List of works - Forest Rohwer

Viruses in the faecal microbiota of monozygotic twins and their mothers

scientific article

The marine viromes of four oceanic regions

scientific article

Genomic analysis of uncultured marine viral communities

scientific article

Functional metagenomic profiling of nine biomes

scientific article (publication date: 3 April 2008)

Metagenomic analyses of an uncultured viral community from human feces

scientific article published in October 2003

Viral metagenomics

scientific article

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

scientific article

Explaining microbial population genomics through phage predation

scientific article published in November 2009

Here a virus, there a virus, everywhere the same virus?

scientific article published in June 2005

RNA viral community in human feces: prevalence of plant pathogenic viruses

scientific article published in January 2006

The Phage Proteomic Tree: a genome-based taxonomy for phage

scientific article

Viruses manipulate the marine environment

scientific article

Laboratory procedures to generate viral metagenomes

scientific article

Bacteriophage adhering to mucus provide a non-host-derived immunity.

scientific article

Baselines and degradation of coral reefs in the Northern Line Islands.

scientific article

Transfer of photosynthesis genes to and from Prochlorococcus viruses

scientific article

Metagenomics and future perspectives in virus discovery.

scientific article

Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals

scientific article

Metagenomic analysis of stressed coral holobionts

scientific article published on 22 April 2009

Using pyrosequencing to shed light on deep mine microbial ecology

scientific article

Viral and microbial community dynamics in four aquatic environments.

scientific article

Metagenomic analysis of the microbial community associated with the coral Porites astreoides.

scientific article

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil

scientific article published on 7 September 2007

Indirect effects of algae on coral: algae-mediated, microbe-induced coral mortality

scientific article published on 01 July 2006

Microbial ecology of four coral atolls in the Northern Line Islands.

scientific article

Going viral: next-generation sequencing applied to phage populations in the human gut.

scientific article

Global phage diversity

scientific article

Diversity and population structure of a near-shore marine-sediment viral community

scientific article published in March 2004

Multispecies Microbial Mutualisms on Coral Reefs: The Host as a Habitat

scientific article published on October 1, 2003

Phylogenetic classification of short environmental DNA fragments

scientific article (publication date: April 2008)

Biodiversity and biogeography of phages in modern stromatolites and thrombolites.

scientific article

Development and use of personalized bacteriophage-based therapeutic cocktails to treat a patient with a disseminated resistant Acinetobacter baumannii infection

scientific article published on 14 August 2017

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

scientific article

Gnotobiotic mouse model of phage–bacterial host dynamics in the human gut

scientific article published on November 20, 2013

Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome

scientific article published on 8 December 2011

Viral diversity and dynamics in an infant gut.

scientific article

FastGroupII: a web-based bioinformatics platform for analyses of large 16S rDNA libraries

scientific article

New abundant microbial groups in aquatic hypersaline environments

scientific article

Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes

scientific article (publication date: 2011)

TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets

scientific article

Photosystem I gene cassettes are present in marine virus genomes

scientific article

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

scientific article

The airborne metagenome in an indoor urban environment

scientific article

An application of statistics to comparative metagenomics

scientific article published on 20 March 2006

Spatial distribution of microbial communities in the cystic fibrosis lung

scientific article published on July 28, 2011

Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa.

scholarly article

Microbial diversity associated with four functional groups of benthic reef algae and the reef-building coral Montastraea annularis

scientific article

Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico

scientific article

Comparative metagenomics of microbial traits within oceanic viral communities

scientific article

Grinder: a versatile amplicon and shotgun sequence simulator

scientific article

List of works by Forest Rohwer

Viruses in the faecal microbiota of monozygotic twins and their mothers

The marine viromes of four oceanic regions

Genomic analysis of uncultured marine viral communities

Functional metagenomic profiling of nine biomes

Metagenomic analyses of an uncultured viral community from human feces

Viral metagenomics

Three Prochlorococcus cyanophage genomes: signature features and ecological interpretations

Explaining microbial population genomics through phage predation

Here a virus, there a virus, everywhere the same virus?

RNA viral community in human feces: prevalence of plant pathogenic viruses

The Phage Proteomic Tree: a genome-based taxonomy for phage

Viruses manipulate the marine environment

Laboratory procedures to generate viral metagenomes

Bacteriophage adhering to mucus provide a non-host-derived immunity.

Baselines and degradation of coral reefs in the Northern Line Islands.

Transfer of photosynthesis genes to and from Prochlorococcus viruses

Metagenomics and future perspectives in virus discovery.

Metagenomic analysis of respiratory tract DNA viral communities in cystic fibrosis and non-cystic fibrosis individuals

Metagenomic analysis of stressed coral holobionts

Using pyrosequencing to shed light on deep mine microbial ecology

Viral and microbial community dynamics in four aquatic environments.

Metagenomic analysis of the microbial community associated with the coral Porites astreoides.

Metagenomic and small-subunit rRNA analyses reveal the genetic diversity of bacteria, archaea, fungi, and viruses in soil

Indirect effects of algae on coral: algae-mediated, microbe-induced coral mortality

Microbial ecology of four coral atolls in the Northern Line Islands.

Going viral: next-generation sequencing applied to phage populations in the human gut.

Global phage diversity

Diversity and population structure of a near-shore marine-sediment viral community

Multispecies Microbial Mutualisms on Coral Reefs: The Host as a Habitat

Phylogenetic classification of short environmental DNA fragments

Biodiversity and biogeography of phages in modern stromatolites and thrombolites.

Development and use of personalized bacteriophage-based therapeutic cocktails to treat a patient with a disseminated resistant Acinetobacter baumannii infection

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

Gnotobiotic mouse model of phage–bacterial host dynamics in the human gut

Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome

Viral diversity and dynamics in an infant gut.

FastGroupII: a web-based bioinformatics platform for analyses of large 16S rDNA libraries

New abundant microbial groups in aquatic hypersaline environments

Broad surveys of DNA viral diversity obtained through viral metagenomics of mosquitoes

TagCleaner: Identification and removal of tag sequences from genomic and metagenomic datasets

Photosystem I gene cassettes are present in marine virus genomes

PHACCS, an online tool for estimating the structure and diversity of uncultured viral communities using metagenomic information

The airborne metagenome in an indoor urban environment

An application of statistics to comparative metagenomics

Spatial distribution of microbial communities in the cystic fibrosis lung

Metagenomic analysis indicates that stressors induce production of herpes-like viruses in the coral Porites compressa.

Microbial diversity associated with four functional groups of benthic reef algae and the reef-building coral Montastraea annularis

Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico

Comparative metagenomics of microbial traits within oceanic viral communities

Grinder: a versatile amplicon and shotgun sequence simulator