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List of works by Julie C Dunning Hotopp

Accumulation of endosymbiont genomes in an insect autosome followed by endosymbiont replacement

scientific article published in 2022

Aligner optimization increases accuracy and decreases compute times in multi-species sequence data

scientific article

Best Practices for Successfully Writing and Publishing a Genome Announcement in Microbiology Resource Announcements ⬇️

scientific article published on 03 September 2020

Best practices on the differential expression analysis of multi-species RNA-seq

publication published on 29 April 2021

Comparative genomics of emerging human ehrlichiosis agents

scientific article

Comparative genomics of the Erwinia and Enterobacter olive fly endosymbionts

scientific article published in Scientific Reports

Complete Genome Sequence of wAna, the Wolbachia Endosymbiont of Drosophila ananassae

scientific article published on 24 October 2019

Complete Genome Sequence of wBp, the Wolbachia Endosymbiont of Brugia pahangi FR3

scientific article published on 02 July 2020

Complete Mitochondrial Genome Sequence of Mansonella perstans

scientific article published on 23 July 2020

Correction: Comparative Genomics of Emerging Human Ehrlichiosis Agents.

scientific article

Drug Repurposing of Bromodomain Inhibitors as Potential Novel Therapeutic Leads for Lymphatic Filariasis Guided by Multispecies Transcriptomics

scientific article published on 03 December 2019

Efficient subtraction of insect rRNA prior to transcriptome analysis of Wolbachia-Drosophila lateral gene transfer ⬇️

scientific article published on May 14, 2012

Grafting or pruning in the animal tree: lateral gene transfer and gene loss?

scientific article published on 18 June 2018

Horizontal gene transfer between bacteria and animals ⬇️

scientific article published on February 18, 2011

Improving pan-genome annotation using whole genome multiple alignment

scientific article

Intrinsic tryptophan fluorescence as a probe of metal and alpha-ketoglutarate binding to TfdA, a mononuclear non-heme iron dioxygenase

scientific article published in January 2003

Isolation of a divergent strain of Rickettsia japonica from Dew's Australian bat Argasid ticks (Argas (Carios) dewae) in Victoria, Australia

scientific article published in September 2018

Molecular epidemiology of Neisseria meningitidis serogroup B in Brazil

scientific article (publication date: 2012)

Nearly Complete Genome Sequence of Brugia malayi Strain FR3

scientific article published on 11 June 2020

Nearly Complete Genome Sequence of Brugia pahangi FR3

scientific article published on 02 July 2020

Sex chromosome evolution in parasitic nematodes of humans

scientific article published on 23 April 2020

Standardized metadata for human pathogen/vector genomic sequences

scientific article (publication date: 2014)

Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species

scientific article

Targeted Enrichment and Sequencing of Recent Endosymbiont-Host Lateral Gene Transfers

scientific article

Targeted enrichment outperforms other enrichment techniques and enables more multi-species RNA-Seq analyses

scientific article published in Scientific Reports

The Complexities and Nuances of Analyzing the Genome of Drosophila ananassae and Its Wolbachia Endosymbiont.

scientific article

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