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List of works by Michael Baym

Barcode extension for analysis and reconstruction of structures

scientific article published on 13 March 2017

Barcoded microbial system for high-resolution object provenance

scientific article published on 01 June 2020

Changing fitness effects of mutations through long-term bacterial evolution

scientific article published on 25 January 2024

Compounds that select against the tetracycline-resistance efflux pump

scientific article (publication date: November 2016)

Compressive genomics

scientific article

Compressive genomics for protein databases

scientific article

Conserved quantities and adaptation to the edge of chaos

article published in 2006

Decreased thermal niche breadth as a trade-off of antibiotic resistance

scientific article published in 2022

Delayed commitment to evolutionary fate in antibiotic resistance fitness landscapes

scientific article

Engineered bacteria can function in the mammalian gut long-term as live diagnostics of inflammation

scientific article published on 29 May 2017

Escape mutations circumvent a tradeoff between resistance to a beta-lactam and resistance to a beta-lactamase inhibitor

scientific article published on 24 April 2020

Inexpensive multiplexed library preparation for megabase-sized genomes

scientific article published on 22 May 2015

IsoBase: a database of functionally related proteins across PPI networks

scientific article

IsoRankN: spectral methods for global alignment of multiple protein networks

scientific article published on June 2009

Large-scale identification of genetic design strategies using local search

scientific article published on 18 August 2009

Metastable hybridization-based DNA information storage to allow rapid and permanent erasure

scientific article published on 06 October 2020

Multidrug evolutionary strategies to reverse antibiotic resistance

scientific article

Mycobacterial nucleoid-associated protein Lsr2 is required for productive mycobacteriophage infection

scientific article published in April 2023

Prophage-encoded phage defense proteins with cognate self-immunity

scientific article published on 13 July 2020

Rapid construction of a whole-genome transposon insertion collection for Shewanella oneidensis by Knockout Sudoku

scientific article

Rapid curation of gene disruption collections using Knockout Sudoku.

scientific article

Rapid inference of antibiotic resistance and susceptibility by genomic neighbour typing

scientific article published on 10 February 2020

Spatiotemporal microbial evolution on antibiotic landscapes

scientific article

The Separatrix Algorithm for synthesis and analysis of stochastic simulations with applications in disease modeling

scientific article

The fitness landscape of the African Salmonella Typhimurium ST313 strain D23580 reveals unique properties of the pBT1 plasmid

scientific article published on 27 September 2019

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