List of works - Mircea Podar

Structure, function and diversity of the healthy human microbiome

scientific article

A framework for human microbiome research

scientific article

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

scientific article

Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing

scientific article published on December 15, 2011

The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism

scientific article

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

scientific article

Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types

scientific article

Biogeography of the ecosystems of the healthy human body

scientific article

A korarchaeal genome reveals insights into the evolution of the Archaea

scientific article

The genetic basis for bacterial mercury methylation

scientific article

Targeted access to the genomes of low-abundance organisms in complex microbial communities.

scientific article published on 16 March 2007

Host genetic and environmental effects on mouse intestinal microbiota.

scientific article

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

scientific article published on 14 January 2016

A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees

scientific article

Mercury methylation by novel microorganisms from new environments

scientific article

Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge.

scientific article

Comparative metagenomic and rRNA microbial diversity characterization using archaeal and bacterial synthetic communities

scientific article

Environmental whole-genome amplification to access microbial populations in contaminated sediments

scientific article published in May 2006

A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans

scientific article

Exploring nitrilase sequence space for enantioselective catalysis

scientific article published in April 2004

Group II intron splicing in vivo by first-step hydrolysis

scientific article published on February 26, 1998

The stereochemical course of group II intron self-splicing.

scientific article

A molecular phylogenetic framework for the phylum Ctenophora using 18S rRNA genes.

scientific article

The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves.

scientific article

Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park

scientific article

Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams

scientific article

Inter-field variability in the microbial communities of hydrothermal vent deposits from a back-arc basin.

scientific article

Stereochemical selectivity of group II intron splicing, reverse splicing, and hydrolysis reactions

scientific article published on August 1995

Global prevalence and distribution of genes and microorganisms involved in mercury methylation

scientific article

Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park

scientific article

Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment

scientific article published on 05 July 2016

More than one way to splice an RNA: branching without a bulge and splicing without branching in group II introns.

scientific article published in October 1998

Complete and draft genome sequences of six members of the Aquificales

scientific article

New opportunities revealed by biotechnological explorations of extremophiles.

scientific article

Proteomic characterization of cellular and molecular processes that enable the Nanoarchaeum equitans--Ignicoccus hospitalis relationship.

scientific article

Regulatory elements involved in tax-mediated transactivation of the HTLV-I LTR.

scientific article published on October 1993

Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T.

scientific article

Cellulases: ambiguous nonhomologous enzymes in a genomic perspective

scientific article published on June 16, 2011

Characterization of archaeal community in contaminated and uncontaminated surface stream sediments

scientific article

The two steps of group II intron self-splicing are mechanistically distinguishable.

scientific article

Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132

scientific article

Multiple single-cell genomes provide insight into functions of uncultured Deltaproteobacteria in the human oral cavity

scientific article

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

scientific article

The prokaryotic V4R domain is the likely ancestor of a key component of the eukaryotic vesicle transport system

scientific article

A UV-induced, Mg(2+)-dependent crosslink traps an active form of domain 3 of a self-splicing group II intron.

scientific article published in October 1995

Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes

scientific article

Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans

scientific article

Targeted isolation and cultivation of uncultivated bacteria by reverse genomics

scientific article published on 30 September 2019

Toward unrestricted use of public genomic data:

scientific article

Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp

scientific article published on 20 January 2012

List of works by Mircea Podar

Structure, function and diversity of the healthy human microbiome

A framework for human microbiome research

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

Distinct and complex bacterial profiles in human periodontitis and health revealed by 16S pyrosequencing

The genome of Nanoarchaeum equitans: insights into early archaeal evolution and derived parasitism

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

Distinct microbial communities within the endosphere and rhizosphere of Populus deltoides roots across contrasting soil types

Biogeography of the ecosystems of the healthy human body

A korarchaeal genome reveals insights into the evolution of the Archaea

The genetic basis for bacterial mercury methylation

Targeted access to the genomes of low-abundance organisms in complex microbial communities.

Host genetic and environmental effects on mouse intestinal microbiota.

A comprehensive benchmarking study of protocols and sequencing platforms for 16S rRNA community profiling

A multifactor analysis of fungal and bacterial community structure in the root microbiome of mature Populus deltoides trees

Mercury methylation by novel microorganisms from new environments

Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge.

Comparative metagenomic and rRNA microbial diversity characterization using archaeal and bacterial synthetic communities

Environmental whole-genome amplification to access microbial populations in contaminated sediments

A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans

Exploring nitrilase sequence space for enantioselective catalysis

Group II intron splicing in vivo by first-step hydrolysis

The stereochemical course of group II intron self-splicing.

A molecular phylogenetic framework for the phylum Ctenophora using 18S rRNA genes.

The heteromeric Nanoarchaeum equitans splicing endonuclease cleaves noncanonical bulge-helix-bulge motifs of joined tRNA halves.

Insights into archaeal evolution and symbiosis from the genomes of a nanoarchaeon and its inferred crenarchaeal host from Obsidian Pool, Yellowstone National Park

Mercury and other heavy metals influence bacterial community structure in contaminated Tennessee streams

Inter-field variability in the microbial communities of hydrothermal vent deposits from a back-arc basin.

Stereochemical selectivity of group II intron splicing, reverse splicing, and hydrolysis reactions

Global prevalence and distribution of genes and microorganisms involved in mercury methylation

Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park

Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment

More than one way to splice an RNA: branching without a bulge and splicing without branching in group II introns.

Complete and draft genome sequences of six members of the Aquificales

New opportunities revealed by biotechnological explorations of extremophiles.

Proteomic characterization of cellular and molecular processes that enable the Nanoarchaeum equitans--Ignicoccus hospitalis relationship.

Regulatory elements involved in tax-mediated transactivation of the HTLV-I LTR.

Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T.

Cellulases: ambiguous nonhomologous enzymes in a genomic perspective

Characterization of archaeal community in contaminated and uncontaminated surface stream sediments

The two steps of group II intron self-splicing are mechanistically distinguishable.

Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132

Multiple single-cell genomes provide insight into functions of uncultured Deltaproteobacteria in the human oral cavity

Establishment and metabolic analysis of a model microbial community for understanding trophic and electron accepting interactions of subsurface anaerobic environments

The prokaryotic V4R domain is the likely ancestor of a key component of the eukaryotic vesicle transport system

A UV-induced, Mg(2+)-dependent crosslink traps an active form of domain 3 of a self-splicing group II intron.

Contrasting taxonomic stratification of microbial communities in two hypersaline meromictic lakes

Life on the edge: functional genomic response of Ignicoccus hospitalis to the presence of Nanoarchaeum equitans

Targeted isolation and cultivation of uncultivated bacteria by reverse genomics

Toward unrestricted use of public genomic data:

Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp