Search filters

List of works by Gerald H Learn

A Naturally Occurring rev1-vpu Fusion Gene Does Not Confer a Fitness Advantage to HIV-1.

scientific article

Adaptive Evolution of RH5 in Ape Plasmodium species of the Laverania Subgenus

scientific article published on 23 January 2018

African origin of the malaria parasite Plasmodium vivax

scientific article

Amino-acid co-variation in HIV-1 Gag subtype C: HLA-mediated selection pressure and compensatory dynamics

scientific article

Ancient Introgression between Two Ape Malaria Parasite Species

scientific article published on 01 November 2019

Antibody 10-1074 suppresses viremia in HIV-1-infected individuals

scientific article

Breakthrough Virus Neutralization Resistance as a Correlate of Protection in a Nonhuman Primate Heterologous Simian Immunodeficiency Virus Vaccine Challenge Study

scientific article

Broadly Neutralizing Antibody Mediated Clearance of Human Hepatitis C Virus Infection

scholarly article published by Pamela J. Bjorkman in 2018

Broadly neutralizing antibodies with few somatic mutations and hepatitis C virus clearance

scientific article

CD4 receptor diversity in chimpanzees protects against SIV infection

scientific article published on 04 February 2019

CD8+ T-cell responses to different HIV proteins have discordant associations with viral load

scientific article published on 17 December 2006

Characteristics of a pathogenic molecular clone of an end-stage serum-derived variant of simian immunodeficiency virus (SIV(F359)).

scientific article

Clonal amplification and maternal-infant transmission of nevirapine-resistant HIV-1 variants in breast milk following single-dose nevirapine prophylaxis

scientific article published on 14 August 2013

Compartmentalization of HIV-1 within the female genital tract is due to monotypic and low-diversity variants not distinct viral populations

scientific article

Completeness of HIV-1 Envelope Glycan Shield at Transmission Determines Neutralization Breadth

article

Conflicting selective forces affect T cell receptor contacts in an immunodominant human immunodeficiency virus epitope

scientific article

Consensus and Ancestral State HIV Vaccines

scientific article published in Science

Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection

scientific article

Contribution of proteasome-catalyzed peptide cis-splicing to viral targeting by CD8+ T cells in HIV-1 infection

scientific article published on 20 November 2019

Correction: The Malagarasi River Does Not Form an Absolute Barrier to Chimpanzee Movement in Western Tanzania.

scientific article published on August 2017

Curiously Modern DNA for a ``250 Million-Year-Old'' Bacterium ⬇️

scientific article published on January 1, 2002

DIVEIN: a web server to analyze phylogenies, sequence divergence, diversity, and informative sites

scientific article

Derivation and Characterization of Pathogenic Transmitted/Founder Molecular Clones from Simian Immunodeficiency Virus SIVsmE660 and SIVmac251 following Mucosal Infection

scientific article published on 13 July 2016

Dual HIV-1 infection associated with rapid disease progression

scientific article (publication date: 21 February 2004)

Eastern chimpanzees, but not bonobos, represent a simian immunodeficiency virus reservoir

scientific article

Effect of HIV Antibody VRC01 on Viral Rebound after Treatment Interruption

scientific article

Effect of Immune Activation on the Dynamics of Human Immunodeficiency Virus Replication and on the Distribution of Viral Quasispecies ⬇️

scientific article published on October 1, 1998

Effective treatment of SIVcpz-induced immunodeficiency in a captive western chimpanzee

scientific article

Efficient SIVcpz replication in human lymphoid tissue requires viral matrix protein adaptation

scientific article

Efficient Vpu-Mediated Tetherin Antagonism by an HIV-1 Group O Strain

scientific article

Elucidation of hepatitis C virus transmission and early diversification by single genome sequencing

scientific article

Envelope residue 375 substitutions in simian-human immunodeficiency viruses enhance CD4 binding and replication in rhesus macaques

scientific article published on 31 May 2016

Evidence that low-level viremias during effective highly active antiretroviral therapy result from two processes: expression of archival virus and replication of virus

scientific article

Evolution of a simian immunodeficiency virus pathogen.

scientific article published in January 1998

Evolutionary history of human revealed by genome-wide analyses of related ape parasites

article published in the Proceedings of the National Academy of Sciences of the United States of America

Extensive intrasubtype recombination in South African human immunodeficiency virus type 1 subtype C infections

scientific article published on 21 February 2007

Founder Effects in the Assessment of HIV Polymorphisms and HLA Allele Associations

scientific article published in Science

Genetic analysis of viral variants selected in transmission of human immunodeficiency viruses to newborns

scientific article published on September 2000

Genetic diversity of feline immunodeficiency virus: dual infection, recombination, and distinct evolutionary rates among envelope sequence clades

scientific article published in June 1997

Genetic evaluation of suspected cases of transient HIV-1 infection of infants

scientific article published in May 1998

Genetic identity and biological phenotype of a transmitted/founder virus representative of nonpathogenic simian immunodeficiency virus infection in African green monkeys

scientific article

Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection

scientific article published on June 2009

Genetic subtypes of HIV-1 in the Philippines ⬇️

scientific article published on February 12, 1998

Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria.

scientific article

HIV Quasispecies and Resampling

scientific article published in Science

HIV-1 Neutralizing Antibody Signatures and Application to Epitope-Targeted Vaccine Design

article

HIV-1 Neutralizing Antibody Signatures and Application to Epitope-Targeted Vaccine Design

scientific article published on 01 August 2019

HIV-1 antibody 3BNC117 suppresses viral rebound in humans during treatment interruption

scientific article

HIV-1 integration landscape during latent and active infection

scientific article

HIV-1 latent reservoir size and diversity are stable following brief treatment interruption

article

HIV-1 nomenclature proposal

scientific article published in April 2000

HIV-1 therapy with monoclonal antibody 3BNC117 elicits host immune responses against HIV-1.

scientific article

HLA class I-driven evolution of human immunodeficiency virus type 1 subtype c proteome: immune escape and viral load

scientific article published on 23 April 2008

Heterogeneity in neutralization sensitivities of viruses comprising the simian immunodeficiency virus SIVsmE660 isolate and vaccine challenge stock

scientific article published on 6 March 2013

High Multiplicity Infection by HIV-1 in Men Who Have Sex with Men.

scientific article

High multiplicity infection following transplantation of hepatitis C virus-positive organs

scientific article published on 21 May 2019

High prevalence of simian immunodeficiency virus infection in a community of savanna chimpanzees

scientific article

Human Immunodeficiency Virus Type 1 Subtype B Ancestral Envelope Protein Is Functional and Elicits Neutralizing Antibodies in Rabbits Similar to Those Elicited by a Circulating Subtype B Envelope

scientific article (publication date: 15 August 2005)

Human immunodeficiency virus type 1 env evolves toward ancestral states upon transmission to a new host.

scientific article

Human immunodeficiency virus type 1 env sequences from Calcutta in eastern India: identification of features that distinguish subtype C sequences in India from other subtype C sequences

scientific article

Human tetherin exerts strong selection pressure on the HIV-1 group N Vpu protein

scientific article

Identification, molecular cloning, and analysis of full-length hepatitis C virus transmitted/founder genotypes 1, 3, and 4

scientific article

Immunogen sequence: the fourth tier of AIDS vaccine design

scientific article

Impact of simian immunodeficiency virus infection on chimpanzee population dynamics

scientific article

Increased mortality and AIDS-like immunopathology in wild chimpanzees infected with SIVcpz

scientific article

Increased mutations in Env and Pol suggest greater HIV-1 replication in sputum-derived viruses compared with blood-derived viruses

scientific article published on May 2009

Investigating zoonotic infection barriers to ape Plasmodium parasites using faecal DNA analysis

scientific article

Large-scale amplification, cloning and sequencing of near full-length HIV-1 subtype C genomes

scientific article published on 15 May 2006

Local replication of simian immunodeficiency virus in the breast milk compartment of chronically-infected, lactating rhesus monkeys

scientific article

Longitudinal Antigenic Sequences and Sites from Intra-Host Evolution (LASSIE) Identifies Immune-Selected HIV Variants

scientific article

Low Multiplicity of HIV-1 Infection and No Vaccine Enhancement in VAX003 Injection Drug Users

scientific article

Low-dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1.

scientific article published on 04 May 2009

Methods used to examine compartmentalization of viral populations between the genital tract and peripheral blood

scientific article published in August 2007

Molecular clock-like evolution of human immunodeficiency virus type 1.

scientific article

Molecular identification, cloning and characterization of transmitted/founder HIV-1 subtype A, D and A/D infectious molecular clones

scientific article published on November 2012

Molecular mechanisms of HIV type 1 prophylaxis failure revealed by single-genome sequencing

scientific article published on 09 September 2013

Monotypic human immunodeficiency virus type 1 genotypes across the uterine cervix and in blood suggest proliferation of cells with provirus

scientific article published on April 2009

Mother-to-infant transmission of human immunodeficiency virus type 1 involving five envelope sequence subtypes

scientific article published in February 1997

Multigenomic Delineation of Plasmodium Species of the Laverania Subgenus Infecting Wild-Living Chimpanzees and Gorillas

scientific article

Multiple viral genetic analyses detect low-level human immunodeficiency virus type 1 replication during effective highly active antiretroviral therapy

scientific article

Nef proteins of epidemic HIV-1 group O strains antagonize human tetherin

scientific article

Neutralization properties of simian immunodeficiency viruses infecting chimpanzees and gorillas

scientific article published on 21 April 2015

OA06-04. The role of early T-cell responses in subjects with acute HIV-1 infection

scientific article published on 22 October 2009

Origin and biology of simian immunodeficiency virus in wild-living western gorillas

scientific article published on 10 December 2008

Origin and evolution of HIV-1 in breast milk determined by single-genome amplification and sequencing

scientific article published on 29 December 2010

Origin of the HIV-1 group O epidemic in western lowland gorillas

scientific article

Origin of the human malaria parasite Plasmodium falciparum in gorillas

scientific article

Origin of the human malaria parasite Plasmodium falciparum in gorillas.

scientific article

Out of Africa: origins and evolution of the human malaria parasites Plasmodium falciparum and Plasmodium vivax

scientific article published on 2 July 2016

POPULATION SUBDIVISION FOR RIBOSOMAL DNA REPEAT VARIANTS IN CLEMATIS FREMONTII.

scientific article

Paired quantitative and qualitative assessment of the replication-competent HIV-1 reservoir and comparison with integrated proviral DNA.

scientific article published on 21 November 2016

Persistence of Extraordinarily Low Levels of Genetically Homogeneous Human Immunodeficiency Virus Type 1 in Exposed Seronegative Individuals ⬇️

scientific article published on June 1, 2003

Persistence of low levels of simian immunodeficiency virus in macaques that were transiently viremic by conventional testing

scientific article published in June 2004

Phylogenetic Hypotheses for the Monocotyledons Constructed from rbcL Sequence Data

article

Phylogenetics of Seed Plants: An Analysis of Nucleotide Sequences from the Plastid Gene rbcL

article

Plasmodium falciparum-like parasites infecting wild apes in southern Cameroon do not represent a recurrent source of human malaria

scientific article

Postnatally-transmitted HIV-1 Envelope variants have similar neutralization-sensitivity and function to that of nontransmitted breast milk variants

scientific article published on 10 January 2013

Postnatally-transmitted HIV-1 variants are efficient at dendritic cell trans-infection and sensitive to autologous and heterologous neutralization.

scientific article published on 13 September 2012

Predicting demographic group structures based on DNA sequence data

scientific article

Preferential detection of HIV subtype C' over subtype A in cervical cells from a dually infected woman

scientific article published on 01 June 2005

Presence of multiple HIV subtypes and a high frequency of subtype chimeric viruses in heterosexually infected women

scientific article published in December 1999

Protecting HIV databases

scientific article published in Nature

Quantifying the diversification of hepatitis C virus (HCV) during primary infection: estimates of the in vivo mutation rate

scientific article

Rare HLA drive additional HIV evolution compared to more frequent alleles

scientific article published on March 2009

Reacquisition of Nef-mediated tetherin antagonism in a single in vivo passage of HIV-1 through its original chimpanzee host

scientific article

Recognition of HIV-1 peptides by host CTL is related to HIV-1 similarity to human proteins

scientific article

Reconstruction and Function of Ancestral Center-of-Tree Human Immunodeficiency Virus Type 1 Proteins

scientific article (publication date: 30 May 2007)

Reply to Forni et al., "Multiple Selected Changes May Modulate the Molecular Interaction between Laverania RH5 and Primate Basigin".

scientific article published on 22 May 2018

Resistance to type 1 interferons is a major determinant of HIV-1 transmission fitness

scientific article published on 09 January 2017

Single-Genome Sequencing of Hepatitis C Virus in Donor-Recipient Pairs Distinguishes Modes and Models of Virus Transmission and Early Diversification

scientific article

Source of the human malaria parasite Plasmodium falciparum

scientific article published on 8 September 2011

Species-specific host factors rather than virus-intrinsic virulence determine primate lentiviral pathogenicity

scientific article published on 10 April 2018

Substitution Model of Sequence Evolution for the Human Immunodeficiency Virus Type 1 Subtype B gp120 Gene over the C2-V5 Region ⬇️

scientific article published on July 1, 2001

Testing the hypothesis of a recombinant origin of human immunodeficiency virus type 1 subtype E.

scientific article

Tetherin-driven adaptation of Vpu and Nef function and the evolution of pandemic and nonpandemic HIV-1 strains.

scientific article

The Potency of Nef-Mediated SERINC5 Antagonism Correlates with the Prevalence of Primate Lentiviruses in the Wild

scientific article published on September 2016

The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection

scientific article published on June 2009

The malagarasi river does not form an absolute barrier to chimpanzee movement in Western Tanzania

scientific article

Ubiquitous Hepatocystis infections, but no evidence of Plasmodium falciparum-like malaria parasites in wild greater spot-nosed monkeys (Cercopithecus nictitans).

scientific article published on 09 June 2012

Use of Dried Blood Spots to Elucidate Full-Length Transmitted/Founder HIV-1 Genomes

scientific article published on January 2016

ViroBLAST: a stand-alone BLAST web server for flexible queries of multiple databases and user's datasets

scientific article

Virus population homogenization following acute human immunodeficiency virus type 1 infection

scientific article

Wide variation in the multiplicity of HIV-1 infection among injection drug users

scientific article

Wild bonobos host geographically restricted malaria parasites including a putative new Laverania species

scientific article published on 21 November 2017

Paulina is supported by:

About Paulina

Help