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List of works by Mario Tyago Murakami

A comparative structural analysis reveals distinctive features of co-factor binding and substrate specificity in plant aldo-keto reductases

scientific article published on 3 May 2016

A novel β-glucosidase isolated from the microbial metagenome of Lake Poraquê (Amazon, Brazil).

scientific article published on 15 February 2018

A structure based model for liposome disruption and the role of catalytic activity in myotoxic phospholipase A2s.

scientific article published in December 2003

Active site mapping of Loxosceles phospholipases D: Biochemical and biological features

scientific article published on 24 May 2016

Adenosine Kinase couples sensing of cellular potassium depletion to purine metabolism

scientific article published in Scientific Reports

An actinobacteria lytic polysaccharide monooxygenase acts on both cellulose and xylan to boost biomass saccharification.

scientific article

An engineered GH1 β-glucosidase displays enhanced glucose tolerance and increased sugar release from lignocellulosic materials

scientific article published on 20 March 2019

Bacterial and Arachnid Sphingomyelinases D: Comparison of Biophysical and Pathological Activities.

scientific article published on 3 November 2016

Biophysical Characterization of Alanine Aminotransferase from Trypanosoma cruzi.

scientific article

Calcium and magnesium ions modulate the oligomeric state and function of mitochondrial 2-Cys peroxiredoxins in Leishmania parasites.

scientific article published on 14 March 2017

Characterization of a hexameric exo-acting GH51 α-l-arabinofuranosidase from the mesophilic Bacillus subtilis.

scientific article published in November 2013

Cloning, heterologous expression and biochemical characterization of a non-specific endoglucanase family 12 from Aspergillus terreus NIH2624.

scientific article published on 11 January 2017

Correlation of temperature induced conformation change with optimum catalytic activity in the recombinant G/11 xylanase A from Bacillus subtilis strain 168 (1A1)

scientific article published on 02 November 2005

Crystal Structure and Regulation of the Citrus Pol III Repressor MAF1 by Auxin and Phosphorylation.

scientific article published on 24 July 2017

Crystal structure of β1→6-galactosidase from Bifidobacterium bifidum S17: trimeric architecture, molecular determinants of the enzymatic activity and its inhibition by α-galactose

scientific article

Crystallization and preliminary X-ray crystallographic studies of Protac, a commercial protein C activator isolated from Agkistrodon contortrix contortrix venom

scientific article published on 01 September 2005

Crystallization and preliminary X-ray crystallographic studies of the mesophilic xylanase A from Bacillus subtilis 1A1.

scientific article published on 20 January 2005

Crystallization and preliminary X-ray diffraction analysis of a class II phospholipase D fromLoxosceles intermediavenom

scientific article

Crystallization and preliminary X-ray diffraction analysis of suramin, a highly charged polysulfonated napthylurea, complexed with a myotoxic PLA2 from Bothrops asper venom.

scientific article published in December 2004

Crystallization and preliminary crystallographic analysis of SMase I, a sphingomyelinase from Loxosceles laeta spider venom.

scientific article

Effect of dynamic high pressure on functional and structural properties of bovine serum albumin.

scientific article published on 24 June 2017

Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides

scientific article published on 02 February 2022

In-solution behavior and protective potential of asparagine synthetase A from Trypanosoma cruzi

scientific article published on 15 March 2019

Inhibition of myotoxic activity of Bothrops asper myotoxin II by the anti-trypanosomal drug suramin.

scientific article published in July 2005

Insights into metal ion binding in phospholipases A2: ultra high-resolution crystal structures of an acidic phospholipase A2 in the Ca2+ free and bound states.

scientific article published on 5 December 2005

Myosin Va interacts with the exosomal protein spermine synthase

scientific article published on 01 March 2019

N-glycan Utilization by Bifidobacterium Gut Symbionts Involves a Specialist β-Mannosidase

scientific article published on 11 January 2019

Publisher Correction: Structural insights into β-1,3-glucan cleavage by a glycoside hydrolase family

scientific article published on 25 June 2020

Recent advances in the understanding of brown spider venoms: From the biology of spiders to the molecular mechanisms of toxins

scientific article

Structural basis for metal ion coordination and the catalytic mechanism of sphingomyelinases D

scientific article

Structural basis of exo-β-mannanase activity in the GH2 family

scientific article published on 11 July 2018

Structural insights into the catalytic mechanism of sphingomyelinases D and evolutionary relationship to glycerophosphodiester phosphodiesterases.

scientific article published on 3 February 2006

Structural insights into β-1,3-glucan cleavage by a glycoside hydrolase family

scientific article published on 25 May 2020

Structure and function of a novel GH8 endoglucanase from the bacterial cellulose synthase complex of Raoultella ornithinolytica

scientific article

Structure of a novel class II phospholipase D: catalytic cleft is modified by a disulphide bridge

scientific article

Structure of the polypeptide crotamine from the Brazilian rattlesnakeCrotalus durissus terrificus

scientific article

Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43

scientific article published on 05 February 2019

Targeting Loxosceles spider Sphingomyelinase D with small-molecule inhibitors as a potential therapeutic approach for loxoscelism

scientific article published on 01 December 2019

The Penicillium echinulatum secretome on sugar cane bagasse

scientific article

The accessory domain changes the accessibility and molecular topography of the catalytic interface in monomeric GH39 β-xylosidases ⬇️

scientific article published on September 18, 2012

The dark and bright sides of an enzyme: a three dimensional structure of the N-terminal domain of Zophobas morio luciferase-like enzyme, inferences on the biological function and origin of oxygenase/luciferase activity.

scientific article

The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans

scientific article published on 11 August 2018

The molecular motor Myosin Va interacts with the cilia-centrosomal protein RPGRIP1L.

scientific article published on 07 March 2017

The structure of a native l-amino acid oxidase, the major component of the Vipera ammodytes ammodytes venomic, reveals dynamic active site and quaternary structure stabilization by divalent ions

scientific article published on 11 October 2010

Two distinct catalytic pathways for GH43 xylanolytic enzymes unveiled by X-ray and QM/MM simulations

scientific article published on 14 January 2021

Tyrosine binding and promiscuity in the arginine repressor from the pathogenic bacterium Corynebacterium pseudotuberculosis

scientific article

Xyloglucan processing machinery in Xanthomonas pathogens and its role in the transcriptional activation of virulence factors

scientific article published on 30 June 2021

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