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List of works by Nathan A Ahlgren

Alignment-free $d_2^*$ oligonucleotide frequency dissimilarity measure improves prediction of hosts from metagenomically-derived viral sequences.

scientific article

Aryl-homoserine lactone quorum sensing in stem-nodulating photosynthetic bradyrhizobia

scientific article

Characterization of IS1676 from Rhodococcus erythropolis SQ1.

scientific article published on November 1999

Co-occurring Synechococcus ecotypes occupy four major oceanic regimes defined by temperature, macronutrients and iron

scientific article published on 24 July 2015

Discovery of several novel, widespread, and ecologically distinct marine Thaumarchaeota viruses that encode amoC nitrification genes

article

Diverse Marine T4-like Cyanophage Communities Are Primarily Comprised of Low-Abundance Species Including Species with Distinct Seasonal, Persistent, Occasional, or Sporadic Dynamics

scientific article published in 2023

Genome Sequences of Synechococcus sp. Strain MIT S9220 and Cocultured Cyanophage SynMITS9220M01

scientific article published on 23 July 2020

Genome and epigenome of a novel marine Thaumarchaeota strain suggest viral infection, phosphorothioation DNA modification and multiple restriction systems.

scientific article published on 18 April 2017

Genomic mosaicism underlies the adaptation of marine Synechococcus ecotypes to distinct oceanic iron niches

scientific article published on 15 December 2019

Long-term stability and Red Queen-like strain dynamics in marine viruses

scientific article published on 09 December 2019

Measurement of Prochlorococcus ecotypes using real-time polymerase chain reaction reveals different abundances of genotypes with similar light physiologies

scientific article published in March 2006

Multi-year dynamics of fine-scale marine cyanobacterial populations are more strongly explained by phage interactions than abiotic, bottom-up factors

scientific article published on 18 June 2019

Prediction of virus-host infectious association by supervised learning methods.

scientific article

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

scientific article

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