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Authors whose works are in public domain in at least one jurisdiction

List of works by Aurélien Nald

A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties

article

Contribution of ROS and metabolic status to neonatal and adult CD8+ T cell activation

scientific article published on 16 December 2019

Cooperative development of logical modelling standards and tools with CoLoMoTo

scientific article published on 25 January 2015

Cooperative development of logical modelling standards and tools with CoLoMoTo

article

Decision Diagrams for the Representation and Analysis of Logical Models of Genetic Networks

article

Diversity and Plasticity of Th Cell Types Predicted from Regulatory Network Modelling ⬇️

scientific article published on September 2, 2010

Dynamical analysis of a generic Boolean model for the control of the mammalian cell cycle.

scientific article published on July 2006

Dynamical modeling and analysis of large cellular regulatory networks.

scientific article published on June 2013

Dynamically consistent reduction of logical regulatory graphs

article

Efficient Handling of Large Signalling-Regulatory Networks by Focusing on Their Core Control

article by Aurélien Nald et al published 2012 in Lecture Notes in Computer Science

GINsim: a software suite for the qualitative modelling, simulation and analysis of regulatory networks

scientific article published on 24 January 2006

Genome-wide analysis of SREBP1 activity around the clock reveals its combined dependency on nutrient and circadian signals

scientific article

Geometric analysis of pathways dynamics: Application to versatility of TGF-β receptors

scientific article published on 21 July 2016

Interplay between SMAD2 and STAT5A is a critical determinant of IL-17A/IL-17F differential expression

scientific article published on 01 April 2021

Logical Modelling of Gene Regulatory Networks with GINsim ⬇️

scientific article published on January 1, 2012

Logical modelling of regulatory networks with GINsim 2.3.

scientific article

Model checking to assess T-helper cell plasticity

scientific article

Modular logical modelling of the budding yeast cell cycle

scientific article published on 31 July 2009

On circuit functionality in Boolean networks

scientific article published on 16 March 2013

Petri net representation of multi-valued logical regulatory graphs

article

Prediction of Mutations to Control Pathways Enabling Tumour Cell Invasion with the CoLoMoTo Interactive Notebook (Tutorial)

Reconstruction and signal propagation analysis of the Syk signaling network in breast cancer cells.

scientific article

SBML Level 3: an extensible format for the exchange and reuse of biological models

scientific article published on 01 August 2020

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

scientific article

Setting the basis of best practices and standards for curation and annotation of logical models in biology-highlights of the [BC]2 2019 CoLoMoTo/SysMod Workshop

scientific article published on 21 April 2020

Symbolic Dynamics of Biochemical Pathways as Finite States Machines

System analysis of cross-talk between nuclear receptors reveals an opposite regulation of the cell cycle by LXR and FXR in human HepaRG liver cells

scientific article published on 22 August 2019

System analysis of the functional cross-talk between PPARα, LXR and FXR in the human HepaRG liver cells

The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks

The Systems Biology Markup Language (SBML) Level 3 Package: Qualitative Models, Version 1, Release 1.

scientific article published on 04 September 2015

The combination of the functionalities of feedback circuits is determinant for the attractors' number and size in pathway-like Boolean networks

scientific article published on 10 February 2017

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