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List of works by Yolanda Gil

A Controlled Crowdsourcing Approach for Practical Ontology Extensions and Metadata Annotations

scientific article published in 2017

A Framework for Efficient Data Analytics through Automatic Configuration and Customization of Scientific Workflows

scientific article published in December 2011

A Semantic, Task-Centered Collaborative Framework for Science

scientific article published in 2015

A Task-Centered Framework for Computationally-Grounded Science Collaborations

scientific article published in August 2015

A Task-Centered Interface for On-Line Collaboration in Science

scientific article published on 29 March 2015

A formal framework for combining natural instruction and demonstration for end-user programming

scientific article published in 2011

A new approach for publishing workflows

A personal visual comfort model: predict individual’s visual comfort using occupant eye pupil size and machine learning

scientific article published in September 2019

A scientific workflow construction command line

scientific article published on 8 February 2009

A semantic framework for automatic generation of computational workflows using distributed data and component catalogues

scientific article published in December 2011

A short study on the success of the Gene Ontology

2004 article

A survey of trust in computer science and the Semantic Web

scientific article published in June 2007

Abstract, link, publish, exploit: An end to end framework for workflow sharing

An Integrated Framework for Parameter-based Optimization of Scientific Workflows

scientific article published on 01 January 2009

An initial analysis of semantic wikis

scientific article published on 19 March 2013

An intelligent interface for integrating climate, hydrology, agriculture, and socioeconomic models

scientific article published on 16 March 2019

An introduction to the special issue on Geoscience Papers of the Future

Analyzing the Gap between Workflows and their Natural Language Descriptions

Applying W3C PROV to Express Geospatial Provenance at Feature and Attribute Level

scientific article published in 2015

Artificial Intelligence. Amplify scientific discovery with artificial intelligence

scientific article published in October 2014

Artificial intelligence and grids: workflow planning and beyond

scientific article published in January 2004

Atlas poznawczy: W stronę fundamentów wiedzy w neurokognitywistyce

scientific article published in 2016

Automatically composed workflows for grid environments

scientific article published in July 2004

Capturing Common Knowledge about Tasks: Intelligent Assistance for To-Do Lists

scholarly article

Challenges for Provenance Analytics Over Geospatial Data

Common motifs in scientific workflows: An empirical analysis

Common motifs in scientific workflows: An empirical analysis

Comparison between agar dilution and three other methods for determining the susceptibility of 228 clinical isolates of non-fermenting gram-negative rods

scientific article published on 5 May 2009

Cyber-Innovated Watershed Research at the Shale Hills Critical Zone Observatory

DRAT: An Unobtrusive, Scalable Approach to Large Scale Software License Analysis

scientific article published in November 2015

Designing a road map for geoscience workflows

Designing and parameterizing a workflow for optimization: A case study in biomedical imaging

scientific article published in April 2008

Detecting common scientific workflow fragments using templates and execution provenance

Determining the Trustworthiness of New Electronic Contracts

Diseases associated with bloodstream infections caused by the new species included in the old Streptococcus bovis group

scientific article published on February 28, 2012

Dynamically Generated Metadata and Replanning by Interleaving Workflow Generation and Execution

scientific article published in February 2016

ENIGMA and global neuroscience: A decade of large-scale studies of the brain in health and disease across more than 40 countries

scientific article published on 20 March 2020

Embedding the Scientific Record on the Web: Towards Automating Scientific Discoveries

scientific article

Enhancing reproducibility for computational methods

scientific article published in December 2016

Evaluation of the OntoSoft Ontology for describing metadata for legacy hydrologic modeling software

scholarly article by Bakinam T. Essawy et al published June 2017 in Environmental Modelling and Software

Examining the Challenges of Scientific Workflows

Explanation-based learning:A problem solving perspective

scientific article published in September 1989

Expressive Reusable Workflow Templates

scientific article published in December 2009

FAIR Computational Workflows

FragFlow Automated Fragment Detection in Scientific Workflows

Guest editors' introduction: E-Science

article published in 2004

HPC AND GRID COMPUTING FOR INTEGRATIVE BIOMEDICAL RESEARCH

scientific article (publication date: August 2009)

Human Tutorial Instruction in the Raw

scientific article published on 25 March 2015

Improving the design of intelligent acquisition interfaces for collecting world knowledge from web contributors

scientific article published in 2005

Incorporating tutoring principles into interactive knowledge acquisition

scientific article published in October 2007

Intelligent Optimization of Parallel and Distributed Applications

scientific article published in March 2007

Intelligent systems for geosciences

scientific article published on 19 December 2018

Interactive knowledge capture in the new millennium: how the Semantic Web changed everything

scientific article published on 7 February 2011

Introduction to the special issue of JWS with selected papers from ISWC 2005

scientific article published in March 2007

Knowledge capture in the wild

scientific article published on 16 July 2013

Knowledge entry as the graphical assembly of components

Large-scale multimedia content analysis using scientific workflows

scientific article published on 21 October 2013

LinkedDataLens

Making data analysis expertise broadly accessible through workflows

scientific article published in 2011

Managing Large-Scale Scientific Workflows in Distributed Environments: Experiences and Challenges

scientific article published in December 2006

Mapping Semantic Workflows to Alternative Workflow Execution Engines

scientific article published in September 2013

Mind Your Metadata: Exploiting Semantics for Configuration, Adaptation, and Provenance in Scientific Workflows

scientific article published in 2011

On agents and grids: Creating the fabric for a new generation of distributed intelligent systems

scientific article published in June 2006

On the black art of designing computational workflows

scientific article published in 2007

OntoSoft: A distributed semantic registry for scientific software

2016 scientific article

OntoSoft: Capturing Scientific Software Metadata

Open data: crediting a culture of cooperation

scientific article published on November 2013

PSM-Flow: Probabilistic Subgraph Mining for Discovering Reusable Fragments in Workflows

scientific article published in December 2018

PaCTS 1.0: A Crowdsourced Reporting Standard for Paleoclimate Data

scientific article published in October 2019

Parameterized Specification, Configuration and Execution of Data-Intensive Scientific Workflows

scientific article

Pegasus: A Framework for Mapping Complex Scientific Workflows onto Distributed Systems

Perspectives on automated composition of workflows in the life sciences

scientific article

Pleural empyema due to Arcanobacterium haemolyticum

scientific article published in February 2006

Principles for interactive acquisition and validation of workflows

scientific article published in June 2010

Provenance trails in the Wings/Pegasus system

scientific article published in 2008

Pseudomonas aeruginosa and carbapenems: the urgent need to harmonise disagreeing breakpoints

scientific article published on 01 September 2011

Pyleoclim: Paleoclimate Timeseries Analysis and Visualization With Python

scientific article published in 2022

Quantifying reproducibility in computational biology: the case of the tuberculosis drugome

scientific article

Re-Using Workflow Fragments across Multiple Data Domains

scientific article published in November 2012

Reflections on Successful Research in Artificial Intelligence: An Interview with Yolanda Gil

scientific article published on 20 December 2019

Reports of the AAAI 2014 Conference Workshops

Reports on the 2012 AAAI Fall Symposium Series

Reports on the 2013 AAAI Fall Symposium Series

Reproducibility in computer vision: Towards open publication of image analysis experiments as semantic workflows

scientific article published in October 2016

Requirements for Provenance on the Web

Retrieval of Semantic Workflows with Knowledge Intensive Similarity Measures

scientific article published in 2011

Scientific Software as Workflows: From Discovery to Distribution

scientific article published in July 2008

Scientific workflows in data analysis: Bridging expertise across multiple domains

scientific article published in October 2017

Selecting embryos with the highest implantation potential using data mining and decision tree based on classical embryo morphology and morphokinetics

scientific article

Self-Configuring Applications for Heterogeneous Systems: Program Composition and Optimization Using Cognitive Techniques

scientific article published in May 2008

Semantic Metadata Generation for Large Scientific Workflows

scientific article published in ISWC 2006

Semantic Software Metadata for Workflow Exploration and Evolution

scientific article published in October 2018

Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility

scientific article published on 01 January 2019

Shortipedia: aggregating and curating Semantic Web data

scientific article published on 05 July 2011

Similarity assessment and efficient retrieval of semantic workflows

scientific article published in March 2014

Simplifying construction of complex workflows for non-expert users of the Southern California Earthquake Center Community Modeling Environment

scholarly article by Philip J. Maechling et al published 1 September 2005 in ACM SIGMOD Record

Social Knowledge Collection

Soft tissue infections caused by Actinomyces neuii, a rare pathogen

scientific article published on 24 February 2010

Special Issue of the Journal of Web Semantics on Geospatial Semantics

scientific article published in December 2015

Special Issue: The First Provenance Challenge

article

Structured analysis of the ISI Atomic Pair Actions dataset using workflows

scientific article published in November 2013

Supporting Open Collaboration in Science Through Explicit and Linked Semantic Description of Processes

scientific article published in 2015

Task scheduling strategies for workflow-based applications in grids

scientific article published in 2005

Teaching Parallelism without Programming: A Data Science Curriculum for Non-CS Students

scientific article published in November 2014

TellMe

scientific article published in 2011

Ten simple rules for the care and feeding of scientific data

scientific article

The Democratization of Semantic Properties: An Analysis of Semantic Wikis

scientific article published on 06 January 2014

The Open Provenance Model core specification (v1.1)

article

The Provenance Bee Wiki

scientific article published on 7 October 2015

The cognitive atlas: toward a knowledge foundation for cognitive neuroscience

scientific article

The genetic architecture of the human cerebral cortex

The genetic architecture of the human cerebral cortex

scientific article

Thoughtful artificial intelligence: Forging a new partnership for data science and scientific discovery

scientific article published on 8 December 2017

Time-bound analytic tasks on large datasets through dynamic configuration of workflows

scientific article published on 17 November 2013

Toward the Geoscience Paper of the Future: Best practices for documenting and sharing research from data to software to provenance

article

Towards Automated Hypothesis Testing in Neuroscience

scientific article published in 2019

Towards Automatic Generation of Portions of Scientific Papers for Large Multi-Institutional Collaborations Based on Semantic Metadata

Towards Automating Data Narratives

scientific article published on 7 March 2017

Towards Workflow Ecosystems through Semantic and Standard Representations

scholarly article published November 2014

Towards content trust of web resources

scientific article published in December 2007

Towards content trust of web resources

scientific article published in 2006

Towards human-guided machine learning

scientific article published on 17 March 2019

Towards intelligent assistance for to-do lists

scientific article published in 2008

Towards method-independent knowledge acquisition

scientific article published in June 1994

Towards task-centered network models through semantic workflows

scientific article published in June 2013

Trusting Information Sources One Citizen at a Time

scientific article published in ISWC 2002

Use of semantic workflows to enhance transparency and reproducibility in clinical omics

scientific article

User interfaces with semi-formal representations

scientific article published on 10 January 2005

User studies of knowledge acquisition tools: methodology and lessons learned

scientific article published in October 2001

Using provenance in the Semantic Web

Want world domination? win at risk!: matching to-do items with how-tos from the web

scientific article published on 13 February 2011

Wings: Intelligent Workflow-Based Design of Computational Experiments

article by Yolanda Gil et al published January 2011 in IEEE Intelligent Systems

Workflow Reuse in Practice: A Study of Neuroimaging Pipeline Users

Workflow matching using semantic metadata

scientific article published in 2009