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List of works by Martin R Larsen

A Novel Post-translational Modification in Nerve Terminals: O-LinkedN-Acetylglucosamine Phosphorylation

scientific article published on 02 May 2011

A Systems-level Characterization of the Differentiation of Human Embryonic Stem Cells into Mesenchymal Stem Cells

scientific article published on 22 July 2019

A Targeted LC-MS Strategy for Low-Abundant HLA Class-I-Presented Peptide Detection Identifies Novel Human Papillomavirus T-Cell Epitopes.

scientific article published on 30 March 2018

A novel mass spectrometric strategy "BEMAP" reveals Extensive O-linked protein glycosylation in Enterotoxigenic Escherichia coli

scientific article published on 26 August 2016

A novel method for the simultaneous enrichment, identification, and quantification of phosphopeptides and sialylated glycopeptides applied to a temporal profile of mouse brain development

scientific article

A phosphoproteomics approach to elucidate neuropeptide signal transduction controlling insect metamorphosis

scientific article published on 5 May 2009

Acute Myocardial Infarction and Pulmonary Diseases Result in Two Different Degradation Profiles of Elastin as Quantified by Two Novel ELISAs

scientific article

Ageing and amyloidosis underlie the molecular and pathological alterations of tau in a mouse model of familial Alzheimer's disease

scientific article published on 31 October 2019

Alterations in gamma-actin and tubulin-targeted drug resistance in childhood leukemia

scientific article published on October 2006

Alterations in the Cerebral Microvascular Proteome Expression Profile After Transient Global Cerebral Ischemia in Rat.

scientific article published on 8 December 2016

An integrated proteomics approach shows synaptic plasticity changes in an APP/PS1 Alzheimer's mouse model

scientific article published on 28 April 2016

Analytical strategies for phosphoproteomics

scientific article published on March 2009

Assessment of proteolytic degradation of the basement membrane: a fragment of type IV collagen as a biochemical marker for liver fibrosis

scientific article

Automated N-glycan profiling of a mutant Trypanosoma rangeli sialidase expressed in Pichia pastoris, using tandem mass spectrometry and bioinformatics

scientific article published on 24 August 2015

Battle through signaling between wheat and the fungal pathogen Septoria tritici revealed by proteomics and phosphoproteomics.

scientific article published on 29 May 2013

Biglycan fragmentation in pathologies associated with extracellular matrix remodeling by matrix metalloproteinases

scientific article published on May 2013

CRISPR/Cas9-mediated mutation revealed cytoplasmic tail is dispensable for IZUMO1 function and male fertility

scientific article published on 13 September 2016

Cdk5 is essential for synaptic vesicle endocytosis

scientific journal article

Changes in phosphorylation of myofibrillar proteins during postmortem development of porcine muscle

article

Changes in the muscle proteome after compensatory growth in pigs.

scientific article published in April 2006

Characterization of Macrophage Endogenous S-Nitrosoproteome Using a Cysteine-Specific Phosphonate Adaptable Tag in Combination with TiO2 Chromatography.

scientific article published on 17 January 2018

Characterization of a secreted Chlamydia protease

scientific article

Characterization of differently processed forms of enolase 2 from Saccharomyces cerevisiae by two-dimensional gel electrophoresis and mass spectrometry

scientific article

Characterization of gel-separated glycoproteins using two-step proteolytic digestion combined with sequential microcolumns and mass spectrometry

scientific article

Characterization of human neural differentiation from pluripotent stem cells using proteomics/PTMomics--current state-of-the-art and challenges

scientific article

Characterization of membrane-shed microvesicles from cytokine-stimulated β-cells using proteomics strategies

scientific article

Characterization of purified recombinant Bet v 1 with authentic N-terminus, cloned in fusion with maltose-binding protein

scientific article

Characterization of signaling pathways associated with pancreatic β-cell adaptive flexibility in compensation of obesity-linked diabetes in db/db mice

scientific article published on 07 April 2020

Characterization of the Molecular Mechanisms Underlying Glucose Stimulated Insulin Secretion from Isolated Pancreatic β-cells Using Post-translational Modification Specific Proteomics (PTMomics).

scientific article published on 7 November 2017

Characterization of the human cerebrospinal fluid phosphoproteome by titanium dioxide affinity chromatography and mass spectrometry

scientific article

Characterizing disease-associated changes in post-translational modifications by mass spectrometry

scientific article published on 27 January 2018

Chemical deamidation: a common pitfall in large-scale N-linked glycoproteomic mass spectrometry-based analyses.

scientific article published on 22 February 2012

Chronic low-dose-rate ionising radiation affects the hippocampal phosphoproteome in the ApoE-/- Alzheimer's mouse model

scientific article published on 30 September 2016

Comparative proteome analysis of Chlamydia trachomatis serovar A, D and L2.

scientific article

Comparative proteomics and glycoproteomics reveal increased N-linked glycosylation and relaxed sequon specificity in Campylobacter jejuni NCTC11168 O.

scientific article published on 25 August 2014

Complementing genomics with proteomics: the membrane subproteome of Pseudomonas aeruginosa PAO1.

scientific article published in November 2000

Comprehensive Protocol to Simultaneously Study Protein Phosphorylation, Acetylation, and N-Linked Sialylated Glycosylation

Comprehensive glycoprofiling of the epimastigote and trypomastigote stages of Trypanosoma cruzi

scientific article published on 15 June 2016

Comprehensive quantitative comparison of the membrane proteome, phosphoproteome, and sialiome of human embryonic and neural stem cells

scientific article published on 30 October 2013

Convergent Akt activation drives acquired EGFR inhibitor resistance in lung cancer

scientific article published on 4 September 2017

Cytokine- or chemically derived nitric oxide alters the expression of proteins detected by two-dimensional gel electrophoresis in neonatal rat islets of Langerhans

scientific article published in November 2000

Depolarization-dependent induction of site-specific changes in sialylation on N-linked glycoproteins in rat nerve terminals

scientific article published on 09 June 2020

Development of a Neo-Epitope Specific Assay for Serological Assessment of Type VII Collagen Turnover and Its Relevance in Fibroproliferative Disorders

scientific article published in March 2018

Development of a Trypanosoma cruzi strain typing assay using MS2 peptide spectral libraries (Tc-STAMS2).

scientific article published on 2 April 2018

Development of a screening method to assess flood risk on danish national roads and highway systems

scientific article

Distinct urinary glycoprotein signatures in prostate cancer patients

Diversity within the O-linked protein glycosylation systems of acinetobacter species

scientific article

Dynamic Changes in the Protein Localization in the Nuclear Environment in Pancreatic β-Cell after Brief Glucose Stimulation.

scientific article published on 8 March 2018

Dynamic cofilin phosphorylation in the control of lamellipodial actin homeostasis

scientific article published on 15 May 2007

Elucidation of Altered Pathways in Tumor-Initiating Cells of Triple-Negative Breast Cancer: A Useful Cell Model System for Drug Screening

scientific article published on 10 June 2017

Elucidation of epithelial-mesenchymal transition-related pathways in a triple-negative breast cancer cell line model by multi-omics interactome analysis.

scientific article published on November 2014

Enrichment and separation of mono- and multiply phosphorylated peptides using sequential elution from IMAC prior to mass spectrometric analysis

scientific article published on January 2009

Evaluation of the impact of some experimental procedures on different phosphopeptide enrichment techniques

scholarly article by Søren S. Jensen & Martin R Larsen published 2007 in Rapid Communications in Mass Spectrometry

Experimental Demyelination and Axonal Loss Are Reduced in MicroRNA-146a Deficient Mice

scientific article published on 12 March 2018

Exploring the Sialiome Using Titanium Dioxide Chromatography and Mass Spectrometry

scholarly article by Martin R Larsen et al published 9 July 2007 in Molecular & Cellular Proteomics

Exploring the intramolecular phosphorylation sites in human Chk2.

scientific article published on 11 September 2008

Expression, purification and characterization of the cancer-germline antigen GAGE12I: a candidate for cancer immunotherapy

scientific article published on 27 May 2010

Extracellular vesicles with altered tetraspanin CD9 and CD151 levels confer increased prostate cell motility and invasion.

scientific article published on 11 June 2018

Gel-based phosphoproteomics analysis of sarcoplasmic proteins in postmortem porcine muscle with pH decline rate and time differences

scientific article

Genetic and proteomic evidences support the localization of yeast enolase in the cell surface

scientific article

Genetic disruption of calpain correlates with loss of membrane blebbing and differential expression of RhoGDI-1, cofilin and tropomyosin

scientific article published in May 2008

Glycomic analysis of gastric carcinoma cells discloses glycans as modulators of RON receptor tyrosine kinase activation in cancer

scientific article published on 22 December 2015

Glycomic and sialoproteomic data of gastric carcinoma cells overexpressing ST3GAL4.

scientific article

Glycoproteomic profile in wine: a 'sweet' molecular renaissance

scientific article

Graphite powder as an alternative or supplement to reversed-phase material for desalting and concentration of peptide mixtures prior to matrix-assisted laser desorption/ionization-mass spectrometry

scientific article

H ferritin gene silencing in a human metastatic melanoma cell line: a proteomic analysis.

scientific article

High-performance hybrid Orbitrap mass spectrometers for quantitative proteome analysis: Observations and implications

article

Highly selective enrichment of phosphorylated peptides from peptide mixtures using titanium dioxide microcolumns.

scientific article

Highly selective enrichment of phosphorylated peptides using titanium dioxide

scientific article published on 01 January 2006

How many human proteoforms are there?

scientific article published in February 2018

Human insulin-like growth factor II leader 2 mediates internal initiation of translation

scientific article (publication date: April 2002)

Identification and Characterization of N-Glycosylated Proteins Using Proteomics

Identification and characterization of a novel Chlamydia trachomatis reticulate body protein

scientific article published on July 2002

Identification of novel protein functions and signaling mechanisms by genetics and quantitative phosphoproteomics in Caenorhabditis elegans

scientific article published in January 2014

Identification of phosphorylation sites in protein kinase A substrates using artificial neural networks and mass spectrometry

scientific article

Immune-mediated beta-cell destruction in vitro and in vivo-A pivotal role for galectin-3

scientific journal article

Important options available--from start to finish--for translating proteomics results to clinical chemistry

scientific article

Improved accuracy of cell surface shaving proteomics in Staphylococcus aureus using a false-positive control

scientific article published in May 2010

Improved detection of hydrophilic phosphopeptides using graphite powder microcolumns and mass spectrometry: evidence for in vivo doubly phosphorylated dynamin I and dynamin III.

scientific article

Improving the Phosphoproteome Coverage for Limited Sample Amounts Using TiO2-SIMAC-HILIC (TiSH) Phosphopeptide Enrichment and Fractionation

scientific article published on January 2016

Integrated proteomics reveals apoptosis-related mechanisms associated with placental malaria

scientific article published on 21 September 2018

Integrated solid-phase extraction-capillary liquid chromatography (speLC) interfaced to ESI-MS/MS for fast characterization and quantification of protein and proteomes.

scientific article

Intrauterine programming of fetal islet gene expression in rats--effects of maternal protein restriction during gestation revealed by proteome analysis.

scientific article

LGR signaling mediates muscle-adipose tissue crosstalk and protects against diet-induced insulin resistance

scientific article published in 2024

MMP mediated degradation of type IV collagen alpha 1 and alpha 3 chains reflects basement membrane remodeling in experimental and clinical fibrosis--validation of two novel biomarker assays

scientific article

MMP mediated degradation of type VI collagen is highly associated with liver fibrosis--identification and validation of a novel biochemical marker assay

scientific article

Mass spectrometric characterization of posttranslationally modified proteins--phosphorylation

scientific article published on 01 January 2004

Mass spectrometric identification and microcharacterization of proteins from electrophoretic gels: strategies and applications

scientific article

Matrix metalloproteinase-9-mediated type III collagen degradation as a novel serological biochemical marker for liver fibrogenesis

scientific article published on October 2010

Measurement of MMP-9 and -12 degraded elastin (ELM) provides unique information on lung tissue degradation

scientific article

Modification of the Campylobacter jejuni N-linked glycan by EptC protein-mediated addition of phosphoethanolamine

scientific article published on 2 July 2012

Modulation of protein phosphorylation, N-glycosylation and Lys-acetylation in grape (Vitis vinifera) mesocarp and exocarp owing to Lobesia botrana infection

scientific article

Molecular characterization of covalent complexes between tissue transglutaminase and gliadin peptides

scientific article

Multidimensional Strategy for Sensitive Phosphoproteomics Incorporating Protein Prefractionation Combined with SIMAC, HILIC, and TiO2Chromatography Applied to Proximal EGF Signaling

NS1 codon usage adaptation to humans in pandemic Zika virus.

scientific article published on 10 May 2018

Neuronal process structure and growth proteins are targets of heavy PTM regulation during brain development

scientific article published on 18 February 2014

Novel protein phosphorylation site identification in spinach stroma membranes by titanium dioxide microcolumns and tandem mass spectrometry

scientific article

Omics-Based Approach Reveals Complement-Mediated Inflammation in Chronic Lymphocytic Inflammation With Pontine Perivascular Enhancement Responsive to Steroids (CLIPPERS).

scientific article published on 23 April 2018

Performance of isobaric and isotopic labeling in quantitative plant proteomics

scientific article published on 9 April 2012

Phospho-proteomics: evaluation of the use of enzymatic de-phosphorylation and differential mass spectrometric peptide mass mapping for site specific phosphorylation assignment in proteins separated by gel electrophoresis

scientific article

Phosphopeptide Enrichment by Immobilized Metal Affinity Chromatography

scientific article published in January 2016

Phosphorylation of both nucleoplasmin domains is required for activation of its chromatin decondensation activity

scientific article

Phosphorylation of dynamin I on Ser-795 by protein kinase C blocks its association with phospholipids

scientific article

Phosphorylation of dynamin II at serine-764 is associated with cytokinesis

scientific article published on 29 December 2010

Phosphorylation of the regulatory beta-subunit of protein kinase CK2 by checkpoint kinase Chk1: identification of the in vitro CK2beta phosphorylation site

scientific article

Photolabeling identifies an interaction between phosphatidylcholine and glycerol-3-phosphate dehydrogenase (Gut2p) in yeast mitochondria

scientific article published in May 2002

Plasma proteome profiling of atherosclerotic disease manifestations reveals elevated levels of the cytoskeletal protein vinculin

scientific article published on 22 December 2013

Post-translational modifications of the extracellular matrix are key events in cancer progression: Opportunities for biochemical marker development

scientific article published on May 1, 2011

Postmortem Changes in Pork Muscle Protein Phosphorylation in Relation to the RN Genotype

Preparation of Immobilized Enzyme Microcolumns: Figure 1

Preparation of Reversed-Phase Microcolumns: Figure 1

scientific article published on November 1, 2007

Protein expression changes in a cell system of beta-cell maturation reflect an acquired sensitivity to IL-1beta.

scientific article

Proteins differentially expressed in human beta-cells-enriched pancreatic islet cultures and human insulinomas

scientific article published on 24 July 2013

Proteome analysis of Saccharomyces cerevisiae: A methodological outline

scientific article published on August 1, 1997

Proteome profiling of Populus euphratica Oliv. upon heat stress

scientific article

Proteomic Expression Changes in Large Cerebral Arteries After Experimental Subarachnoid Hemorrhage in Rat Are Regulated by the MEK-ERK1/2 Pathway.

scientific article published on 24 July 2017

Proteomic Identification of Putative MicroRNA394 Target Genes in Arabidopsis thaliana Identifies Major Latex Protein Family Members Critical for Normal Development

scientific article

Proteomic profiling of mouse epididymosomes reveals their contributions to post-testicular sperm maturation

scientific article published on 13 September 2018

Proteomic signatures of neuroinflammation in Alzheimer's disease, multiple sclerosis and ischemic stroke

scientific article published on 08 July 2019

Proteomics of the oxidative stress response induced by hydrogen peroxide and paraquat reveals a novel AhpC-like protein in Pseudomonas aeruginosa

scientific journal article

Proteotranscriptomic Profiling of 231-BR Breast Cancer Cells: Identification of Potential Biomarkers and Therapeutic Targets for Brain Metastasis

scientific article

Purification and Identification ofO-GlcNAc-Modified Peptides Using Phosphate-Based Alkyne CLICK Chemistry in Combination with Titanium Dioxide Chromatography and Mass Spectrometry

scientific article published on 22 February 2011

Quantitative N-linked glycoproteomics of myocardial ischemia and reperfusion injury reveals early remodeling in the extracellular environment

scientific article

Quantitative Proteome Analysis Reveals Increased Content of Basement Membrane Proteins in Arteries From Patients With Type 2 Diabetes Mellitus and Lower Levels Among Metformin Users

article

Quantitative Proteomics and Phosphoproteomics Analysis Revealed Different Regulatory Mechanisms of Halothane and Rendement Napole Genes in Porcine Muscle Metabolism

article

Quantitative iTRAQ-Based Proteomic Identification of Candidate Biomarkers for Diabetic Nephropathy in Plasma of Type 1 Diabetic Patients

scientific article

Quantitative phosphoproteomic analysis of early alterations in protein phosphorylation by 2,3,7,8-tetrachlorodibenzo-p-dioxin

scientific article

Quantitative phosphoproteomic analysis of porcine muscle within 24 h postmortem

scientific article published on 24 April 2014

Quantitative proteomics analysis of platelet-derived microparticles reveals distinct protein signatures when stimulated by different physiological agonists

scientific article published on 30 March 2015

Quantitative proteomics by amino acid labeling in C. elegans

Quantitative proteomics of fractionated membrane and lumen exosome proteins from isogenic metastatic and nonmetastatic bladder cancer cells reveal differential expression of EMT factors

scientific article published on 16 February 2014

Quorum-sensing regulation of adhesion in Serratia marcescens MG1 is surface dependent

scientific article published on 19 January 2007

Research resource: New and diverse substrates for the insulin receptor isoform A revealed by quantitative proteomics after stimulation with IGF-II or insulin

scientific article published on 16 June 2011

Role of TGF-β1-independent changes in protein neosynthesis, p38αMAPK, and cdc42 in hydrogen peroxide-induced senescence-like morphogenesis

SILAC-based phosphoproteomics reveals new PP2A-Cdc55-regulated processes in budding yeast.

scientific article published on 24 April 2018

SIMAC (sequential elution from IMAC), a phosphoproteomics strategy for the rapid separation of monophosphorylated from multiply phosphorylated peptides

scientific article

Selective enrichment of sialic acid-containing glycopeptides using titanium dioxide chromatography with analysis by HILIC and mass spectrometry

scientific article published on 18 November 2010

Sequential Elution from IMAC (SIMAC): An Efficient Method for Enrichment and Separation of Mono- and Multi-phosphorylated Peptides

scientific article published in January 2016

Ser649 and Ser650 are the major determinants of protein kinase A-mediated activation of human hormone-sensitive lipase against lipid substrates

scientific article

Signal transduction in cerebral arteries after subarachnoid hemorrhage-a phosphoproteomic approach.

scientific article published on 29 May 2013

Simultaneous Enrichment of Cysteine-containing Peptides and Phosphopeptides Using a Cysteine-specific Phosphonate Adaptable Tag (CysPAT) in Combination with titanium dioxide (TiO2) Chromatography.

scientific article

Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campy

scientific article published on April 2010

Site-specific glycan-peptide analysis for determination of N-glycoproteome heterogeneity

scientific article published in November 2013

Snake Venom Extracellular vesicles (SVEVs) reveal wide molecular and functional proteome diversity

scientific article published in Scientific Reports

Spatial and temporal effects in protein post-translational modification distributions in the developing mouse brain

scientific article

Standardization and harmonization of distributed multi-center proteotype analysis supporting precision medicine studies

scientific article published on 16 October 2020

Stanniocalcin 1 and 2 are secreted as phosphoproteins from human fibrosarcoma cells

scientific article published in 2000

Structural basis for phosphorylation and lysine acetylation cross-talk in a kinase motif associated with myocardial ischemia and cardioprotection

scientific article

Structural basis for phosphorylation and lysine acetylation cross-talk in a kinase motif associated with myocardial ischemia and cardioprotection

scientific article published in Journal of Biological Chemistry

TNFα affects CREB-mediated neuroprotective signaling pathways of synaptic plasticity in neurons as revealed by proteomics and phospho-proteomics

scientific article published on 21 July 2017

Tauopathy in the APPswe/PS1ΔE9 mouse model of familial Alzheimer's disease

scholarly article published 31 August 2018

Technologies and challenges in large-scale phosphoproteomics

scientific article published on March 2013

The Arrhythmogenic Calmodulin Mutation D129G Dysregulates Cell Growth, Calmodulin-dependent Kinase II Activity, and Cardiac Function in Zebrafish

scientific article

The Splicing Efficiency of Activating HRAS Mutations Can Determine Costello Syndrome Phenotype and Frequency in Cancer

scientific article

The Use of Titanium Dioxide for Selective Enrichment of Phosphorylated Peptides

scientific article published in January 2016

The in vivo phosphorylation sites in multiple isoforms of amphiphysin I from rat brain nerve terminals

scientific article

The in vivo phosphorylation sites of rat brain dynamin I.

scientific article published on 20 March 2007

The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2.

scientific article

The phosphorylation pattern of bovine heart complex I subunits

scholarly article by Giuseppe Palmisano published in May 2007

The use of titanium dioxide micro-columns to selectively isolate phosphopeptides from proteolytic digests

scientific article published on January 2009

TiO(2)-based phosphoproteomic analysis of the plasma membrane and the effects of phosphatase inhibitor treatment

scientific article

TiSH--a robust and sensitive global phosphoproteomics strategy employing a combination of TiO2, SIMAC, and HILIC.

scientific article

Titanium dioxide as chemo-affinity chromatographic sorbent of biomolecular compounds--applications in acidic modification-specific proteomics

scientific article

Titanium dioxide enrichment of sialic acid-containing glycopeptides

scientific article published in January 2011

Two-dimensional gel analysis of human endometrial proteins: characterization of proteins with increased expression in hyperplasia and adenocarcinoma

article

Understanding Alzheimer's disease by global quantification of protein phosphorylation and sialylated N-linked glycosylation profiles: A chance for new biomarkers in neuroproteomics?

scientific article published on 7 April 2017

Undesirable Charge-Enhancement of Isobaric Tagged Phosphopeptides Leads to Reduced Identification Efficiency

scientific article published on 01 August 2010

Unraveling incompatibility between wheat and the fungal pathogen Zymoseptoria tritici through apoplastic proteomics

scientific article published on 8 May 2015

Unraveling the pathogenesis of type 1 diabetes with proteomics: present and future directions

scientific article

Unravelling the role of the ToxR-like transcriptional regulator WmpR in the marine antifouling bacterium Pseudoalteromonas tunicata

scientific article published in May 2006