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List of works by Hiroki Nishida

A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left-right patterning

scientific article published on 06 February 2020

A maternal factor unique to ascidians silences the germline via binding to P-TEFb and RNAP II regulation.

scientific article

ANISEED 2015: a digital framework for the comparative developmental biology of ascidians

scientific article (publication date: 4 January 2016)

ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets.

scientific article

Actin microfilaments guide the polarized transport of nuclear pore complexes and the cytoplasmic dispersal of Vasa mRNA during GVBD in the ascidian Halocynthia roretzi.

scientific article

Ascidian embryonic development: an emerging model system for the study of cell fate specification in chordates.

scientific article published on July 2007

Ascidians and the plasticity of the chordate developmental program.

scientific article

Asymmetric and Unequal Cell Divisions in Ascidian Embryos.

scientific article published on January 2017

Autonomous muscle cell differentiation in partial ascidian embryos according to the newly verified cell lineages

scientific article published in August 1984

Biochemical evidence for membrane-bound endoderm-specific alkaline phosphatase in larvae of the ascidian, Halocynthia roretzi.

scientific article published in September 1996

Brain induction in ascidian embryos is dependent on juxtaposition of FGF9/16/20-producing and -receiving cells.

scientific article published on 11 January 2007

Cell fate polarization in ascidian mesenchyme/muscle precursors by directed FGF signaling and role for an additional ectodermal FGF antagonizing signal in notochord/nerve cord precursors

scientific article published on 14 March 2007

Cell lineage analysis in ascidian embryos by intracellular injection of a tracer enzyme. II. The 16- and 32-cell stages

scientific article published in August 1985

Cell lineages and fate maps in tunicates: conservation and modification.

scientific article published on October 2014

Conservation of peripheral nervous system formation mechanisms in divergent ascidian embryos

scientific article published on 16 November 2020

Control of Pem protein level by localized maternal factors for transcriptional regulation in the germline of the ascidian, Halocynthia roretzi.

scientific article published on 30 April 2018

Control of the number of cell division rounds in distinct tissues during ascidian embryogenesis

scientific article published on 23 May 2014

Cytoplasmic localization and reorganization in ascidian eggs: role of postplasmic/PEM RNAs in axis formation and fate determination.

scientific article published on 09 April 2012

DNA interference-mediated screening of maternal factors in the chordate Oikopleura dioica.

scientific article published on 10 March 2017

DNA interference: DNA-induced gene silencing in the appendicularian Oikopleura dioica.

scientific article

Determination and regulation in the pigment cell lineage of the ascidian embryo

scientific article (publication date: April 1989)

Development of the appendicularian Oikopleura dioica: culture, genome, and cell lineages.

scientific article published on June 2008

Developmental Roles of Nuclear Complex Factors Released during Oocyte Maturation in the Ascidians Halocynthia roretzi and Boltenia villosa ⬇️

scientific article published on February 1, 1998

Developmental fates of larval tissues after metamorphosis in ascidian Halocynthia roretzi. I. Origin of mesodermal tissues of the juvenile

scientific article published in December 1997

Developmental fates of larval tissues after metamorphosis in the ascidian, Halocynthia roretzi. II. Origin of endodermal tissues of the juvenile

scientific article published in February 2000

Developmental potential for tissue differentiation of fully dissociated cells of the ascidian embryo

scientific article published in April 1992

Direct activation by Ets and Zic is required for initial expression of the Brachyury gene in the ascidian notochord.

scientific article published on 28 March 2007

Distribution of cytoplasmic determinants in unfertilized eggs of the ascidian Halocynthia roretzi

scientific article published on 01 December 1996

Duration of competence and inducing capacity of blastomeres in notochord induction during ascidian embryogenesis

scientific article published on 01 August 1999

Eccentric position of the germinal vesicle and cortical flow during oocyte maturation specify the animal-vegetal axis of ascidian embryos

scientific article published on 7 February 2017

Ets-mediated brain induction in embryos of the ascidian Halocynthia roretzi ⬇️

scientific article published on November 15, 2003

Euro chordates: Ascidian community swims ahead. The 4th International Tunicate meeting in Villefranche sur Mer

scientific article published on 01 April 2008

Expression pattern and transcriptional control of SoxB1 in embryos of the ascidian Halocynthia roretzi

scientific article published in January 2003

FGF9/16/20 and Wnt-5alpha signals are involved in specification of secondary muscle fate in embryos of the ascidian, Halocynthia roretzi

scientific article published on 30 May 2007

Genome-wide survey of miRNAs and their evolutionary history in the ascidian, Halocynthia roretzi.

scientific article

Guidelines for the nomenclature of genetic elements in tunicate genomes

scientific article

HrNodal, the ascidian nodal-related gene, is expressed in the left side of the epidermis, and lies upstream of HrPitx

scientific article published on 4 September 2002

Induction of notochord during ascidian embryogenesis

scientific article published on 01 November 1994

Induction of trunk lateral cells, the blood cell precursors, during ascidian embryogenesis

scientific article published in January 1997

Internal and external morphology of adults of the appendicularian, Oikopleura dioica: an SEM study

scientific article published on 11 November 2016

Localization of mitochondrial large ribosomal RNA in the myoplasm of the early ascidian embryo

scientific article published in February 1999

Localized PEM mRNA and protein are involved in cleavage-plane orientation and unequal cell divisions in ascidians

scientific article published in June 2007

Long-distance cell migration during larval development in the appendicularian, Oikopleura dioica

scientific article published on 16 September 2014

Macho-1 regulates unequal cell divisions independently of its function as a muscle determinant.

scientific article published on 15 May 2010

Maternal and zygotic expression of the endoderm-specific alkaline phosphatase gene in embryos of the ascidian, Halocynthia roretzi ⬇️

scientific article published on June 15, 1998

Maternal and zygotic transcriptomes in the appendicularian, Oikopleura dioica: novel protein-encoding genes, intra-species sequence variations, and trans-spliced RNA leader.

scientific article published on 02 June 2015

Maternal mRNAs of PEM and macho 1, the ascidian muscle determinant, associate and move with a rough endoplasmic reticulum network in the egg cortex.

scientific article published in December 2003

Maternal macho-1 is an intrinsic factor that makes cell response to the same FGF signal differ between mesenchyme and notochord induction in ascidian embryos.

scientific article

Modified whole-mount in situ hybridisation and immunohistochemistry protocols without removal of the vitelline membrane in the appendicularian Oikopleura dioica

scientific article

More diversity and more convergence in tunicate biology

scientific article published in February 2010

Mouth opening is mediated by separation of dorsal and ventral daughter cells of the lip precursor cells in the larvacean, Oikopleura dioica

scientific article published on 15 August 2020

Neurula rotation determines left-right asymmetry in ascidian tadpole larvae ⬇️

scientific article published on March 7, 2012

Notch homologue from Halocynthia roretzi is preferentially expressed in the central nervous system during ascidian embryogenesis

scientific article (publication date: 17 December 1997)

Nuclear accumulation of beta-catenin and transcription of downstream genes are regulated by zygotic Wnt5alpha and maternal Dsh in ascidian embryos

scientific article published in June 2007

Nuclear plasticity and timing mechanisms of the initiation of alkaline phosphatase expression in cytoplasm-transferred blastomeres of ascidians

scientific article published in June 2001

Overlapping expression of FoxA and Zic confers responsiveness to FGF signaling to specify notochord in ascidian embryos.

scientific article published on 4 August 2006

Patterning and morphogenesis of the intricate but stereotyped oikoplastic epidermis of the appendicularian, Oikopleura dioica.

scientific article published on 8 June 2017

Patterning of an ascidian embryo along the anterior-posterior axis through spatial regulation of competence and induction ability by maternally localized PEM.

scientific article published on 3 May 2009

Plasticity of animal genome architecture unmasked by rapid evolution of a pelagic tunicate

scientific article (publication date: 3 December 2010)

Polarization of PI3K Activity Initiated by Ooplasmic Segregation Guides Nuclear Migration in the Mesendoderm.

scientific article

Polo-like kinase 1 is required for localization of Posterior End Mark protein to the centrosome-attracting body and unequal cleavages in ascidian embryos

scientific article published on 01 January 2011

REGULATOR: a database of metazoan transcription factors and maternal factors for developmental studies

scientific article

Ras is an essential component for notochord formation during ascidian embryogenesis

scientific article published on 01 November 1997

Redundant mechanisms are involved in suppression of default cell fates during embryonic mesenchyme and notochord induction in ascidians

scientific article published on 2 June 2016

Regulation of NF-kappaB/Rel by IkappaB is essential for ascidian notochord formation.

scientific article

Regulation of the number of cell division rounds by tissue-specific transcription factors and Cdk inhibitor during ascidian embryogenesis

scientific article (publication date: 2014)

Repression of zygotic gene expression in the putative germline cells in ascidian embryos

scientific article published in January 2002

Role of the FGF and MEK signaling pathway in the ascidian embryo

scientific article published on 01 October 2001

Segregation of germ layer fates by nuclear migration-dependent localization of Not mRNA.

scientific article

Simple procedure for sperm cryopreservation in the larvacean tunicate Oikopleura dioica.

scientific article

Spatial and temporal expression of two transcriptional isoforms of Lhx3, a LIM class homeobox gene, during embryogenesis of two phylogenetically remote ascidians, Halocynthia roretzi and Ciona intestinalis.

scientific article published in February 2010

Specification of developmental fates in ascidian embryos: molecular approach to maternal determinants and signaling molecules.

scientific article

Suppression of muscle fate by cellular interaction is required for mesenchyme formation during ascidian embryogenesis

scientific article published in October 1999

The BMP/CHORDIN antagonism controls sensory pigment cell specification and differentiation in the ascidian embryo.

scientific article published in August 2001

The centrosome-attracting body, microtubule system, and posterior egg cytoplasm are involved in positioning of cleavage planes in the ascidian embryo.

scientific article

The functional analysis of Type I postplasmic/PEM mRNAs in embryos of the ascidian Halocynthia roretzi.

scientific article published on 21 December 2005

The transcription factor FoxB mediates temporal loss of cellular competence for notochord induction in ascidian embryos

scientific article published on 01 June 2011

Transcription factor Tbx6 plays a central role in fate determination between mesenchyme and muscle in embryos of the ascidian, Halocynthia roretzi

scientific article published on 11 April 2014

Ultrastructural studies on the centrosome-attracting body: electron-dense matrix and its role in unequal cleavages in ascidian embryos

scientific article published on 01 October 1999

Vitelline membrane proteins promote left-sided nodal expression after neurula rotation in the ascidian, Halocynthia roretzi

scientific article published on 30 January 2019

Wavy movements of epidermis monocilia drive the neurula rotation that determines left-right asymmetry in ascidian embryos

scientific article published on 27 July 2018

Wnt evolution and function shuffling in liberal and conservative chordate genomes

scientific article published on 25 July 2018

Wnt5 is required for notochord cell intercalation in the ascidian Halocynthia roretzi.

scientific article published on 25 August 2009

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