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List of works by Jun G Inoue

A key metabolic gene for recurrent freshwater colonization and radiation in fishes

scientific article published on 01 May 2019

Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the "ancient fish".

scientific article published in January 2003

Best practices for justifying fossil calibrations

scientific article (publication date: March 2012)

Body plan convergence in the evolution of skates and rays (Chondrichthyes: Batoidea).

scientific article published on 22 December 2011

Deep-ocean origin of the freshwater eels

scientific article

Deuterostome Genomics: Lineage-specific Protein Expansions that Enabled Chordate Muscle Evolution

scientific article published on 8 January 2018

Divergence time of the two regional medaka populations in Japan as a new time scale for comparative genomics of vertebrates

scientific article (publication date: 23 December 2009)

Evolution of the deep-sea gulper eel mitochondrial genomes: large-scale gene rearrangements originated within the eels.

scientific article

Evolutionary origin and phylogeny of the modern holocephalans (Chondrichthyes: Chimaeriformes): a mitogenomic perspective

scientific article

Evolutionary origin of the Scombridae (tunas and mackerels): members of a paleogene adaptive radiation with 14 other pelagic fish families

scientific article (publication date: 2013)

Interrelationships of Atherinomorpha (medakas, flyingfishes, killifishes, silversides, and their relatives): The first evidence based on whole mitogenome sequences

scientific article published on 19 August 2008

Interrelationships of the 11 gasterosteiform families (sticklebacks, pipefishes, and their relatives): a new perspective based on whole mitogenome sequences from 75 higher teleosts.

scientific article

Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences.

scientific article published on January 2003

Mitochondrial genomics of ostariophysan fishes: perspectives on phylogeny and biogeography

scientific article (publication date: April 2003)

Molecular phylogeny and evolution of the freshwater eels genus Anguilla based on the whole mitochondrial genome sequences

scientific article published on 01 January 2005

Molecular systematics of the gonorynchiform fishes (Teleostei) based on whole mitogenome sequences: implications for higher-level relationships within the Otocephala.

scientific article

ORTHOSCOPE Analysis Reveals the Presence of the Cellulose Synthase Gene in All Tunicate Genomes but Not in Other Animal Genomes.

scientific article published on 10 April 2019

ORTHOSCOPE: An Automatic Web Tool for Phylogenetically Inferring Bilaterian Orthogroups with User-Selected Taxa

scientific article published on 01 March 2019

Phylogenetic Analyses of Glycosyl Hydrolase Family 6 Genes in Tunicates: Possible Horizontal Transfer

scientific article published on 13 August 2020

Phylogenomic datasets provide both precision and accuracy in estimating the timescale of placental mammal phylogeny

scientific article (publication date: 7 September 2012)

Rapid genome reshaping by multiple-gene loss after whole-genome duplication in teleost fish suggested by mathematical modeling

scientific article

Repertoires of G protein-coupled receptors for -specific neuropeptides

scientific article published on 01 April 2019

The chordate ancestor possessed a single copy of the Brachyury gene for notochord acquisition

scientific article published on 23 March 2017

The historical biogeography of the freshwater knifefishes using mitogenomic approaches: a mesozoic origin of the Asian notopterids (Actinopterygii: Osteoglossomorpha).

scientific article

The mitochondrial genome of Indonesian coelacanth Latimeria menadoensis (Sarcopterygii: Coelacanthiformes) and divergence time estimation between the two coelacanths

scientific article

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