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Authors whose works are in public domain in at least one jurisdiction

List of works by Masato Nikaido

A retroposon analysis of Afrotherian phylogeny

scientific article

Afrotherian phylogeny as inferred from complete mitochondrial genomes

scientific article

Ancient SINEs from African endemic mammals

scientific article

Balaenoptera omurai is a newly discovered baleen whale that represents an ancient evolutionary lineage

scientific article published on 16 May 2006

CetSINEs and AREs are not SINEs but are parts of cetartiodactyl L1.

scientific article

Characterization of V1R receptor (ora) genes in Lake Victoria cichlids

scientific article

Characterization of a novel SINE superfamily from invertebrates: "Ceph-SINEs" from the genomes of squids and cuttlefish

scientific article published on 12 November 2009

Chronology of the extant African elephant species and case study of the species identification of the small African elephant with the molecular phylogenetic method

scientific article

Coelacanth genomes reveal signatures for evolutionary transition from water to land

scientific article (publication date: October 2013)

Conserved orthologous vomeronasal type 1 receptor genes among goat, sheep and cow

article

Conserved repertoire of orthologous vomeronasal type 1 receptor genes in ruminant species.

scientific article published on 15 September 2009

Erratum to “The status of the Japanese and East Asian bats of the genus Myotis (Vespertilionidae) based on mitochondrial sequences” [Mol. Phylogenet. Evol. 28 (2003) 297–307]

article

Evolution of CHR-2 SINEs in cetartiodactyl genomes: possible evidence for the monophyletic origin of toothed whales

Extensive mitochondrial gene arrangements in coleoid Cephalopoda and their phylogenetic implications

article

Extremely slow rate of evolution in the HOX cluster revealed by comparison between Tanzanian and Indonesian coelacanths

scientific article

First application of the SINE (short interspersed repetitive element) method to infer phylogenetic relationships in reptiles: an example from the turtle superfamily Testudinoidea

scientific article published on 10 March 2004

Genetic variation and demographic history of the Haplochromis laparogramma group of Lake Victoria—An analysis based on SINEs and mitochondrial DNA

article

Genetically distinct coelacanth population off the northern Tanzanian coast

scientific article (publication date: November 2011)

Genomic expansion of the Bov-A2 retroposon relating to phylogeny and breed management

Interordinal relationships and timescale of eutherian evolution as inferred from mitochondrial genome data

scientific article (publication date: 23 December 2000)

Intra- and interfamily relationships of Vespertilionidae inferred by various molecular markers including SINE insertion data

scientific article

Lineage-specific expansion of vomeronasal type 2 receptor-like (OlfC) genes in cichlids may contribute to diversification of amino acid detection systems

scientific article

Maximum Likelihood Analysis of the Complete Mitochondrial Genomes of Eutherians and a Reevaluation of the Phylogeny of Bats and Insectivores ⬇️

scientific article published on October 1, 2001

Mitochondrial phylogenetics and evolution of mysticete whales.

scientific article

Mitochondrial phylogeny of hedgehogs and monophyly of Eulipotyphla

scientific article

Molecular phylogenetic study on the origin and evolution of Mustelidae

scientific article published on 12 February 2007

Multiple episodic evolution events in V1R receptor genes of East-African cichlids

scientific article

MyrSINEs: A novel SINE family in the anteater genomes

article

New candidate species most closely related to penguins

scientific article

Newly discovered young CORE-SINEs in marsupial genomes

scientific article published on 12 October 2007

Phylogenetic analysis of diprotodontian marsupials based on complete mitochondrial genomes

scientific article

Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: hippopotamuses are the closest extant relatives of whales

scientific article

Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Baleen whale phylogeny and a past extensive radiation event revealed by SINE insertion analysis

scientific article published on 5 December 2005

Retroposon analysis of major cetacean lineages: the monophyly of toothed whales and the paraphyly of river dolphins

scientific article

The complete mitochondrial genomes of deep-sea squid (Bathyteuthis abyssicola), bob-tail squid (Semirossia patagonica) and four giant cuttlefish (Sepia apama, S. latimanus, S. lycidas and S. pharaonis), and their application to the phylogenetic anal

scientific article published on 26 June 2013

The genomic substrate for adaptive radiation in African cichlid fish

scientific article

The rise and fall of the CR1 subfamily in the lineage leading to penguins

scientific article published on 20 December 2005

The status of the Japanese and East Asian bats of the genus Myotis (Vespertilionidae) based on mitochondrial sequences

article

Toothed whale monophyly reassessed by SINE insertion analysis: the absence of lineage sorting effects suggests a small population of a common ancestral species

scientific article published on 17 August 2006

Unique Mammalian tRNA-Derived Repetitive Elements in Dermopterans: The t-SINE Family and Its Retrotransposition Through Multiple Sources

scientific article published on 28 July 2003

Vertebrate rhodopsin adaptation to dim light via rapid meta-II intermediate formation

scientific article published on 25 October 2009

Éléments mobiles SINE en phylogénie

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