List of works - Georgii A. Bazykin

APOBEC-induced mutations in human cancers are strongly enriched on the lagging DNA strand during replication

scientific article published on 11 January 2016

APOBEC3A/B-induced mutagenesis is responsible for 20% of heritable mutations in the TpCpW context

scientific article published on 9 December 2016

Accurate fetal variant calling in the presence of maternal cell contamination

scientific article published on 29 July 2020

Adaptive evolution at mRNA editing sites in soft-bodied cephalopods

scientific article published on 27 November 2020

Allele-specific nonstationarity in evolution of influenza A virus surface proteins

scientific article published on 02 October 2019

Alternative translation start sites are conserved in eukaryotic genomes.

scientific article

Architecture of Parallel Adaptation in Ten Lacustrine Threespine Stickleback Populations from the White Sea Area

scientific article published on 01 September 2019

Are Nonsense Alleles of Drosophila melanogaster Genes under Any Selection?

scientific article published on 7 February 2018

Bursts of amino acid replacements in protein evolution

scientific article published on 27 March 2019

Bursts of nonsynonymous substitutions in HIV-1 evolution reveal instances of positive selection at conservative protein sites

scholarly article

Changing preferences: deformation of single position amino acid fitness landscapes and evolution of proteins

scientific article

Comparative genomics of transcriptional regulation in yeasts and its application to identification of a candidate alpha-isopropylmalate transporter.

scientific article published in October 2006

Compensatory Evolution of Intrinsic Transcription Terminators in Bacillus Cereus.

scientific article published on 14 February 2017

Complex Selection on Human Polyadenylation Signals Revealed by Polymorphism and Divergence Data

scientific article

Complex fitness landscape shapes variation in a hyperpolymorphic species

scientific article published on 09 May 2022

Coordinated Evolution of Influenza A Surface Proteins

scientific article

Correlated Evolution of Nucleotide Positions within Splice Sites in Mammals.

scientific article published on 7 December 2015

Detecting past positive selection through ongoing negative selection.

scientific article published on 22 August 2011

Directionality in the evolution of influenza A haemagglutinin

scientific article published on 01 November 2008

Directionality in the evolution of influenza A haemagglutinin.

scientific article

Error-prone bypass of DNA lesions during lagging-strand replication is a common source of germline and cancer mutations

scientific article published on 03 December 2018

Evolution of Local Mutation Rate and Its Determinants

scientific article

Evolution of prokaryotic genes by shift of stop codons.

scientific article published on 17 November 2010

Extraordinary Genetic Diversity in a Wood Decay Mushroom

scientific article

Fast evolution from precast bricks: genomics of young freshwater populations of threespine stickleback Gasterosteus aculeatus.

scientific article

Fitness Consequences of Advanced Ancestral Age over Three Generations in Humans

scientific article published on June 2015

Fitness conferred by replaced amino acids declines with time ⬇️

scientific article published on May 23, 2012

Functional implications of splicing polymorphisms in the human genome.

scientific article published on 2 May 2013

Gene age predicts the strength of purifying selection acting on gene expression variation in humans

scientific article

Genetics of Adaptation of the Ascomycetous Fungus Podospora anserina to Submerged Cultivation

scientific article published on 01 October 2019

Genome-Level Analysis of Selective Constraint without Apparent Sequence Conservation.

scientific article published on January 2013

Genomic epidemiology of the early stages of the SARS-CoV-2 outbreak in Russia

scientific article published on 28 January 2021

Genomic signatures of recombination in a natural population of the bdelloid rotifer Adineta vaga

scientific article published on 18 December 2020

Heterogeneity of the transition/transversion ratio in Drosophila and Hominidae genomes.

scientific article published on 15 February 2012

Human mismatch repair system balances mutation rates between strands by removing more mismatches from the lagging strand

scientific article published on 16 May 2017

Insertions and deletions trigger adaptive walks in Drosophila proteins.

scientific article published on 28 March 2012

Intrasubtype reassortments cause adaptive amino acid replacements in H3N2 influenza genes

scientific article

Major role of positive selection in the evolution of conservative segments ofDrosophilaproteins ⬇️

scientific article published on June 6, 2012

Matching population diversity of rhizobial nodA and legume NFR5 genes in plant-microbe symbiosis

scientific article published on 30 August 2019

Negative selection in humans and fruit flies involves synergistic epistasis.

scientific article

Parallel Evolution of Metazoan Mitochondrial Proteins.

scientific article published on 8 June 2017

Phylogenetic inference of changes in amino acid propensities with single-position resolution

scientific article published on 18 February 2022

Polymerase ζ Activity Is Linked to Replication Timing in Humans: Evidence from Mutational Signatures.

scientific article published on 15 September 2015

Positive selection at sites of multiple amino acid replacements since rat–mouse divergence

scientific article published in Nature

Prevalence of epistasis in the evolution of influenza A surface proteins

scientific article

Prevalence of loss-of-function alleles does not correlate with lifetime fecundity and other life-history traits in metazoans.

scientific article published on 2 March 2018

Prevalence of multinucleotide replacements in evolution of primates and Drosophila.

scientific article published on 27 February 2013

Rate of promoter class turn-over in yeast evolution

scientific article published on 10 February 2006

Senescence and entrenchment in evolution of amino acid sites

scientific article published on 14 September 2020

Short indels are subject to insertion-biased gene conversion

scientific article published on 11 May 2013

Slightly deleterious genomic variants and transcriptome perturbations in Down syndrome embryonic selection

scientific article

Strong mutational bias toward deletions in the Drosophila melanogaster genome is compensated by selection

scientific article

Substitutions into amino acids that are pathogenic in human mitochondrial proteins are more frequent in lineages closely related to human than in distant lineages.

scientific article published on 12 December 2017

Transcriptome-based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection

scientific article

Weak negative and positive selection and the drift load at splice sites

scientific article

List of works by Georgii A. Bazykin

APOBEC-induced mutations in human cancers are strongly enriched on the lagging DNA strand during replication

APOBEC3A/B-induced mutagenesis is responsible for 20% of heritable mutations in the TpCpW context

Accurate fetal variant calling in the presence of maternal cell contamination

Adaptive evolution at mRNA editing sites in soft-bodied cephalopods

Allele-specific nonstationarity in evolution of influenza A virus surface proteins

Alternative translation start sites are conserved in eukaryotic genomes.

Architecture of Parallel Adaptation in Ten Lacustrine Threespine Stickleback Populations from the White Sea Area

Are Nonsense Alleles of Drosophila melanogaster Genes under Any Selection?

Bursts of amino acid replacements in protein evolution

Bursts of nonsynonymous substitutions in HIV-1 evolution reveal instances of positive selection at conservative protein sites

Changing preferences: deformation of single position amino acid fitness landscapes and evolution of proteins

Comparative genomics of transcriptional regulation in yeasts and its application to identification of a candidate alpha-isopropylmalate transporter.

Compensatory Evolution of Intrinsic Transcription Terminators in Bacillus Cereus.

Complex Selection on Human Polyadenylation Signals Revealed by Polymorphism and Divergence Data

Complex fitness landscape shapes variation in a hyperpolymorphic species

Coordinated Evolution of Influenza A Surface Proteins

Correlated Evolution of Nucleotide Positions within Splice Sites in Mammals.

Detecting past positive selection through ongoing negative selection.

Directionality in the evolution of influenza A haemagglutinin

Directionality in the evolution of influenza A haemagglutinin.

Error-prone bypass of DNA lesions during lagging-strand replication is a common source of germline and cancer mutations

Evolution of Local Mutation Rate and Its Determinants

Evolution of prokaryotic genes by shift of stop codons.

Extraordinary Genetic Diversity in a Wood Decay Mushroom

Fast evolution from precast bricks: genomics of young freshwater populations of threespine stickleback Gasterosteus aculeatus.

Fitness Consequences of Advanced Ancestral Age over Three Generations in Humans

Fitness conferred by replaced amino acids declines with time ⬇️

Functional implications of splicing polymorphisms in the human genome.

Gene age predicts the strength of purifying selection acting on gene expression variation in humans

Genetics of Adaptation of the Ascomycetous Fungus Podospora anserina to Submerged Cultivation

Genome-Level Analysis of Selective Constraint without Apparent Sequence Conservation.

Genomic epidemiology of the early stages of the SARS-CoV-2 outbreak in Russia

Genomic signatures of recombination in a natural population of the bdelloid rotifer Adineta vaga

Heterogeneity of the transition/transversion ratio in Drosophila and Hominidae genomes.

Human mismatch repair system balances mutation rates between strands by removing more mismatches from the lagging strand

Insertions and deletions trigger adaptive walks in Drosophila proteins.

Intrasubtype reassortments cause adaptive amino acid replacements in H3N2 influenza genes

Major role of positive selection in the evolution of conservative segments ofDrosophilaproteins ⬇️

Matching population diversity of rhizobial nodA and legume NFR5 genes in plant-microbe symbiosis

Negative selection in humans and fruit flies involves synergistic epistasis.

Parallel Evolution of Metazoan Mitochondrial Proteins.

Phylogenetic inference of changes in amino acid propensities with single-position resolution

Polymerase ζ Activity Is Linked to Replication Timing in Humans: Evidence from Mutational Signatures.

Positive selection at sites of multiple amino acid replacements since rat–mouse divergence

Prevalence of epistasis in the evolution of influenza A surface proteins

Prevalence of loss-of-function alleles does not correlate with lifetime fecundity and other life-history traits in metazoans.

Prevalence of multinucleotide replacements in evolution of primates and Drosophila.

Rate of promoter class turn-over in yeast evolution

Senescence and entrenchment in evolution of amino acid sites

Short indels are subject to insertion-biased gene conversion

Slightly deleterious genomic variants and transcriptome perturbations in Down syndrome embryonic selection

Strong mutational bias toward deletions in the Drosophila melanogaster genome is compensated by selection

Substitutions into amino acids that are pathogenic in human mitochondrial proteins are more frequent in lineages closely related to human than in distant lineages.

Transcriptome-based phylogeny of endemic Lake Baikal amphipod species flock: fast speciation accompanied by frequent episodes of positive selection

Weak negative and positive selection and the drift load at splice sites