List of works - Pablo Orozco-terWengel

A pragmatic approach for integrating molecular tools into biodiversity conservation

scientific article published on 25 December 2023

Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles

scientific article

Ancient DNA reveals the lost domestication history of South American camelids in Northern Chile and across the Andes

scientific article published in 2021

Ancient and modern DNA reveal dynamics of domestication and cross-continental dispersal of the dromedary

scientific article

Assessment of nematodes in Punjab Urial (Ovis vignei punjabiensis) population in Kalabagh Game Reserve: development of a DNA barcode approach

scholarly article

Authors’ Reply to Letter to the Editor: Continued improvement to genetic diversity indicator for CBD

Comparative transcriptomics reveal conserved impacts of rearing density on immune response of two important aquaculture species

scientific article published on 10 June 2020

Comparing genetic diversity and demographic history in co-distributed wild South American camelids

scientific article published on 30 July 2018

Contrasting effects of acute and chronic stress on the transcriptome, epigenome, and immune response of Atlantic salmon

scientific article published on 13 December 2018

Convergent genomic signatures of domestication in sheep and goats

scientific article published on 6 March 2018

Corrigendum: Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation

scientific article published on 11 January 2017

Cross-amplification of nonspecific microsatellites markers: a useful tool to study endangered/vulnerable species of southern Andes deer.

scientific article

Demography and rapid local adaptation shape Creole cattle genome diversity in the tropics

scientific article published on 18 May 2018

Detection of selection signatures in the genome of a farmed population of anadromous rainbow trout (Oncorhynchus mykiss)

Developmental stability: a major role for cyclin G in drosophila melanogaster

scientific article

Dietary specialization drives multiple independent losses and gains in the bitter taste gene repertoire of Laurasiatherian Mammals

scientific article

Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia

scientific article published on 17 April 2020

Distribution and molecular phylogeny of biliary trematodes (Opisthorchiidae) infecting native Lutra lutra and alien Neovison vison across Europe

scientific article published on 24 November 2015

Domestication of cattle: Two or three events?

scientific article published on 23 July 2018

Draft genome of a biparental beetle species, Lethrus apterus

scientific article published on 26 April 2021

Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation

scientific article

FOO: An Upper-Level Ontology for the Forest Observatory

First extraction of eDNA from tree hole water to detect tree frogs: a simple field method piloted in Madagascar

scientific article published on 26 November 2021

ForestQB: An Adaptive Query Builder to Support Wildlife Research

scientific article published in proceedings of the iswc 2022 posters, demos and industry tracks: from novel ideas to industrial practice

ForestQB: Enhancing Linked Data Exploration through Graphical and Conversational UIs Integration

scientific article published on 29 June 2024

Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure.

scientific article

Genetic Variation in Coat Colour Genes and Provides Insights Into Domestication and Management of South American Camelids

article

Genetic diversity and parasite facilitated establishment of the invasive signal crayfish (Pacifastacus leniusculus) in Great Britain ⬇️

scientific article published on 30 July 2018

Genetic identification of units for conservation in tomato frogs, genus Dyscophus

Genomic selection strategies for breeding adaptation and production in dairy cattle under climate change

scientific article published on 18 March 2019

Genomic signatures of adaptive introgression from European mouflon into domestic sheep

scientific article published on 08 August 2017

High mitochondrial differentiation levels between wild and domestic Bactrian camels: a basis for rapid detection of maternal hybridization.

scientific article

High performance computation of landscape genomic models including local indicators of spatial association. ⬇️

scientific article published on November 2016

Hybridization masks speciation in the evolutionary history of the Galápagos marine iguana

scientific article published in June 2015

Isolation and characterization of six polymorphic microsatellite loci for the Malagasy spider tortoise, Pyxis arachnoides and cross-amplification in Pyxis planicauda

Landscape Genomics of a Widely Distributed Snake, Dolichophis caspius (Gmelin, 1789) across Eastern Europe and Western Asia

scientific article published on 17 October 2020

Lessons learnt on the analysis of large sequence data in animal genomics.

scientific article published on 6 April 2018

Living on a volcano's edge: genetic isolation of an extremophile terrestrial metazoan.

scientific article published on 18 September 2013

Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development

scientific article published on 27 April 2011

Long-term sky islands generate highly divergent lineages of a narrowly distributed stream salamander (Pachyhynobius shangchengensis) in mid-latitude mountains of East Asia

article

Maintenance of genetic diversity in an introduced island population of guanacos after seven decades and two severe demographic bottlenecks: implications for camelid conservation.

scientific article

Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments

scientific article

Microsatellite Analysis of the Spectacled Bear (Tremarctos ornatus) Across its Range Distribution

scientific article published on 01 February 2005

Mike Bruford (1963–2023)

scientific article published in 2023

Mitochondrial Introgression, Color Pattern Variation, and Severe Demographic Bottlenecks in Three Species of Malagasy Poison Frogs, Genus Mantella

scientific article published on 23 April 2019

Mitochondrial introgressive hybridization following a demographic expansion in the tomato frogs of Madagascar, genus Dyscophus

scientific article

Mixed signals from hybrid genomes

scientific article published in August 2014

Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species

erratum

Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species.

scientific article

No signs of inbreeding despite long-term isolation and habitat fragmentation in the critically endangered Montseny brook newt (Calotriton arnoldi).

scientific article published on 11 January 2017

Nuclear DNA recapitulates the cryptic mitochondrial lineages ofLumbricus rubellusand suggests the existence of cryptic species in an ecotoxological soil sentinel

article published in 2013

Optimising recovery of DNA from minimally-invasive sampling methods: efficacy of buccal swabs, preservation strategy and DNA extraction approaches for amphibian studies

scientific article published on 26 August 2024

Phylogeography and Population Genetics of Vicugna vicugna: Evolution in the Arid Andean High Plateau.

scientific article published on 6 June 2019

Phylogeography and phylogenetic relationships of Malagasy tree and ground boas

scholarly article by Pablo Orozco-terWengel et al published 30 October 2008 in Biological Journal of the Linnean Society

PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila.

scientific article

PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals

scientific article

Population genomics of wild Chinese rhesus macaques reveals a dynamic demographic history and local adaptation, with implications for biomedical research

article

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025

scientific article

Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana

scientific article published on 28 April 2013

Rapid identification and interpretation of gene-environment associations using the new R.SamBada landscape genomics pipeline

scientific article published on 24 June 2019

Refugia in Patagonian fjords and the eastern Andes during the Last Glacial Maximum revealed by huemul (Hippocamelus bisulcus) phylogeographical patterns and genetic diversity

Revisiting demographic processes in cattle with genome-wide population genetic analysis

scientific article

SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data

scientific article

Simple Rules for an Efficient Use of Geographic Information Systems in Molecular Ecology

scientific article published in 2017

Simple rules for an efficient use of Geographic Information Systems in molecular ecology

Software solutions for the livestock genomics SNP array revolution.

scientific article published on 23 April 2015

Spatial dynamics of Chinese Muntjac related to past and future climate fluctuations

scientific article published in 2021

The Andaman day gecko paradox: an ancient endemic without pronounced phylogeographic structure

scientific article published on 16 July 2020

The complete mitochondrial genome of rare and Critically Endangered Anilany helenae (Microhylidae) of Madagascar

scientific article published on 05 January 2022

The devil is in the details: the effect of population structure on demographic inference

scientific article published on 17 February 2016

Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density

scientific article published on 01 October 2018

Unlocking the potential of a validated single nucleotide polymorphism array for genomic monitoring of trade in cheetahs (Acinonyx jubatus)

scientific article published on 04 December 2020

Using recent genetic history to inform conservation options of two Lesser Caymans iguana (Cyclura nubila caymanensis) populations

scholarly article published on 19 January 2024

An unexpected new red-bellied Stumpffia (Microhylidae) from forest fragments in central Madagascar highlights remaining cryptic diversity

scientific article published on 06 June 2022

List of works by Pablo Orozco-terWengel

A pragmatic approach for integrating molecular tools into biodiversity conservation

Adaptation of Drosophila to a novel laboratory environment reveals temporally heterogeneous trajectories of selected alleles

Ancient DNA reveals the lost domestication history of South American camelids in Northern Chile and across the Andes

Ancient and modern DNA reveal dynamics of domestication and cross-continental dispersal of the dromedary

Assessment of nematodes in Punjab Urial (Ovis vignei punjabiensis) population in Kalabagh Game Reserve: development of a DNA barcode approach

Authors’ Reply to Letter to the Editor: Continued improvement to genetic diversity indicator for CBD

Comparative transcriptomics reveal conserved impacts of rearing density on immune response of two important aquaculture species

Comparing genetic diversity and demographic history in co-distributed wild South American camelids

Contrasting effects of acute and chronic stress on the transcriptome, epigenome, and immune response of Atlantic salmon

Convergent genomic signatures of domestication in sheep and goats

Corrigendum: Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation

Cross-amplification of nonspecific microsatellites markers: a useful tool to study endangered/vulnerable species of southern Andes deer.

Demography and rapid local adaptation shape Creole cattle genome diversity in the tropics

Detection of selection signatures in the genome of a farmed population of anadromous rainbow trout (Oncorhynchus mykiss)

Developmental stability: a major role for cyclin G in drosophila melanogaster

Dietary specialization drives multiple independent losses and gains in the bitter taste gene repertoire of Laurasiatherian Mammals

Dispersal and genetic structure in a tropical small mammal, the Bornean tree shrew (Tupaia longipes), in a fragmented landscape along the Kinabatangan River, Sabah, Malaysia

Distribution and molecular phylogeny of biliary trematodes (Opisthorchiidae) infecting native Lutra lutra and alien Neovison vison across Europe

Domestication of cattle: Two or three events?

Draft genome of a biparental beetle species, Lethrus apterus

Dynamics and genetics of a disease-driven species decline to near extinction: lessons for conservation

FOO: An Upper-Level Ontology for the Forest Observatory

First extraction of eDNA from tree hole water to detect tree frogs: a simple field method piloted in Madagascar

ForestQB: An Adaptive Query Builder to Support Wildlife Research

ForestQB: Enhancing Linked Data Exploration through Graphical and Conversational UIs Integration

Genealogical lineage sorting leads to significant, but incorrect Bayesian multilocus inference of population structure.

Genetic Variation in Coat Colour Genes and Provides Insights Into Domestication and Management of South American Camelids

Genetic diversity and parasite facilitated establishment of the invasive signal crayfish (Pacifastacus leniusculus) in Great Britain ⬇️

Genetic identification of units for conservation in tomato frogs, genus Dyscophus

Genomic selection strategies for breeding adaptation and production in dairy cattle under climate change

Genomic signatures of adaptive introgression from European mouflon into domestic sheep

High mitochondrial differentiation levels between wild and domestic Bactrian camels: a basis for rapid detection of maternal hybridization.

High performance computation of landscape genomic models including local indicators of spatial association. ⬇️

Hybridization masks speciation in the evolutionary history of the Galápagos marine iguana

Isolation and characterization of six polymorphic microsatellite loci for the Malagasy spider tortoise, Pyxis arachnoides and cross-amplification in Pyxis planicauda

Landscape Genomics of a Widely Distributed Snake, Dolichophis caspius (Gmelin, 1789) across Eastern Europe and Western Asia

Lessons learnt on the analysis of large sequence data in animal genomics.

Living on a volcano's edge: genetic isolation of an extremophile terrestrial metazoan.

Locus-dependent selection in crop-wild hybrids of lettuce under field conditions and its implication for GM crop development

Long-term sky islands generate highly divergent lineages of a narrowly distributed stream salamander (Pachyhynobius shangchengensis) in mid-latitude mountains of East Asia

Maintenance of genetic diversity in an introduced island population of guanacos after seven decades and two severe demographic bottlenecks: implications for camelid conservation.

Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments

Microsatellite Analysis of the Spectacled Bear (Tremarctos ornatus) Across its Range Distribution

Mike Bruford (1963–2023)

Mitochondrial Introgression, Color Pattern Variation, and Severe Demographic Bottlenecks in Three Species of Malagasy Poison Frogs, Genus Mantella

Mitochondrial introgressive hybridization following a demographic expansion in the tomato frogs of Madagascar, genus Dyscophus

Mixed signals from hybrid genomes

Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species

Morphometric, Behavioral, and Genomic Evidence for a New Orangutan Species.

No signs of inbreeding despite long-term isolation and habitat fragmentation in the critically endangered Montseny brook newt (Calotriton arnoldi).

Nuclear DNA recapitulates the cryptic mitochondrial lineages ofLumbricus rubellusand suggests the existence of cryptic species in an ecotoxological soil sentinel

Optimising recovery of DNA from minimally-invasive sampling methods: efficacy of buccal swabs, preservation strategy and DNA extraction approaches for amphibian studies

Phylogeography and Population Genetics of Vicugna vicugna: Evolution in the Arid Andean High Plateau.

Phylogeography and phylogenetic relationships of Malagasy tree and ground boas

PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila.

PoPoolation: a toolbox for population genetic analysis of next generation sequencing data from pooled individuals

Population genomics of wild Chinese rhesus macaques reveals a dynamic demographic history and local adaptation, with implications for biomedical research

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025

Radically different phylogeographies and patterns of genetic variation in two European brown frogs, genus Rana

Rapid identification and interpretation of gene-environment associations using the new R.SamBada landscape genomics pipeline

Refugia in Patagonian fjords and the eastern Andes during the Last Glacial Maximum revealed by huemul (Hippocamelus bisulcus) phylogeographical patterns and genetic diversity

Revisiting demographic processes in cattle with genome-wide population genetic analysis

SNeP: a tool to estimate trends in recent effective population size trajectories using genome-wide SNP data

Simple Rules for an Efficient Use of Geographic Information Systems in Molecular Ecology

Simple rules for an efficient use of Geographic Information Systems in molecular ecology

Software solutions for the livestock genomics SNP array revolution.

Spatial dynamics of Chinese Muntjac related to past and future climate fluctuations

The Andaman day gecko paradox: an ancient endemic without pronounced phylogeographic structure

The complete mitochondrial genome of rare and Critically Endangered Anilany helenae (Microhylidae) of Madagascar

The devil is in the details: the effect of population structure on demographic inference

Transcriptomic response to parasite infection in Nile tilapia (Oreochromis niloticus) depends on rearing density

Unlocking the potential of a validated single nucleotide polymorphism array for genomic monitoring of trade in cheetahs (Acinonyx jubatus)

Using recent genetic history to inform conservation options of two Lesser Caymans iguana (Cyclura nubila caymanensis) populations

﻿An unexpected new red-bellied Stumpffia (Microhylidae) from forest fragments in central Madagascar highlights remaining cryptic diversity

An unexpected new red-bellied Stumpffia (Microhylidae) from forest fragments in central Madagascar highlights remaining cryptic diversity