List of works - Petra C Schwalie

A CTCF-independent role for cohesin in tissue-specific transcription

scientific article

A stromal cell population that inhibits adipogenesis in mammalian fat depots

scientific article published in Nature

ASAP: a Web-based platform for the analysis and interactive visualization of single-cell RNA-seq data

scientific article

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research ⬇️

preprint

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research

article published in Nucleic Acid Research

CAST-ChIP maps cell-type-specific chromatin states in the Drosophila central nervous system.

scientific article published on 3 October 2013

Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes

scientific article

Cohesin regulates tissue-specific expression by stabilizing highly occupied cis-regulatory modules

scientific journal article

Cross-Tissue Identification of Somatic Stem and Progenitor Cells Using a Single-Cell RNA-Sequencing Derived Gene Signature

scientific article published on 16 October 2017

Dissecting the brown adipogenic regulatory network using integrative genomics

scientific article published on 09 February 2017

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

scientific article

GLUT3 is induced during epithelial-mesenchymal transition and promotes tumor cell proliferation in non-small cell lung cancer

scientific article

Identification of the transcription factor ZEB1 as a central component of the adipogenic gene regulatory network

scientific article

Insights into hominid evolution from the gorilla genome sequence

scientific article

Insights into negative regulation by the glucocorticoid receptor from genome-wide profiling of inflammatory cistromes

scientific article published on 15 November 2012

Latent regulatory potential of human-specific repetitive elements

scientific article published on 13 December 2012

MECHANISM AND EFFECTS OF PULSATILE GABA SECRETION FROM CYTOSOLIC POOLS IN THE HUMAN BETA CELL

scientific article published on 15 November 2019

Positive Selection in Tick Saliva Proteins of the Salp15 Family

scientific article published on 22 January 2009

Reversible De-differentiation of Mature White Adipocytes into Preadipocyte-like Precursors during Lactation

scientific article published on 14 June 2018

Systems-Genetics-Based Inference of a Core Regulatory Network Underlying White Fat Browning

scientific article published on 01 December 2019

Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders

scientific article published on 31 August 2016

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages.

scientific article published in February 2012

Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages

scientific article (publication date: 20 January 2012)

ZFP30 promotes adipogenesis through the KAP1-mediated activation of a retrotransposon-derived Pparg2 enhancer

scientific article published on 18 April 2019

List of works by Petra C Schwalie

A CTCF-independent role for cohesin in tissue-specific transcription

A stromal cell population that inhibits adipogenesis in mammalian fat depots

ASAP: a Web-based platform for the analysis and interactive visualization of single-cell RNA-seq data

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research ⬇️

Besca, a single-cell transcriptomics analysis toolkit to accelerate translational research

CAST-ChIP maps cell-type-specific chromatin states in the Drosophila central nervous system.

Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes

Cohesin regulates tissue-specific expression by stabilizing highly occupied cis-regulatory modules

Cross-Tissue Identification of Somatic Stem and Progenitor Cells Using a Single-Cell RNA-Sequencing Derived Gene Signature

Dissecting the brown adipogenic regulatory network using integrative genomics

Five-vertebrate ChIP-seq reveals the evolutionary dynamics of transcription factor binding

GLUT3 is induced during epithelial-mesenchymal transition and promotes tumor cell proliferation in non-small cell lung cancer

Identification of the transcription factor ZEB1 as a central component of the adipogenic gene regulatory network

Insights into hominid evolution from the gorilla genome sequence

Insights into negative regulation by the glucocorticoid receptor from genome-wide profiling of inflammatory cistromes

Latent regulatory potential of human-specific repetitive elements

MECHANISM AND EFFECTS OF PULSATILE GABA SECRETION FROM CYTOSOLIC POOLS IN THE HUMAN BETA CELL

Positive Selection in Tick Saliva Proteins of the Salp15 Family

Reversible De-differentiation of Mature White Adipocytes into Preadipocyte-like Precursors during Lactation

Systems-Genetics-Based Inference of a Core Regulatory Network Underlying White Fat Browning

Topoisomerase II beta interacts with cohesin and CTCF at topological domain borders

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages.

Waves of retrotransposon expansion remodel genome organization and CTCF binding in multiple mammalian lineages

ZFP30 promotes adipogenesis through the KAP1-mediated activation of a retrotransposon-derived Pparg2 enhancer