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List of works by Olga S. Fedorova

A kinetic mechanism of repair of DNA containing α-anomeric deoxyadenosine by human apurinic/apyrimidinic endonuclease 1.

scientific article

A series of meso-tris(N-methyl-pyridiniumyl)-(4-alkylamidophenyl) porphyrins: Synthesis, interaction with DNA and antibacterial activity ⬇️

scientific article published on November 20, 1997

Active destabilization of base pairs by a DNA glycosylase wedge initiates damage recognition

scientific article

Application of tris(2,2'-bipyridyl)ruthenium(III) for the investigation of DNA spatial structure by a chemical modification method

scientific article published on 01 November 1988

Apurinic/apyrimidinic endonuclease Apn1 from Saccharomyces cerevisiae is recruited to the nucleotide incision repair pathway: Kinetic and structural features

scientific article published on 26 June 2018

Binding of a desmetallo-porphyrin conjugate of Hoechst 33258 to DNA. III. Strong bonding to single-strand oligonucleotides.

scientific article published in January 2001

Binding of a porphyrin conjugate of Hoechst 33258 to DNA. I. UV-visible and melting studies detect multiple binding modes to a 12-mer nonself-complementary duplex.

scientific article published in January 2001

Complementary addressed modification of double-stranded DNA within a ternary complex

scientific article published on 01 February 1988

Conformational Dynamics of DNA Repair by Escherichia coli Endonuclease III

scientific article published on 13 April 2015

Conformational dynamics of abasic DNA upon interactions with AP endonuclease 1 revealed by stopped-flow fluorescence analysis.

scientific article

Conformational dynamics of the interaction of Escherichia coli endonuclease VIII with DNA substrates.

scientific article published on 19 September 2012

Conformational transitions in human AP endonuclease 1 and its active site mutant during abasic site repair.

scientific article published on August 2010

Conjugates of phthalocyanines with oligonucleotides as reagents for sensitized or catalytic DNA modification

scientific article

Cooperative Interactions of the Oligodeoxyribonucleotides on the Complementary Template. The Influence of Chemical Groups and Mismatched Nucleotides at the 5′- and 3′-ends of Oligonucleotides on the Parameters of Cooperativity ⬇️

scientific article published on October 1, 1997

Cooperative interactions in the tandem of oligonucleotide derivatives arranged at complementary target. Quantitative estimates and contribution of the target secondary structure.

scientific article published in August 1995

DNA damage processing by human 8-oxoguanine-DNA glycosylase mutants with the occluded active site.

scientific article published on 17 August 2013

Effect of Some Substituents Increasing the Solubility of Zn(II) and Al(III) Phthalocyanines on Their Photophysical Properties

scientific article published on 11 September 2014

Effect of complexation with arabinogalactan on pharmacokinetics of "guest" drugs in rats: for example, warfarin.

scientific article published on 26 December 2013

Effects of mono- and divalent metal ions on DNA binding and catalysis of human apurinic/apyrimidinic endonuclease 1.

scientific article

Evolution of inhibitor-resistant natural mutant forms of HIV-1 protease probed by pre-steady state kinetic analysis.

scientific article published on 23 August 2017

Genetic and biochemical characterization of human AP endonuclease 1 mutants deficient in nucleotide incision repair activity

scientific article

Global DNA dynamics of 8-oxoguanine repair by human OGG1 revealed by stopped-flow kinetics and molecular dynamics simulation.

scientific article published on 3 August 2017

Highly mutagenic exocyclic DNA adducts are substrates for the human nucleotide incision repair pathway

scientific article

Hydroxyl radical generation and DNA strand scission mediated by natural anticancer and synthetic quinones

scientific article published on 01 January 1989

Insight into the mechanism of DNA synthesis by human terminal deoxynucleotidyltransferase

scientific article published in 2022

Interaction of human and Escherichia coli tRNA(Phe) with human 80S ribosomes in the presence of oligo- and polyuridylate templates

scientific article published on 01 November 1992

Interaction of puromycin with acceptor site of human placenta 80 S ribosomes

scientific article published on 01 December 1990

Kinetic Basis of the Bifunctionality of SsoII DNA Methyltransferase

scientific article published on 16 May 2018

Kinetic Features of 3'-5' Exonuclease Activity of Human AP-Endonuclease APE1

scientific article published on 21 August 2018

Kinetic conformational analysis of human 8-oxoguanine-DNA glycosylase

scientific article published on 07 November 2006

Kinetic mechanism of human apurinic/apyrimidinic endonuclease action in nucleotide incision repair

scientific article published on 01 February 2011

Kinetic study of DNA modification by phthalocyanine derivative of the oligonucleotide.

scientific article

Kinetic study of the addressed modification by hemin derivatives of oligonucleotides

article

Kinetics and Thermodynamics of DNA Processing by Wild Type DNA-Glycosylase Endo III and Its Catalytically Inactive Mutant Forms

scientific article published on 30 March 2018

Lys98 Substitution in Human AP Endonuclease 1 Affects the Kinetic Mechanism of Enzyme Action in Base Excision and Nucleotide Incision Repair Pathways ⬇️

scientific article published on January 1, 2011

Mechanism of Antisense Oligonucleotide Interaction with Natural RNAs ⬇️

scientific article published on August 1, 2011

Mechanism of recognition and repair of damaged DNA by human 8-oxoguanine DNA glycosylase hOGG1.

scientific article published on January 2011

Modulation of the Apurinic/Apyrimidinic Endonuclease Activity of Human APE1 and of Its Natural Polymorphic Variants by Base Excision Repair Proteins

scientific article published on 28 September 2020

New environment-sensitive multichannel DNA fluorescent label for investigation of the protein-DNA interactions

scientific article

New oligonucleotide derivatives as unreactive substrate analogues and potential inhibitors of human apurinic/apyrimidinic endonuclease APE1.

scientific article

Oxidative degradation of nucleic acids

article published in 1993

PELDOR analysis of enzyme-induced structural changes in damaged DNA duplexes ⬇️

scientific article published on July 6, 2011

PELDOR study of conformations of double-spin-labeled single- and double-stranded DNA with non-nucleotide inserts.

scientific article published on 27 May 2009

Palladium(II)-coproporphyrin I as a photoactivable group in sequence-specific modification of nucleic acids by oligonucleotide derivatives

scientific article published on 01 January 1990

Photosensitized and catalytic oxidation of DNA by metallophthalocyanine-oligonucleotide conjugates.

scientific article published in April 2001

Pre-steady state kinetics of DNA binding and abasic site hydrolysis by tyrosyl-DNA phosphodiesterase 1.

scientific article

Pre-steady-state fluorescence analysis of damaged DNA transfer from human DNA glycosylases to AP endonuclease APE1.

scientific article published on 31 July 2014

Pre-steady-state kinetic analysis of damage recognition by human single-strand selective monofunctional uracil-DNA glycosylase SMUG1.

scientific article

Pre-steady-state kinetic and structural analysis of interaction of methionine γ-lyase from Citrobacter freundii with inhibitors

scientific article published on 14 November 2014

Pre-steady-state kinetics of interaction of wild-type and multiple drug-resistant HIV protease with first and second generation inhibitory drugs

scientific article published on 01 September 2011

Quantitative surface-enhanced resonance Raman scattering of phthalocyanine-labelled oligonucleotides.

scientific article published on 8 February 2007

Real-time oligonucleotide hybridization kinetics monitored by resonant mirror technique.

scientific article published in September 1999

Reversible chemical step and rate-limiting enzyme regeneration in the reaction catalyzed by formamidopyrimidine-DNA glycosylase.

scientific article published in December 2009

Role of Ionizing Amino Acid Residues in the Process of DNA Binding by Human AP Endonuclease 1 and in Its Catalysis

scientific article published on 01 November 2019

Role of κ→λ light-chain constant-domain switch in the structure and functionality of A17 reactibody

scientific article

Roles of Active-Site Amino Acid Residues in Specific Recognition of DNA Lesions by Human 8-Oxoguanine-DNA Glycosylase (OGG1)

scientific article published on 31 May 2019

Selective inhibition of the polypeptide chain elongation in eukaryotic cells.

scientific article published in January 1992

Step-by-step mechanism of DNA damage recognition by human 8-oxoguanine DNA glycosylase.

scientific article

Substrate recognition of anthrax lethal factor examined by combinatorial and pre-steady-state kinetic approaches

scientific article

The Role of Active-Site Plasticity in Damaged-Nucleotide Recognition by Human Apurinic/Apyrimidinic Endonuclease APE1

scientific article published on 28 August 2020

The Role of Active-Site Residues Phe98, His239, and Arg243 in DNA Binding and in the Catalysis of Human Uracil-DNA Glycosylase SMUG1

scientific article published on 28 August 2019

The formation of catalytically competent enzyme-substrate complex is not a bottleneck in lesion excision by human alkyladenine DNA glycosylase.

scientific article

The impact of single-nucleotide polymorphisms of human apurinic/apyrimidinic endonuclease 1 on specific DNA binding and catalysis

scientific article published on 28 May 2019

The influence of the target structure on the efficiency of alkylation of single-stranded DNA with the reactive derivatives of antisense oligonucleotides

scientific article published on 01 May 1992

The role of Asn-212 in the catalytic mechanism of human endonuclease APE1: stopped-flow kinetic study of incision activity on a natural AP site and a tetrahydrofuran analogue

scientific article published on 01 September 2014

The role of His-83 of yeast apurinic/apyrimidinic endonuclease Apn1 in catalytic incision of abasic sites in DNA.

scientific article published on 10 March 2015

The role of the N-terminal domain of human apurinic/apyrimidinic endonuclease 1, APE1, in DNA glycosylase stimulation

scientific article published on 11 February 2018

Thermodynamic, kinetic, and structural basis for recognition and repair of 8-oxoguanine in DNA by Fpg protein from Escherichia coli.

scientific article

Thermodynamics of interaction of phthalocyanine-oligonucleotide conjugates with single- and double-stranded DNA.

scientific article published in October 2004

Thermodynamics of the DNA damage repair steps of human 8-oxoguanine DNA glycosylase.

scientific article

Thermodynamics of the multi-stage DNA lesion recognition and repair by formamidopyrimidine-DNA glycosylase using pyrrolocytosine fluorescence—stopped-flow pre-steady-state kinetics ⬇️

scientific article published on May 14, 2012

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