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List of works by Koen Van den Berge

A general and powerful stage-wise testing procedure for differential expression and differential transcript usage

Non-neural expression of SARS-CoV-2 entry genes in the olfactory epithelium suggests mechanisms underlying anosmia in COVID-19 patients

scientific article (preprint)

Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia

scientific article published on 24 July 2020

Observation weights unlock bulk RNA-seq tools for zero inflation and single-cell applications.

scientific article published on 26 February 2018

Strain-specific transcriptional responses overshadow salinity effects in a marine diatom sampled along the Baltic Sea salinity cline

scientific article published in 2022

Trajectory-based differential expression analysis for single-cell sequencing data

scientific article published on 05 March 2020

stageR: a general stage-wise method for controlling the gene-level false discovery rate in differential expression and differential transcript usage

scientific article

zingeR: unlocking RNA-seq tools for zero-inflation and single cell applications

scholarly article published 30 June 2017

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