List of works by Babu Valliyodan

A Bayesian model for detection of high-order interactions among genetic variants in genome-wide association studies

scientific article published on 25 November 2015

A Sweetpotato Geranylgeranyl Pyrophosphate Synthase Gene, IbGGPS, Increases Carotenoid Content and Enhances Osmotic Stress Tolerance in Arabidopsis thaliana

scientific article published on 16 September 2015

A major natural genetic variation associated with root system architecture and plasticity improves waterlogging tolerance and yield in soybean.

scientific article published on 8 March 2018

A reference-grade wild soybean genome

scientific article published on 14 March 2019

Adapting legume crops to climate change using genomic approaches.

scientific article published on 30 March 2018

Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects

scientific article (publication date: 2015)

Biological Mechanisms that Influence Soy Protein Concentration and Composition

article

Cloning, functional expression and phylogenetic analysis of plant sterol 24C-methyltransferases involved in sitosterol biosynthesis

scientific article published on 8 October 2009

Comparative analysis of the drought-responsive transcriptome in soybean lines contrasting for canopy wilting

scientific article

Comparative genome analysis to identify SNPs associated with high oleic acid and elevated protein content in soybean

scientific article published on 24 January 2018

Comprehensive Analysis of the Soybean (Glycine max) GmLAX Auxin Transporter Gene Family

scientific article published on 9 March 2016

Construction and comparison of three reference-quality genome assemblies for soybean

scientific article published on 28 October 2019

Dissecting genomic hotspots underlying seed protein, oil, and sucrose content in an interspecific mapping population of soybean using high-density linkage mapping

scientific article published on 16 May 2018

Erratum: Genome sequence of the palaeopolyploid soybean

scientific article published in Nature

Evaluation of candidate reference genes for normalization of quantitative RT-PCR in soybean tissues under various abiotic stress conditions

scientific article

Evaluation of genetic variation among Brazilian soybean cultivars through genome resequencing.

scientific article published on 13 February 2016

Evaluation of high yielding soybean germplasm under water limitation

scientific article

Expanding Omics Resources for Improvement of Soybean Seed Composition Traits

scientific article

Expression of root-related transcription factors associated with flooding tolerance of soybean (Glycine max)

scientific article

Functional analysis of water stress-responsive soybean GmNAC003 and GmNAC004 transcription factors in lateral root development in arabidopsis ⬇️

scientific article published on 23 January 2014

Genetic Diversity of Root System Architecture in Response to Drought Stress in Grain Legumes

scientific article published on 7 March 2018

Genetic diversity and genomic strategies for improving drought and waterlogging tolerance in soybeans.

scientific article published on 7 December 2016

Genetic variants in root architecture-related genes in a Glycine soja accession, a potential resource to improve cultivated soybean

scientific article

Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing

publication published on 08 February 2021

Genome sequence of the palaeopolyploid soybean

scientific article

Genome-wide analysis and expression profiling of the PIN auxin transporter gene family in soybean (Glycine max)

scientific article published on 16 November 2015

Genome-wide expression analysis of soybean NF-Y genes reveals potential function in development and drought response

scientific article published on 27 December 2014

Genome-wide transcriptome analysis of soybean primary root under varying water-deficit conditions

scientific article published on 15 January 2016

Genomic differences between cultivated soybean, G. max and its wild relative G. soja

scientific article

Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean

scientific article published on 19 January 2016

Genomic-assisted phylogenetic analysis and marker development for next generation soybean cyst nematode resistance breeding

scientific article published on 28 August 2015

Genomics Approaches To Soybean Improvement

Global agricultural intensification during climate change: a role for genomics

scientific article published in April 2016

Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003

scientific article published on 09 February 2022

Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq

scientific article published on 19 July 2016

Identification and characterization of a stachyose synthase gene controlling reduced stachyose content in soybean

scientific article

Integrating omic approaches for abiotic stress tolerance in soybean

scientific article

Landscape of genomic diversity and trait discovery in soybean

scientific article published on 31 March 2016

Metabolic engineering of soybean affords improved phytosterol seed traits

article

Molecular and genetic bases of heat stress responses in crop plants and breeding for increased resilience and productivity

scientific article published on 23 January 2020

Molecular characterization of Glycine max squalene synthase genes in seed phytosterol biosynthesis

scientific article

Molecular characterization of stress-inducible GmNAC genes in soybean

scientific article published on 11 March 2009

Neglecting legumes has compromised human health and sustainable food production ⬇️

scientific article

Overexpression of AtDREB1D transcription factor improves drought tolerance in soybean

scientific article published on 6 September 2014

PGen: large-scale genomic variations analysis workflow and browser in SoyKB.

scientific article

Regulation of growth response to water stress in the soybean primary root. I. Proteomic analysis reveals region-specific regulation of phenylpropanoid metabolism and control of free iron in the elongation zone

scientific article

Root xylem plasticity to improve water use and yield in water-stressed soybean

scientific article

Single feature polymorphism discovery in rice

scientific article

Small RNA profiles in soybean primary root tips under water deficit

scientific article (publication date: 5 December 2016)

SoyDB: a knowledge database of soybean transcription factors

scientific article

SoyMetDB: The soybean metabolome database

Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis

scientific article published on 11 July 2015

Soybean Knowledge Base (SoyKB): a web resource for soybean translational genomics

scientific article

Soybean TIP Gene Family Analysis and Characterization of GmTIP1;5 and GmTIP2;5 Water Transport Activity

scientific article published on 21 October 2016

Soybean transcription factor ORFeome associated with drought resistance: a valuable resource to accelerate research on abiotic stress resistance

scientific article published on 13 August 2015

Spatial distribution of transcript changes in the maize primary root elongation zone at low water potential

scientific article

Structural and functional analyses of the wheat genomes based on expressed sequence tags (ESTs) related to abiotic stresses.

scientific article

The MsPRP2 promoter enables strong heterologous gene expression in a root-specific manner and is enhanced by overexpression of Alfin 1.

scientific article published on 4 June 2004

The importance of slow canopy wilting in drought tolerance in soybean

scientific article published on 01 January 2020

Understanding abiotic stress tolerance mechanisms in soybean: a comparative evaluation of soybean response to drought and flooding stress

scientific article published on 20 November 2014

Understanding genetic control of root system architecture in soybean: Insights into the genetic basis of lateral root number

scientific article published on 15 June 2018

Understanding regulatory networks and engineering for enhanced drought tolerance in plants

scientific article

Whole-genome re-sequencing reveals the impact of the interaction of copy number variants of the rhg1 and Rhg4 genes on broad-based resistance to soybean cyst nematode

scientific article published on 20 February 2019

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