List of works - Sónia C S Andrade

A phylogenetic backbone for Bivalvia: an RNA-seq approach

scientific article

A transcriptomic approach to ribbon worm systematics (nemertea): resolving the pilidiophora problem.

scientific article

Articulating "Archiannelids": Phylogenomics and Annelid Relationships, with Emphasis on Meiofaunal Taxa

scientific article published on 23 July 2015

At least some meiofaunal species are not everywhere. Indication of geographic, ecological and geological barriers affecting the dispersion of species of Ototyphlonemertes (Nemertea, Hoplonemertea).

scientific article published on 3 February 2016

Biological and molecular characterization of a putative new potexvirus infecting Senna occidentalis.

scientific article

C4 and crassulacean acid metabolism within a single leaf: deciphering key components behind a rare photosynthetic adaptation

scientific article published on 16 November 2019

Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

scientific article (publication date: 29 November 2012)

Correction to: Littoraria flava (Gastropoda: Littorinidae) mitogenome: phylogenetic considerations within the Caenogastropoda and evidence of microscale local adaptation

scientific article published in 2022

Data from proteomic analysis of bovine Longissimus dorsi muscle associated with intramuscular fat content

scientific article published on 09 June 2018

Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content

scientific article

Dynamic remodeling of endometrial extracellular matrix regulates embryo receptivity in cattle.

scientific article published on 17 October 2016

Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing

scientific article published on 10 November 2015

Gene expression profiling by high throughput sequencing to determine signatures for the bovine receptive uterus at early gestation.

scientific article published on 3 June 2015

Genetic variation and population structuring in two brooding coral species (Siderastrea stellata and Siderastrea radians) from Brazil.

scientific article published on 3 August 2007

Genome-wide assessment elucidates connectivity and the evolutionary history of the highly dispersive marine invertebrate <i>Littoraria flava</i> (Littorinidae: Gastropoda)

scientific article published in 2021

Genome-wide association study reveals genes associated with the absence of intermuscular bones in tambaqui (Colossoma macropomum)

scientific article published on 01 October 2020

Germline Mutation in MUS81 Resulting in Impaired Protein Stability is Associated with Familial Breast and Thyroid Cancer

scientific article published on 20 May 2020

HABP2 p.G534E variant in patients with family history of thyroid and breast cancer

scientific article published on 29 March 2017

Hidden diversity: Phylogeography of genus Ototyphlonemertes Diesing, 1863 (Ototyphlonemertidae: Hoplonemertea) reveals cryptic species and high diversity in Chilean populations.

scientific article published on 26 April 2018

Hoplonemertean larvae are planktonic predators that capture and devour active animal prey

scientific article published in 2022

Identification of SNPs potentially related to immune responses and growth performance in Litopenaeus vannamei by RNA-seq analyses.

scientific article published on 4 July 2018

Impact of hormonal modulation at proestrus on ovarian responses and uterine gene expression of suckled anestrous beef cows

scientific article published in November 2017

Integrative transcriptome analysis identifies deregulated microRNA-transcription factor networks in lung adenocarcinoma.

scientific article published on 12 April 2016

Landscape genomics to the rescue of a tropical bee threatened by habitat loss and climate change

scientific article published on 10 April 2019

Litopenaeus vannamei Transcriptome Profile of Populations Evaluated for Growth Performance and Exposed to White Spot Syndrome Virus (WSSV).

scientific article

Littoraria flava (Gastropoda: Littorinidae) mitogenome: phylogenetic considerations within the Caenogastropoda and evidence of microscale local adaptation

scientific article published in 2022

Longissimus dorsi muscle label-free quantitative proteomic reveals biological mechanisms associated with intramuscular fat deposition.

scientific article published on 3 March 2018

Low-intensity resistance training with partial blood flow restriction and high-intensity resistance training induce similar changes in skeletal muscle transcriptome in elderly humans

scientific article published on 12 July 2018

Phylogenetic analysis of four nuclear protein-encoding genes largely corroborates the traditional classification of Bivalvia (Mollusca).

scientific article

Phylogenomic analyses of a Mediterranean earthworm family (Annelida: Hormogastridae).

scientific article published on 31 October 2015

Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda

scientific article

Population genetic structure of two columnar cacti with a patchy distribution in eastern Brazil

scientific article published on 01 November 2005

Re-evaluating the phylogeny of Sipuncula through transcriptomics

scientific article

Resolving the evolutionary relationships of molluscs with phylogenomic tools

scientific article

Revisiting metazoan phylogeny with genomic sampling of all phyla

scientific article published on 10 July 2019

SNP and INDEL detection in a QTL region on chicken chromosome 2 associated with muscle deposition

scientific article published on 18 February 2015

Shedding the Light on Litopenaeus vannamei Differential Muscle and Hepatopancreas Immune Responses in White Spot Syndrome Virus (WSSV) Exposure

scientific article published on 16 July 2020

Species delimitation integrative approach reveals three new species in the Nemertopsis bivittata complex

scholarly article published in 2021

The Receptive Endometrial Transcriptomic Signature Indicates an Earlier Shift from Proliferation to Metabolism at Early Diestrus in the Cow.

scientific article

The state of Medusozoa genomics: current evidence and future challenges

The transcriptome signature of the receptive bovine uterus determined at early gestation

scientific article

The use of metabarcoding for meiofauna ecological patterns assessment

scientific article published on 14 June 2018

Transcriptome changes in muscle of Nellore cows submitted to recovery weight gain under grazing condition

scientific article published on 09 July 2018

Variant discovery in a QTL region on chromosome 3 associated with fatness in chickens.

scientific article published on 23 January 2015

List of works by Sónia C S Andrade

A phylogenetic backbone for Bivalvia: an RNA-seq approach

A transcriptomic approach to ribbon worm systematics (nemertea): resolving the pilidiophora problem.

Articulating "Archiannelids": Phylogenomics and Annelid Relationships, with Emphasis on Meiofaunal Taxa

At least some meiofaunal species are not everywhere. Indication of geographic, ecological and geological barriers affecting the dispersion of species of Ototyphlonemertes (Nemertea, Hoplonemertea).

Biological and molecular characterization of a putative new potexvirus infecting Senna occidentalis.

C4 and crassulacean acid metabolism within a single leaf: deciphering key components behind a rare photosynthetic adaptation

Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa

Correction to: Littoraria flava (Gastropoda: Littorinidae) mitogenome: phylogenetic considerations within the Caenogastropoda and evidence of microscale local adaptation

Data from proteomic analysis of bovine Longissimus dorsi muscle associated with intramuscular fat content

Differences in the skeletal muscle transcriptome profile associated with extreme values of fatty acids content

Dynamic remodeling of endometrial extracellular matrix regulates embryo receptivity in cattle.

Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing

Gene expression profiling by high throughput sequencing to determine signatures for the bovine receptive uterus at early gestation.

Genetic variation and population structuring in two brooding coral species (Siderastrea stellata and Siderastrea radians) from Brazil.

Genome-wide assessment elucidates connectivity and the evolutionary history of the highly dispersive marine invertebrate <i>Littoraria flava</i> (Littorinidae: Gastropoda)

Genome-wide association study reveals genes associated with the absence of intermuscular bones in tambaqui (Colossoma macropomum)

Germline Mutation in MUS81 Resulting in Impaired Protein Stability is Associated with Familial Breast and Thyroid Cancer

HABP2 p.G534E variant in patients with family history of thyroid and breast cancer

Hidden diversity: Phylogeography of genus Ototyphlonemertes Diesing, 1863 (Ototyphlonemertidae: Hoplonemertea) reveals cryptic species and high diversity in Chilean populations.

Hoplonemertean larvae are planktonic predators that capture and devour active animal prey

Identification of SNPs potentially related to immune responses and growth performance in Litopenaeus vannamei by RNA-seq analyses.

Impact of hormonal modulation at proestrus on ovarian responses and uterine gene expression of suckled anestrous beef cows

Integrative transcriptome analysis identifies deregulated microRNA-transcription factor networks in lung adenocarcinoma.

Landscape genomics to the rescue of a tropical bee threatened by habitat loss and climate change

Litopenaeus vannamei Transcriptome Profile of Populations Evaluated for Growth Performance and Exposed to White Spot Syndrome Virus (WSSV).

Littoraria flava (Gastropoda: Littorinidae) mitogenome: phylogenetic considerations within the Caenogastropoda and evidence of microscale local adaptation

Longissimus dorsi muscle label-free quantitative proteomic reveals biological mechanisms associated with intramuscular fat deposition.

Low-intensity resistance training with partial blood flow restriction and high-intensity resistance training induce similar changes in skeletal muscle transcriptome in elderly humans

Phylogenetic analysis of four nuclear protein-encoding genes largely corroborates the traditional classification of Bivalvia (Mollusca).

Phylogenomic analyses of a Mediterranean earthworm family (Annelida: Hormogastridae).

Phylogenomic analyses of deep gastropod relationships reject Orthogastropoda

Population genetic structure of two columnar cacti with a patchy distribution in eastern Brazil

Re-evaluating the phylogeny of Sipuncula through transcriptomics

Resolving the evolutionary relationships of molluscs with phylogenomic tools

Revisiting metazoan phylogeny with genomic sampling of all phyla

SNP and INDEL detection in a QTL region on chicken chromosome 2 associated with muscle deposition

Shedding the Light on Litopenaeus vannamei Differential Muscle and Hepatopancreas Immune Responses in White Spot Syndrome Virus (WSSV) Exposure

Species delimitation integrative approach reveals three new species in the Nemertopsis bivittata complex

The Receptive Endometrial Transcriptomic Signature Indicates an Earlier Shift from Proliferation to Metabolism at Early Diestrus in the Cow.

The state of Medusozoa genomics: current evidence and future challenges

The transcriptome signature of the receptive bovine uterus determined at early gestation

The use of metabarcoding for meiofauna ecological patterns assessment

Transcriptome changes in muscle of Nellore cows submitted to recovery weight gain under grazing condition

Variant discovery in a QTL region on chromosome 3 associated with fatness in chickens.