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List of works by Martin Schaefer

A Comprehensive View of the β-Arrestinome.

scientific article

A network of epigenetic modifiers and DNA repair genes controls tissue-specific copy number alteration preference.

scientific article published on 10 November 2016

Adding protein context to the human protein-protein interaction network to reveal meaningful interactions.

scientific article

Aggregation of polyQ-extended proteins is promoted by interaction with their natural coiled-coil partners

scientific article published on 11 March 2013

Cell type-specific properties and environment shape tissue specificity of cancer genes

scientific article published on 9 February 2016

Characterizing protein interactions employing a genome-wide siRNA cellular phenotyping screen

scientific article

Correcting for the study bias associated with protein-protein interaction measurements reveals differences between protein degree distributions from different cancer types

scientific article published on 4 August 2015

CrossLink: visualization and exploration of sequence relationships between (micro) RNAs

scientific article published on July 2006

Development and application of a DNA microarray-based yeast two-hybrid system

scientific article

Evolution and function of CAG/polyglutamine repeats in protein-protein interaction networks.

scientific article

Functional and genomic analyses of alpha-solenoid proteins

scientific article

HIPPIE v2.0: enhancing meaningfulness and reliability of protein-protein interaction networks

scientific article published on 24 October 2016

HIPPIE: Integrating protein interaction networks with experiment based quality scores.

scientific article

Identification of human proteins that modify misfolding and proteotoxicity of pathogenic ataxin-1

scientific article

MedlineRanker: flexible ranking of biomedical literature

scientific article

Molecular insights into reprogramming-initiation events mediated by the OSKM gene regulatory network

scientific article

Mutation bias within oncogene families is related to proliferation-specific codon usage

scientific article published on 16 November 2020

Negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome.

scientific article published on 31 May 2018

Protein conservation and variation suggest mechanisms of cell type-specific modulation of signaling pathways

scientific article

Silencing of SRRM4 suppresses microexon inclusion and promotes tumor growth across cancers

scientific article published on 23 February 2021

Spatiotemporal Proteomic Profiling of Huntington's Disease Inclusions Reveals Widespread Loss of Protein Function.

scientific article published in November 2017

SynSysNet: integration of experimental data on synaptic protein-protein interactions with drug-target relations

scientific article

The cis-regulatory code of Hox function in Drosophila.

scientific article published on 10 July 2012

The cis-regulatory code of Hox function in Drosophila.

scientific article published in November 2015

Tissue-specific DNA methylation loss during ageing and carcinogenesis is linked to chromosome structure, replication timing and cell division rates

scientific article published on 01 August 2018

Tissue-specific subnetworks and characteristics of publicly available human protein interaction databases.

scientific article published on 28 July 2011

Translational adaptation of human viruses to the tissues they infect

scientific article published on 07 April 2020

Translational efficiency across healthy and tumor tissues is proliferation-related

scientific article published on 01 March 2020

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