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List of works by Michael Kühl

'Candidatus Thermochlorobacter aerophilum:' an aerobic chlorophotoheterotrophic member of the phylum Chlorobi defined by metagenomics and metatranscriptomics

scientific article

A H2S microsensor for profiling biofilms and sediments: application in an acidic lake sediment

scientific article published in 1998

A Microsensor Study of the Interaction between Purple Sulfur and Green Sulfur Bacteria in Experimental Benthic Gradients

scientific article published in April 1999

A Novel Epiphytic Chlorophyll d-containing Cyanobacterium Isolated from a Mangrove-associated Red Alga

scientific article

A laboratory study on O2 dynamics and photosynthesis in ice algal communities: quantification by microsensors, O2 exchange rates, 14C incubations and a PAM fluorometer

scientific article published in 2002

A microoptode array for fine-scale measurement of oxygen distribution

scientific article published in January 1997

A microsensor study of light enhanced Ca2+ uptake and photosynthesis in the reef-building hermatypic coral Favia sp

scientific article published in 2000

A modular luminescence lifetime imaging system for mapping oxygen distribution in biological samples

scientific article published in August 1998

A simple laminated paper-based sensor for temperature sensing and imaging

scientific article published in April 2015

A simple light meter for measurements of PAR (400 to 700 nm) with fiber-optic microprobes: application for P vs E0(PAR) measurements in a microbial mat

scientific article published in 1997

A simple optode based method for imaging O2 distribution and dynamics in tap water biofilms

scientific article

A system for imaging variable chlorophyll fluorescence of aquatic phototrophs

scientific article published in August 2004

APPARENT LIGHT REQUIREMENT FOR ACTIVATION OF PHOTOSYNTHESIS UPON REHYDRATION OF DESICCATED BEACHROCK MICROBIAL MATS1

scientific article published in February 2002

Adaptation, test and in situ measurements with O2 microopt(r)odes on benthic landers

scientific article published in January 1999

Aerotaxis in Desulfovibrio

scientific article published in December 1999

Algal species and light microenvironment in a low-pH, geothermal microbial mat community

scientific article

An Amperometric Microsensor for the Determination of H2S in Aquatic Environments

scientific article published in 1996

An endoevaporitic microbial mat within a gypsum crust:zonation of phototrophs, photopigments, and light penetration

scientific article published in 1995

An in situ instrument for planar O2optode measurements at benthic interfaces

scientific article published in November 2001

Anoxic aggregates - an ephemeral phenomenon in the pelagic environment?

scientific article published in 1997

Author Correction: Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring

scientific article published on 27 November 2019

Bacteria are not too small for spatial sensing of chemical gradients: an experimental evidence

scientific article

Benthic diatoms of a high Arctic fjord (Young Sound, NE Greenland): importance for ecosystem primary production

scientific article published in 2002

Benthic microalgal production in the Arctic: applied methods and status of the current database

scientific article published in January 2009

Biofilm growth and near-infrared radiation-driven photosynthesis of the chlorophyll d-containing cyanobacterium Acaryochloris marina

scientific article

Biogeochemistry of an iron-rich hypersaline microbial mat (Camargue, France).

scientific article published on 21 December 2004

Biomass, production and horizontal patchiness of sea ice algae in a high-Arctic fjord (Young Sound, NE Greenland)

article

Bionic 3D printed corals

scientific article published on 09 April 2020

CORAL PHOTOBIOLOGY STUDIED WITH A NEW IMAGING PULSE AMPLITUDE MODULATED FLUOROMETER1

CaCO3 precipitation in multilayered cyanobacterial mats: clues to explain the alternation of micrite and sparite layers in calcareous stromatolites

scientific article

Characterization and application of temperature micro-optodes for use in aquatic biology

scientific article published on 7 May 1997

Characterization of functional bacterial groups in a hypersaline microbial mat community (Salins-de-Giraud, Camargue, France).

scientific article published in December 2004

Chlorophyll d: the puzzle resolved.

scientific article

Combined imaging of bacteria and oxygen in biofilms

scientific article

Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential.

scientific article

Complete genome sequence of the cystic fibrosis pathogen Achromobacter xylosoxidans NH44784-1996 complies with important pathogenic phenotypes

scientific article published in 2013

Complex pattern formation of marine gradient bacteria explained by a simple computer model

scientific article published in May 2005

Conspicuous veils formed by vibrioid bacteria on sulfidic marine sediment

scientific article published on December 2002

Contrasting impacts of light reduction on sediment biogeochemistry in deep- and shallow-water tropical seagrass assemblages (Green Island, Great Barrier Reef).

scientific article published on 12 February 2018

Conversion and conservation of light energy in a photosynthetic microbial mat ecosystem

scientific article published on 12 November 2009

Cyanobacterial ecotypes in different optical microenvironments of a 68 degrees C hot spring mat community revealed by 16S-23S rRNA internal transcribed spacer region variation

scientific article

Cyanobacterial ecotypes in the microbial mat community of Mushroom Spring (Yellowstone National Park, Wyoming) as species-like units linking microbial community composition, structure and function

scientific article published on November 2006

Development and comparison of pH microoptodes for use in marine systems

scientific article published on 31 March 1997

Development of a rechargeable optical hydrogen peroxide sensor - sensor design and biological application

scientific article published on 17 May 2016

Diel variations in carbon metabolism by green nonsulfur-like bacteria in alkaline siliceous hot spring microbial mats from Yellowstone National Park

scientific article

Differences in the optical properties of valve and girdle band in a centric diatom

scientific article published on 14 December 2018

Different bacterial communities associated with the roots and bulk sediment of the seagrass Zostera marina

scientific article

Different carbon isotope fractionation patterns during the development of phototrophic freshwater and marine biofilms

scientific article published on 8 August 2007

Diffusion or advection? Mass transfer and complex boundary layer landscapes of the brown alga Fucus vesiculosus.

scientific article published in March 2017

Diffusive boundary layers and photosynthesis of the epilithic algal community of coral reefs

scientific article published on 25 March 2003

Disentangling compartment functions in sessile marine invertebrates

scientific article published in 2022

Divergent expression of hypoxia response systems under deoxygenation in reef-forming corals aligns with bleaching susceptibility

scientific article published on 16 November 2020

Diversity and distribution in hypersaline microbial mats of bacteria related to Chloroflexus spp.

scientific article

Diversity of phototrophic bacteria in microbial mats from Arctic hot springs (Greenland).

scientific article

Ecology: a niche for cyanobacteria containing chlorophyll d.

scientific article

Effects of flow and colony morphology on the thermal boundary layer of corals

scientific article

Endolithic chlorophyll d-containing phototrophs.

scientific article published on 16 December 2010

Extreme emission of n(2)o from tropical wetland soil (pantanal, South america).

scientific article

Fabrication and test of sol–gel based planar oxygen optodes for use in aquatic sediments

scientific article published in December 2005

Fiber-Optic Probes for Small-Scale Measurements of Scalar Irradiance

scientific article

Fiber-optic fluorometer for microscale mapping of photosynthetic pigments in microbial communities.

scientific article

Fiber-optic oxygen microsensors, a new tool in aquatic biology

scientific article published in September 1995

Fine-scale distribution patterns of Synechococcus ecological diversity in microbial mats of Mushroom Spring, Yellowstone National Park

scientific article published on 2 September 2011

Fine-scale measurement of diffusivity in a microbial mat with nuclear magnetic resonance imaging

Flow and Coral Morphology Control Coral Surface pH: Implications for the Effects of Ocean Acidification

Functional and structural imaging of phototrophic microbial communities and symbioses

scientific article published on 18 September 2008

General theory of three-dimensional radiance measurements with optical microprobes

scientific article published in September 1997

Genomics, environmental genomics and the issue of microbial species.

scientific article published on 6 June 2007

Green fluorescent protein-like pigments optimise the internal light environment in symbiotic reef-building corals

scientific article published on 08 July 2022

Growth and chemosensory behavior of sulfate-reducing bacteria in oxygen-sulfide gradients

scientific article published in April 2002

Growth of green sulphur bacteria in experimental benthic oxygen, sulphide, pH and light gradients

scientific article published in April 1998

HETEROGENEITY OF OXYGEN PRODUCTION AND CONSUMPTION IN A PHOTOSYNTHETIC MICROBIAL MAT AS STUDIED BY PLANAR OPTODES

scientific article published in April 1999

Heat budget and thermal microenvironment of shallow-water corals: Do massive corals get warmer than branching corals?

scientific article published in July 2008

Highly photostable near-infrared fluorescent pH indicators and sensors based on BF2-chelated tetraarylazadipyrromethene dyes

scientific article published on 12 July 2012

IMAGING OF OXYGEN DYNAMICS WITHIN THE ENDOLITHIC ALGAL COMMUNITY OF THE MASSIVE CORAL PORITES LOBATA(1).

scientific article published on June 2008

IMPORTANCE OF MACRO- VERSUS MICROSTRUCTURE IN MODULATING LIGHT LEVELS INSIDE CORAL COLONIES(1).

scientific article

Identification of "Candidatus Thioturbo danicus," a microaerophilic bacterium that builds conspicuous veils on sulfidic sediments

scientific article

Imaging of surface O2 dynamics in corals with magnetic micro optode particles

scientific article published on 24 March 2012

In Situ Hydrogen Dynamics in a Hot Spring Microbial Mat during a Diel Cycle

scientific article

In situ Dynamics of O2, pH, Light, and Photosynthesis in Ikaite Tufa Columns (Ikka Fjord, Greenland)-A Unique Microbial Habitat

scientific article

In situ analysis of nitrogen fixation and metabolic switching in unicellular thermophilic cyanobacteria inhabiting hot spring microbial mats

scholarly article

In situ dynamics of O2, pH and cyanobacterial transcripts associated with CCM, photosynthesis and detoxification of ROS

scientific article

In situ methods for assessment of microorganisms and their activities.

scientific article

In situ thermal dynamics of shallow water corals is affected by tidal patterns and irradiance

article

In vivo imaging of coral tissue and skeleton with optical coherence tomography

scientific article

In-vivo imaging of O2 dynamics on coral surfaces spray-painted with sensor nanoparticles

scientific article published in December 2016

Inter-polyp genetic and physiological characterisation of Symbiodinium in an Acropora valida colony

scientific article published in 2007

Intra-colonial variability in light acclimation of zooxanthellae in coral tissues of Pocillopora damicornis

article by K. E. Ulstrup et al published 3 May 2006 in Marine Biology

Irradiance and temperature regulation of oxygenic photosynthesis and O 2 consumption in a hypersaline cyanobacterial mat (Solar Lake, Egypt)

scientific article published on 18 August 2000

Isolation and gene quantification of heterotrophic N2-fixing bacterioplankton in the Baltic Sea.

scientific article

Kleptoplast distribution, photosynthetic efficiency and sequestration mechanisms in intertidal benthic foraminifera

scientific article published in 2021

Kleptoplast photosynthesis is nutritionally relevant in the sea slug Elysia viridis.

scientific article published on 10 August 2017

Light Sheet Microscopy Imaging of Light Absorption and Photosynthesis Distribution in Plant Tissue

scientific article

Light and O2 microenvironments in two contrasting diatom-dominated coastal sediments

scientific article published on 8 March 2016

Light gradients and optical microniches in coral tissues

scientific article

Light microclimate of endolithic phototrophs in the scleractinian corals Montipora monasteriata and Porites cylindrica

scientific article published in 2007

Light microenvironment and single-cell gradients of carbon fixation in tissues of symbiont-bearing corals

scientific article

Light penetration and light intensity in sandy marine sediments measured with irradiance and scalar irradiance fiber-optic microprobes

scientific article published in 1994

Light utilization efficiency in photosynthetic microbial mats

scientific article published on 19 December 2011

Linking soil O2, CO2, and CH4 concentrations in a Wetland soil: implications for CO2 and CH4 fluxes

Loss of Functional Photosystem II Reaction Centres in Zooxanthellae of Corals Exposed to Bleaching Conditions: Using Fluorescence Rise Kinetics

scientific article published in 2004

MICROENVIRONMENTAL CONTROL OF PHOTOSYNTHESIS AND PHOTOSYNTHESIS-COUPLED RESPIRATION IN AN EPILITHIC CYANOBACTERIAL BIOFILM1

scientific article published in October 1996

MICROSENSOR MEASUREMENTS OF THE EXTERNAL AND INTERNAL MICROENVIRONMENT OF FUCUS VESICULOSUS (PHAEOPHYCEAE)1

scientific article published on 27 September 2010

MICROX II: a new generation of portable measuring systems for micro-optodes

scientific article published on 18 June 1998

Measurement of chlorophyll fluorescence within leaves using a modified PAM Fluorometer with a fiber-optic microprobe

scientific article published in January 1996

Measuring light scattering and absorption in corals with Inverse Spectroscopic Optical Coherence Tomography (ISOCT): a new tool for non-invasive monitoring

scientific article published on 02 October 2019

Micro-optodes: the role of fibre tip geometry for sensor performance

scientific article published on 18 June 1998

Microbial diversity of biofilm communities in microniches associated with the didemnid ascidian Lissoclinum patella

scientific article

Microbial mats on the Orkney Islands revisited: microenvironment and microbial community composition.

scientific article

Microbially mediated sulphide production in a thermal, acidic algal mat community in Yellowstone National Park

scientific article published in October 2003

Microenvironment and photosynthesis of zooxanthellae in scleractinian corals studied with microsensors for O2, pH and light

scientific article published in 1995

Microenvironmental Ecology of the Chlorophyll b-Containing Symbiotic Cyanobacterium Prochloron in the Didemnid Ascidian Lissoclinum patella

scientific article (publication date: 2012)

Microenvironmental changes support evidence of photosynthesis and calcification inhibition in Halimeda under ocean acidification and warming

article

Microscopic examination of distribution and phenotypic properties of phylogenetically diverse Chloroflexaceae-related bacteria in hot spring microbial mats

scientific article

Microsensor studies of photosynthesis and respiration in larger symbiotic foraminifera. I The physico-chemical microenvironment of Marginopora vertebralis, Amphistegina lobifera and Amphisorus hemprichii

scientific article published on 16 October 2000

Microsensor studies of photosynthesis and respiration in the symbiotic foraminifer Orbulina universa

scientific article published on 28 July 1998

Motility of Marichromatium gracile in Response to Light, Oxygen, and Sulfide ⬇️

scientific article published on December 1, 2001

Multiphysics modelling of photon, mass and heat transfer in coral microenvironments

scientific article published on 01 September 2021

Nanoparticle-based measurements of pH and O2 dynamics in the rhizosphere of Zostera marina L.: effects of temperature elevation and light-dark transitions

scientific article

New insights into Mediterranean cold seep ecosystems: editorial comment on the feature article by Ritt et al

scientific article published on 27 March 2011

Niche specialization of reef-building corals in the mesophotic zone: metabolic trade-offs between divergent Symbiodinium types.

scientific article published on 24 November 2010

Optical Properties of Corals Distort Variable Chlorophyll Fluorescence Measurements

scientific article published on 28 January 2019

Optical measurement of oxygen and temperature in microscale: strategies and biological applications

scientific article published in January 1997

Optical microsensors for analysis of microbial communities

scientific article published in January 2005

Oxic microzones and radial oxygen loss from roots of Zostera marina

scientific article published in 2005

PRIMARY PRODUCTION OF CRUSTOSE CORALLINE RED ALGAE IN A HIGH ARCTIC FJORD1

scientific article published in April 2002

PhenoChip: A single-cell phenomic platform for high-throughput photophysiological analyses of microalgae

scientific article published on 02 September 2020

Photo-Protection in the Centric Diatom Coscinodiscus granii is Not Controlled by Chloroplast High-Light Avoidance Movement

Photobiology of endolithic microorganisms in living coral skeletons: 1. Pigmentation, spectral reflectance and variable chlorophyll fluorescence analysis of endoliths in the massive corals Cyphastrea serailia, Porites lutea and Goniastrea australensi

article

Photosynthesis from stolen chloroplasts can support sea slug reproductive fitness

scientific article published on 29 September 2021

Photosynthetic Acclimation of Symbiodinium in hospite Depends on Vertical Position in the Tissue of the Scleractinian Coral Montastrea curta

scientific article

Photosynthetic capacity in seagrass seeds and early‐stage seedlings of <i>Zostera marina</i>

scientific article published in 2023

Photosynthetic performance of surface-associated algae below sea ice as measured with a pulse-amplitude-modulated (PAM) fluorometer and O2 microsensors

scientific article published in 2001

Polymorphonuclear leukocytes restrict growth of Pseudomonas aeruginosa in the lungs of cystic fibrosis patients

scientific article

Pronounced gradients of light, photosynthesis and O2 consumption in the tissue of the brown alga Fucus serratus

scientific article

Propagation of electromagnetic radiation in mitochondria?

scientific article published in September 2004

Quantitative measurement and visualization of biofilm O2 consumption rates in membrane filtration systems

scientific article published in March 2012

Radiative Energy Budgets of Phototrophic Surface-Associated Microbial Communities and their Photosynthetic Efficiency Under Diffuse and Collimated Light

scientific article

Radiative energy budget reveals high photosynthetic efficiency in symbiont-bearing corals

scientific article published on 29 January 2014

Rapid TaqMan-based quantification of chlorophyll d-containing cyanobacteria in the genus Acaryochloris

scientific article

Rapid assessment of different oxygenic phototrophs and single-cell photosynthesis with multicolour variable chlorophyll fluorescence imaging

scientific article published on 9 March 2011

Rapid mass movement of chloroplasts during segment formation of the calcifying siphonalean green alga, Halimeda macroloba

scientific article

Reactive oxygen production induced by near-infrared radiation in three strains of the Chl d-containing cyanobacterium Acaryochloris marina.

scientific article

Regulation of Intertidal Microphytobenthos Photosynthesis Over a Diel Emersion Period Is Strongly Affected by Diatom Migration Patterns

scientific article

Regulation of nif gene expression and the energetics of N2 fixation over the diel cycle in a hot spring microbial mat.

scientific article

Regulation of photosynthesis and oxygen consumption in a hypersaline cyanobacterial mat (Camargue, France) by irradiance, temperature and salinity

scientific article published in February 2006

Relative importance of H2 and H2S as energy sources for primary production in geothermal springs

scientific article published on 18 July 2008

SALINITY-DEPENDENT LIMITATION OF PHOTOSYNTHESIS AND OXYGEN EXCHANGE IN MICROBIAL MATS

scholarly article by Ferran Garcia-Pichel et al published April 1999 in Journal of Phycology

Sediment Resuspension and Deposition on Seagrass Leaves Impedes Internal Plant Aeration and Promotes Phytotoxic H2S Intrusion

scientific article

Short-term temperature effects on oxygen and sulfide cycling in a hypersaline cyanobacterial mat (Solar Lake, Egypt)

scientific article published in 2000

Soil heterogeneity effects on O2 distribution and CH4 emissions from wetlands: In situ and mesocosm studies with planar O2 optodes and membrane inlet mass spectrometry

Solution of the inverse problem of radiative transfer on the basis of measured internal fluxes

scientific article published in January 1998

Spatial patterns and links between microbial community composition and function in cyanobacterial mats

scientific article

Spectral effects on Symbiodinium photobiology studied with a programmable light engine

scientific article

Strong leaf surface basification and CO2 limitation of seagrass induced by epiphytic biofilm microenvironments

scientific article published on 09 September 2019

Substantial near-infrared radiation-driven photosynthesis of chlorophyll f-containing cyanobacteria in a natural habitat

scientific article published on 21 January 2020

Temporal metatranscriptomic patterning in phototrophic Chloroflexi inhabiting a microbial mat in a geothermal spring

scientific article (publication date: September 2013)

Temporal patterns in effective quantum yield of individual zooxanthellae expelled during bleaching

scientific article published in 2005

The Consequences of Being in an Infectious Biofilm: Microenvironmental Conditions Governing Antibiotic Tolerance.

scientific article published on 12 December 2017

The Fate of the Submarine Ikaite Tufa Columns in Southwest Greenland Under Changing Climate Conditions

scholarly article by M. O. Hansen et al published 18 July 2011 in Journal of Sedimentary Research

The chemical microenvironment of the symbiotic planktonic foraminiferOrbulina universa

scientific article published in March 2005

The in vivo biofilm

scientific article published on 02 July 2013

The molecular dimension of microbial species: 1. Ecological distinctions among, and homogeneity within, putative ecotypes of Synechococcus inhabiting the cyanobacterial mat of Mushroom Spring, Yellowstone National Park

scientific article

The potent respiratory system of Osedax mucofloris (Siboglinidae, Annelida)--a prerequisite for the origin of bone-eating Osedax?

scientific article (publication date: 2012)

The responses of photosynthesis and oxygen consumption to short-term changes in temperature and irradiance in a cyanobacterial mat (Ebro Delta, Spain)

scientific article published in August 2000

Theory of equidistant three-dimensional radiance measurements with optical microprobes

scientific article published in January 1996

Tools for studying growth patterns and chemical dynamics of aggregated Pseudomonas aeruginosa exposed to different electron acceptors in an alginate bead model.

scientific article published on 19 February 2018

Ultrabright planar optodes for luminescence life-time based microscopic imaging of O2 dynamics in biofilms

scientific article published in April 2011

Variation in photosynthesis and respiration in geographically distinct populations of two reef‑building coral species

article

Zooxanthellae harvested by ciliates associated with brown band syndrome of corals remain photosynthetically competent

scientific article published on 26 January 2007

pH profiles of the extremely alkaline hindguts of soil-feeding termites (Isoptera: Termitidae) determined with microelectrodes

scientific article published in November 1996

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