origami Bilayer Structure

scientific article published on 11 March 2014

Kinetics of protein-release by an aptamer-based DNA nanodevice

scientific article published in January 2007

Long-range movement of large mechanically interlocked DNA nanostructures

scientific article

Membrane-assisted growth of DNA origami nanostructure arrays

scientific article

Molecular transport through large-diameter DNA nanopores

scientific article

Nanopore Translocation and Force Spectroscopy Experiments in Microemulsion Droplets

scientific article published on 01 January 2010

Nanopore force spectroscopy of aptamer-ligand complexes

scientific article published on September 2013

Nanopores suggest a negligible influence of CpG methylation on nucleosome packaging and stability

scientific article

Nanoscale imaging in DNA nanotechnology

scientific article

Nanotechnology: deadly DNA.

scientific article published in January 2015

Nucleic acid based molecular devices

scientific article published on March 2011

On-chip functionalization of carbon nanotubes with photosystem I.

scientific article published in March 2010

Operation kinetics of a DNA-based molecular switch

scientific article published in June 2002

Optimized Assembly of a Multifunctional RNA-Protein Nanostructure in a Cell-Free Gene Expression System

article

Orthogonal Protein Assembly on DNA Nanostructures Using Relaxases

scientific article published on 24 February 2016

Out-of-Plane Aptamer Functionalization of RNA Three-Helix Tiles.

scientific article published on 2 April 2019

Partitioning Variability of a Compartmentalized In Vitro Transcriptional Thresholding Circuit

scientific article published on 22 May 2015

Periodic DNA nanotemplates synthesized by rolling circle amplification

scientific article

Periodic Operation of a Dynamic DNA Origami Structure Utilizing the Hydrophilic-Hydrophobic Phase-Transition of Stimulus-Sensitive Polypeptides

scientific article published on 18 September 2019

Polyaniline nanowire synthesis templated by DNA

Principles and Applications of Nucleic Acid Strand Displacement Reactions

scientific article published on 04 February 2019

Probing DNA–Lipid Membrane Interactions with a Lipopeptide Nanopore

scientific article published on 28 March 2012

Probing whole cell currents in high-frequency electrical fields: Identification of thermal effects

scientific article published on 16 September 2007

Processive motion of bipedal DNA walkers

scientific article

Programming Diffusion and Localization of DNA Signals in 3D-Printed DNA-Functionalized Hydrogels

scientific article published on 29 June 2020

Programming the Dynamics of Biochemical Reaction Networks ⬇️

scientific article published on January 7, 2013

Quantitative analysis of single particle trajectories: mean maximal excursion method

scientific article

Quantitative analysis of the nanopore translocation dynamics of simple structured polynucleotides

scientific article published on 3 January 2012

Riboswitch-inspired toehold riboregulators for gene regulation in <i>Escherichia coli</i>

scientific article published in 2022

Robustness of Localized DNA Strand Displacement Cascades

scientific article published on 01 August 2014

Self-Propulsion Strategies for Artificial Cell-Like Compartments

scientific article published on 25 November 2019

Sequence-dependent unfolding kinetics of DNA hairpins studied by nanopore force spectroscopy

scientific article published on 29 October 2010

Signalling and differentiation in emulsion-based multi-compartmentalized in vitro gene circuits

scientific article published on 26 November 2018

Single Cell Analysis of a Bacterial Sender-Receiver System

scientific article published on 25 January 2016

Single Cell Characterization of a Synthetic Bacterial Clock with a Hybrid Feedback Loop Containing dCas9-sgRNA

scientific article published on 24 November 2020

Single molecule characterization of DNA binding and strand displacement reactions on lithographic DNA origami microarrays

scientific article published on 12 February 2014

Single-Pair FRET Characterization of DNA Tweezers

scientific article published on 01 December 2006

Single-molecule kinetics and super-resolution microscopy by fluorescence imaging of transient binding on DNA origami

scientific article

Solving mazes with single-molecule DNA navigators

scientific article published on 05 November 2018

Structural DNA Nanotechnology: From Bases to Bricks, From Structure to Function

Surface-Assisted Large-Scale Ordering of DNA Origami Tiles

scientific article published on 04 June 2014

Switching the activity of Cas12a using guide RNA strand displacement circuits

scientific article published on 07 May 2019

Switching the conformation of a DNA molecule with a chemical oscillator

scientific article

Synthetic in vitro transcription circuits ⬇️

scientific article published on March 1, 2012

Synthetic lipid membrane channels formed by designed DNA nanostructures

scientific article

The optoelectronic properties of a photosystem I-carbon nanotube hybrid system

scientific article published on 4 August 2009

Three-dimensional nanoconstruction with DNA.

scientific article published on January 2008

Timing molecular motion and production with a synthetic transcriptional clock

scientific article

Towards biomedical applications for nucleic acid nanodevices

scientific article published on December 2007

Towards synthetic cells using peptide-based reaction compartments

scientific article published in Nature Communications

Using gene regulation to program DNA-based molecular devices.

scientific article published in July 2005

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