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List of works by Luigi Marchionni

A multi-omic analysis of human naïve CD4+ T cells

scientific article published on 6 November 2015

A novel role of IL-17-producing lymphocytes in mediating lytic bone disease in multiple myeloma

scientific article

A primary xenograft model of small-cell lung cancer reveals irreversible changes in gene expression imposed by culture in vitro

scientific article

A simple and reproducible breast cancer prognostic test.

scientific article

An EGFR-ERK-SOX9 signaling cascade links urothelial development and regeneration to cancer

scientific article

Analysis of differential gene expression mediated by clozapine in human postmortem brains

scientific article

Analysis of the genomic response of human prostate cancer cells to histone deacetylase inhibitors.

scientific article published on 19 July 2013

Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

scientific article (publication date: 5 December 2002)

Androgen-induced programs for prostate epithelial growth and invasion arise in embryogenesis and are reactivated in cancer.

scientific article published on 15 September 2008

Arsenic Promotes the COX2/PGE2-SOX2 Axis to Increase the Malignant Stemness Properties of Urothelial Cells.

scientific article

Association of promoter methylation of VGF and PGP9.5 with ovarian cancer progression.

scientific article

Bifunctional immune checkpoint-targeted antibody-ligand traps that simultaneously disable TGFβ enhance the efficacy of cancer immunotherapy.

scientific article published on 21 February 2018

Clear cell papillary renal cell carcinoma: micro-RNA expression profiling and comparison with clear cell renal cell carcinoma and papillary renal cell carcinoma

scientific article

Combination treatment with ABT-737 and chloroquine in preclinical models of small cell lung cancer

scientific article published on 2 March 2013

Comparative transcriptomics of primary cells in vertebrates

scientific article published on 27 July 2020

Correction: Identification and Validation of Protein Biomarkers of Response to Neoadjuvant Platinum Chemotherapy in Muscle Invasive Urothelial Carcinoma

scientific article published on 24 November 2015

Differentiation of a highly tumorigenic basal cell compartment in urothelial carcinoma.

scientific article

Digitizing omics profiles by divergence from a baseline.

scientific article published on 16 April 2018

Dimeric naphthoquinones, a novel class of compounds with prostate cancer cytotoxicity ⬇️

scientific article published on December 22, 2010

Discovery of 342 putative new genes from the analysis of 5'-end-sequenced full-length-enriched cDNA human transcripts.

scientific article

Downregulation of homologous recombination DNA repair genes by HDAC inhibition in prostate cancer is mediated through the E2F1 transcription factor

scientific article

Dysregulation of EGFR Pathway in EphA2 Cell Subpopulation Significantly Associates with Poor Prognosis in Colorectal Cancer.

scientific article published on 11 July 2016

ERK Phosphorylation Is Predictive of Resistance to IGF-1R Inhibition in Small Cell Lung Cancer ⬇️

scientific article published on March 20, 2013

Effects of age and heart failure on human cardiac stem cell function

scientific article

Expression of HIV-1 matrix protein p17 and association with B-cell lymphoma in HIV-1 transgenic mice

scientific article published on 31 October 2016

Ezrin Promotes Stem Cell Properties in Pancreatic Ductal Adenocarcinoma

scientific article published on 17 January 2019

Functional annotation of a full-length mouse cDNA collection

scientific article (publication date: 8 February 2001)

GULP1 regulates the NRF2-KEAP1 signaling axis in urothelial carcinoma

scientific article published on 18 August 2020

Gene expression profiling of advanced ovarian cancer: characterization of a molecular signature involving fibroblast growth factor 2.

scientific article published on October 2004

Germline Variants in Asporin Vary by Race, Modulate the Tumor Microenvironment, and Are Differentially Associated with Metastatic Prostate Cancer

scientific article

High levels of CD2 expression identify HIV-1 latently infected resting memory CD4+ T cells in virally suppressed subjects.

scientific article published on 12 June 2013

High-resolution microbiome profiling uncovers Fusobacterium nucleatum, Lactobacillus gasseri/johnsonii, and Lactobacillus vaginalis associated to oral and oropharyngeal cancer in saliva from HPV positive and HPV negative patients treated with surger

scientific article published on 7 September 2017

Human Th17 Cells Lack HIV-Inhibitory RNases and Are Highly Permissive to Productive HIV Infection

scientific article published on 22 June 2016

Hydrogen sulfide [corrected] increases survival during sepsis: protective effect of CHOP inhibition

scientific article published on 08 January 2014

Hypomethylation, endogenous retrovirus expression, and interferon signaling in testicular germ cell tumors

article published in the Proceedings of the National Academy of Sciences of the United States of America

Identification and Validation of Protein Biomarkers of Response to Neoadjuvant Platinum Chemotherapy in Muscle Invasive Urothelial Carcinoma

scientific article published on 31 July 2015

Identification of miR-145 targets through an integrated omics analysis.

scientific article

Identification of miR-30b-3p and miR-30d-5p as direct regulators of androgen receptor signaling in prostate cancer by complementary functional microRNA library screening

scientific article

In vivo liver regeneration potential of human induced pluripotent stem cells from diverse origins.

scientific article published in May 2011

Influenza Vaccination and COVID19 Mortality in the USA

scientific article published on 26 June 2020

Integrating diverse genomic data using gene sets

scientific article

Integration of Hedgehog and mutant FLT3 signaling in myeloid leukemia.

scientific article published on June 2015

Integrative analysis of 1q23.3 copy-number gain in metastatic urothelial carcinoma.

scientific article published on 31 January 2014

Isolation of microarray-quality RNA from primary human cells after intracellular immunostaining and fluorescence-activated cell sorting ⬇️

scientific article published on February 20, 2013

JAK3 Variant, Immune Signatures, DNA Methylation, and Social Determinants Linked to Survival Racial Disparities in Head and Neck Cancer Patients

scientific article published on 18 February 2019

Key tumor suppressor genes inactivated by "greater promoter" methylation and somatic mutations in head and neck cancer

scientific article

LNCIB human full-length cDNAs collection: towards a better comprehension of the human transcriptome

scientific article published in October 2003

MYC Is Activated by USP2a-Mediated Modulation of MicroRNAs in Prostate Cancer ⬇️

scientific article published on January 5, 2012

Methylation profiles of endometrioid and serous endometrial cancers

scientific article published on 25 June 2010

MicroRNA expression profiling of Xp11 renal cell carcinoma.

scientific article published on 11 April 2017

MicroRNA profiling in pediatric pilocytic astrocytoma reveals biologically relevant targets, including PBX3, NFIB, and METAP2.

scientific article published on 15 November 2012

MicroRNAs, promising biomarkers in the diagnosis of Xp11 translocation RCC-reply

scientific article published on 12 August 2017

Molecular effects of genistein on male urethral development.

scientific article published on 21 March 2011

Neutrophil to lymphocyte ratio (NLR) improves the risk assessment of ISS staging in newly diagnosed MM patients treated upfront with novel agents

scientific article

Newly identified members of fibroblast growth factor receptor 1 splice variants engage in crosstalk with the AXL/AKT axis in salivary adenoid cystic carcinoma

scientific article published on 06 January 2021

Next-generation sequence analysis of cancer xenograft models.

scientific article

Notch signaling activation in pediatric low-grade astrocytoma

scientific article

Only three driver gene mutations are required for the development of lung and colorectal cancers

scientific article

PDCD4 Is an Androgen-Repressed Tumor Suppressor that Regulates Prostate Cancer Growth and Castration Resistance

scientific article published on 05 December 2018

PatternMarkers & GWCoGAPS for novel data-driven biomarkers via whole transcriptome NMF.

scientific article

Plasma cells are enriched in localized prostate cancer in Black men and are associated with improved outcomes

scientific article published on 10 February 2021

Recounting the FANTOM CAGEAssociated Transcriptome

scientific article published on 20 February 2020

Regulation of lipid metabolism by Dicer revealed through SILAC mice

scientific article published on 28 February 2012

Removal of Abnormal Myofilament O-GlcNAcylation Restores Ca2+ Sensitivity in Diabetic Cardiac Muscle.

scientific article

Secreted protein, acidic and rich in cysteine-like 1 (SPARCL1) is down regulated in aggressive prostate cancers and is prognostic for poor clinical outcome

scientific article

Selective analysis of cancer-cell intrinsic transcriptional traits defines novel clinically relevant subtypes of colorectal cancer

scientific article published on 31 May 2017

Sox9 is required for prostate development and prostate cancer initiation ⬇️

scientific article published on June 1, 2012

Synthesizer: Expediting synthesis studies from context-free data with information retrieval techniques

scientific article

Targeted sequencing reveals clonal genetic changes in the progression of early lung neoplasms and paired circulating DNA

scientific article

The Notch target Hes1 directly modulates Gli1 expression and Hedgehog signaling: a potential mechanism of therapeutic resistance.

scientific article

The extracellular matrix and focal adhesion kinase signaling regulate cancer stem cell function in pancreatic ductal adenocarcinoma

scientific article published on 10 July 2017

The ordering of expression among a few genes can provide simple cancer biomarkers and signal BRCA1 mutations

scientific article published on 20 August 2009

Whole-Genome Sequencing of Salivary Gland Adenoid Cystic Carcinoma

scientific article

hGTSE-1 expression stimulates cytoplasmic localization of p53.

scientific article

switchBox: an R package for k-Top Scoring Pairs classifier development

scientific article

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