List of works - Alasdair Ivens

The genome of the kinetoplastid parasite, Leishmania major

scientific article

The genome of the blood fluke Schistosoma mansoni

scientific article

Comparative genomics of trypanosomatid parasitic protozoa

scientific article (publication date: 15 July 2005)

Comparative genomic analysis of three Leishmania species that cause diverse human disease

scientific article

The genome of the simian and human malaria parasite Plasmodium knowlesi

scientific article

Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

scientific article

Genome-wide dissection of the quorum sensing signalling pathway in Trypanosoma brucei.

scientific article

Leishmania major Friedlin chromosome 1 has an unusual distribution of protein-coding genes

scientific article

Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparum

scientific article (publication date: 14 April 2009)

Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

scientific article published on 22 May 2007

Altered retinal microRNA expression profile in a mouse model of retinitis pigmentosa

scientific article published on January 2007

Anti-schistosomal intervention targets identified by lifecycle transcriptomic analyses

scientific article

Epigenetic silencing of Plasmodium falciparum genes linked to erythrocyte invasion

scientific article published in August 2007

A gene expression atlas of the domestic pig

scientific article

Genome-wide expression profiling of in vivo-derived bloodstream parasite stages and dynamic analysis of mRNA alterations during synchronous differentiation in Trypanosoma brucei

scientific article

The role of prophage-like elements in the diversity of Salmonella enterica serovars

scientific article published in May 2004

Parasite-derived microRNAs in host serum as novel biomarkers of helminth infection

scientific article published on 20 February 2014

Comparison of the A2 gene locus in Leishmania donovani and Leishmania major and its control over cutaneous infection.

scientific article published on 26 June 2003

Genomic analysis of the causative agents of coccidiosis in domestic chickens

scientific article

RamA, a member of the AraC/XylS family, influences both virulence and efflux in Salmonella enterica serovar Typhimurium.

scientific article

Combinatorial quorum sensing allows bacteria to resolve their social and physical environment

scientific article published on 04 March 2014

Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum

scientific article

The global consequence of disruption of the AcrAB-TolC efflux pump in Salmonella enterica includes reduced expression of SPI-1 and other attributes required to infect the host.

scientific article published on May 2009

Genome and phylogenetic analyses of trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty

scientific article published in January 2015

tRNAs in Trypanosoma brucei: genomic organization, expression, and mitochondrial import

scientific article

The Eimeria genome projects: a sequence of events.

scientific article published on May 2004

Comparative expression profiling of Leishmania: modulation in gene expression between species and in different host genetic backgrounds

scientific article published on 7 July 2009

Genetic nomenclature for Trypanosoma and Leishmania.

scientific article

Sex determination in the social amoeba Dictyostelium discoideum

scientific article

Gene synteny and evolution of genome architecture in trypanosomatids

article

A re-annotation of the Saccharomyces cerevisiae genome.

scientific article

Identification of a human neonatal immune-metabolic network associated with bacterial infection

scientific article

Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts

scientific article

Multiple genetic loci within 11p15 defined by Beckwith-Wiedemann syndrome rearrangement breakpoints and subchromosomal transferable fragments

scientific article

Widespread duplications in the genomes of laboratory stocks of Dictyostelium discoideum

scientific article published on 22 April 2008

Genome-wide transcriptional changes induced by phagocytosis or growth on bacteria in Dictyostelium

scientific article

Leishmania major chromosome 3 contains two long convergent polycistronic gene clusters separated by a tRNA gene

scientific article

The human homeobox gene HOX7 maps to chromosome 4p16.1 and may be implicated in Wolf-Hirschhorn syndrome.

scientific article published on 01 April 1990

Microarray-based comparative genomic analyses of the human malaria parasite Plasmodium falciparum using Affymetrix arrays

scientific article published on 8 September 2005

Extracellular Onchocerca-derived small RNAs in host nodules and blood

scientific article

Microarray analysis identifies genes preferentially expressed in the lung schistosomulum of Schistosoma mansoni

scientific article published on 15 November 2005

Structure and sequence of the human homeobox gene HOX7.

scientific article published in November 1991

Linkage of an X-chromosome cleft palate gene

scientific article published in Nature

Expression profiling of the Leishmania life cycle: cDNA arrays identify developmentally regulated genes present but not annotated in the genome

scientific article published in July 2004

Differences in the Faecal Microbiome in Schistosoma haematobium Infected Children vs. Uninfected Children

scientific article

A dominant role for the methyl-CpG-binding protein Mbd2 in controlling Th2 induction by dendritic cells

scientific article published on 24 April 2015

Characterization of the genomes of a diverse collection of Salmonella enterica serovar Typhimurium definitive phage type 104

scientific article published on 10 October 2008

Identification of core and variable components of the Salmonella enterica subspecies I genome by microarray.

scientific article published on December 2005

Differentially expressed Leishmania major gp63 genes encode cell surface leishmanolysin with distinct signals for glycosylphosphatidylinositol attachment.

scientific article published in May 1998

Sequencing and analysis of chromosome 1 of Eimeria tenella reveals a unique segmental organization

scientific article

List of works by Alasdair Ivens

The genome of the kinetoplastid parasite, Leishmania major

The genome of the blood fluke Schistosoma mansoni

Comparative genomics of trypanosomatid parasitic protozoa

Comparative genomic analysis of three Leishmania species that cause diverse human disease

The genome of the simian and human malaria parasite Plasmodium knowlesi

Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

Genome-wide dissection of the quorum sensing signalling pathway in Trypanosoma brucei.

Leishmania major Friedlin chromosome 1 has an unusual distribution of protein-coding genes

Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparum

Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes

Altered retinal microRNA expression profile in a mouse model of retinitis pigmentosa

Anti-schistosomal intervention targets identified by lifecycle transcriptomic analyses

Epigenetic silencing of Plasmodium falciparum genes linked to erythrocyte invasion

A gene expression atlas of the domestic pig

Genome-wide expression profiling of in vivo-derived bloodstream parasite stages and dynamic analysis of mRNA alterations during synchronous differentiation in Trypanosoma brucei

The role of prophage-like elements in the diversity of Salmonella enterica serovars

Parasite-derived microRNAs in host serum as novel biomarkers of helminth infection

Comparison of the A2 gene locus in Leishmania donovani and Leishmania major and its control over cutaneous infection.

Genomic analysis of the causative agents of coccidiosis in domestic chickens

RamA, a member of the AraC/XylS family, influences both virulence and efflux in Salmonella enterica serovar Typhimurium.

Combinatorial quorum sensing allows bacteria to resolve their social and physical environment

Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum

The global consequence of disruption of the AcrAB-TolC efflux pump in Salmonella enterica includes reduced expression of SPI-1 and other attributes required to infect the host.

Genome and phylogenetic analyses of trypanosoma evansi reveal extensive similarity to T. brucei and multiple independent origins for dyskinetoplasty

tRNAs in Trypanosoma brucei: genomic organization, expression, and mitochondrial import

The Eimeria genome projects: a sequence of events.

Comparative expression profiling of Leishmania: modulation in gene expression between species and in different host genetic backgrounds

Genetic nomenclature for Trypanosoma and Leishmania.

Sex determination in the social amoeba Dictyostelium discoideum

Gene synteny and evolution of genome architecture in trypanosomatids

A re-annotation of the Saccharomyces cerevisiae genome.

Identification of a human neonatal immune-metabolic network associated with bacterial infection

Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts

Multiple genetic loci within 11p15 defined by Beckwith-Wiedemann syndrome rearrangement breakpoints and subchromosomal transferable fragments

Widespread duplications in the genomes of laboratory stocks of Dictyostelium discoideum

Genome-wide transcriptional changes induced by phagocytosis or growth on bacteria in Dictyostelium

Leishmania major chromosome 3 contains two long convergent polycistronic gene clusters separated by a tRNA gene

The human homeobox gene HOX7 maps to chromosome 4p16.1 and may be implicated in Wolf-Hirschhorn syndrome.

Microarray-based comparative genomic analyses of the human malaria parasite Plasmodium falciparum using Affymetrix arrays

Extracellular Onchocerca-derived small RNAs in host nodules and blood

Microarray analysis identifies genes preferentially expressed in the lung schistosomulum of Schistosoma mansoni

Structure and sequence of the human homeobox gene HOX7.

Linkage of an X-chromosome cleft palate gene

Expression profiling of the Leishmania life cycle: cDNA arrays identify developmentally regulated genes present but not annotated in the genome

Differences in the Faecal Microbiome in Schistosoma haematobium Infected Children vs. Uninfected Children

A dominant role for the methyl-CpG-binding protein Mbd2 in controlling Th2 induction by dendritic cells

Characterization of the genomes of a diverse collection of Salmonella enterica serovar Typhimurium definitive phage type 104

Identification of core and variable components of the Salmonella enterica subspecies I genome by microarray.

Differentially expressed Leishmania major gp63 genes encode cell surface leishmanolysin with distinct signals for glycosylphosphatidylinositol attachment.

Sequencing and analysis of chromosome 1 of Eimeria tenella reveals a unique segmental organization