List of works by Matej Lexa

A dynamic programming algorithm for identification of triplex-forming sequences

scientific article

Contrasting patterns of transposable element and satellite distribution on sex chromosomes (XY1Y2) in the dioecious plant Rumex acetosa.

scientific article published on January 2013

Data-Mining Protein Structure by Clustering, Segmentation and Evolutionary Algorithms

article published in 2009

Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov.

scientific article

Dynamics of endogenous cytokinin pools in tobacco seedlings: a modelling approach.

scientific article published on April 2003

Guanine quadruplexes are formed by specific regions of human transposable elements

scientific article

Hammock: a hidden Markov model-based peptide clustering algorithm to identify protein-interaction consensus motifs in large datasets.

scientific article published on 5 September 2015

High-throughput analysis revealed mutations' diverging effects on SMN1 exon 7 splicing

scientific article published on 19 June 2019

Inhibitory effects of elevated endogenous cytokinins on nitrate reductase in ipt-expressing tobacco are eliminated by short-term exposure to benzyladenine

scientific article published on 01 June 2002

PRIMEX: rapid identification of oligonucleotide matches in whole genomes.

scientific article published in December 2003

Preferential binding of hot spot mutant p53 proteins to supercoiled DNA in vitro and in cells.

scientific article

Pseudomonas prosekii sp. nov., a novel psychrotrophic bacterium from Antarctica.

scientific article published on 22 June 2013

Quadruplex-forming DNA sequences spread by retrotransposons may serve as genome regulators.

scientific article published on January 2014

Quadruplex-forming sequences occupy discrete regions inside plant LTR retrotransposons

scientific article published on 7 October 2013

RAP: a new computer program for de novo identification of repeated sequences in whole genomes

scientific article published on 16 September 2004

Transposable elements and G-quadruplexes.

scientific article published on 25 September 2015

Triplex: an R/Bioconductor package for identification and visualization of potential intramolecular triplex patterns in DNA sequences.

scientific article published on 24 May 2013

Virtual PCR.

scientific article

pqsfinder: an exhaustive and imperfection-tolerant search tool for potential quadruplex-forming sequences in R.

scientific article published in November 2017

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