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List of works by Hani Goodarzi

A massively parallel 3' UTR reporter assay reveals relationships between nucleotide content, sequence conservation, and mRNA destabilization

scientific article published on 31 May 2019

A neurodegeneration-specific gene-expression signature of acutely isolated microglia from an amyotrophic lateral sclerosis mouse model

scientific article

Amino acid and codon usage profiles: adaptive changes in the frequency of amino acids and codons.

scientific article published on 5 October 2007

Androgen Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men

scientific article published on 13 May 2020

Applying a neural network to predict the thermodynamic parameters for an expanded nearest-neighbor model.

scientific article published on 2 August 2005

Asparagine bioavailability governs metastasis in a model of breast cancer

scientific article published on 7 February 2018

Cancer cells exploit an orphan RNA to drive metastatic progression

Charting the "unknown unknowns" of cancer progression.

scientific article published in July 2017

Designing a neural network for the constraint optimization of the fitness functions devised based on the load minimization of the genetic code

scientific article published on 01 August 2005

Direct targeting of Sec23a by miR-200s influences cancer cell secretome and promotes metastatic colonization

scientific article

Endogenous tRNA-Derived Fragments Suppress Breast Cancer Progression via YBX1 Displacement

scientific article

FTO controls reversible m6Am RNA methylation during snRNA biogenesis

scientific article published on 18 February 2019

Fitness Landscape Transformation through a Single Amino Acid Change in the Rho Terminator ⬇️

scientific article published on May 31, 2012

Genetic dissection of an exogenously induced biofilm in laboratory and clinical isolates of E. coli

scientific article (publication date: May 2009)

Genomic Hallmarks and Structural Variation in Metastatic Prostate Cancer

Global discovery of adaptive mutations

scientific article published on 13 July 2009

HNRNPA2B1 Is a Mediator of m(6)A-Dependent Nuclear RNA Processing Events

scientific journal article

Highly variable cancer subpopulations that exhibit enhanced transcriptome variability and metastatic fitness

scientific article published on 3 May 2016

Inference of RNA decay rate from transcriptional profiling highlights the regulatory programs of Alzheimer's disease

scientific article published on 13 October 2017

Mechanosensitive pannexin-1 channels mediate microvascular metastatic cell survival.

scientific article

Metastasis-suppressor transcript destabilization through TARBP2 binding of mRNA hairpins.

scientific article published on 9 July 2014

MicroRNA-203 predicts human survival after resection of colorectal liver metastasis.

scientific article published on 07 December 2016

Modulated Expression of Specific tRNAs Drives Gene Expression and Cancer Progression.

scientific article published on June 2016

Muscleblind-like 1 suppresses breast cancer metastatic colonization and stabilizes metastasis suppressor transcripts

scientific article published on February 2016

N6-methyladenosine marks primary microRNAs for processing

scientific article

Neuronal Nsun2 deficiency produces tRNA epitranscriptomic alterations and proteomic shifts impacting synaptic signaling and behavior

scientific article published on 13 August 2021

Nuclear TARBP2 Drives Oncogenic Dysregulation of RNA Splicing and Decay

scientific article published on 09 July 2019

On the coevolution of genes and genetic code

scientific article published on 5 October 2005

On the optimality of the genetic code, with the consideration of coevolution theory by comparison of prominent cost measure matrices

scientific article published on 01 August 2005

On the optimality of the genetic code, with the consideration of termination codons

scientific article published on 01 November 2004

Onset of human preterm and term birth is related to unique inflammatory transcriptome profiles at the maternal fetal interface

scientific article published on September 2017

Optimality of codon usage in Escherichia coli due to load minimization

scientific article published in June 2005

PAPERCLIP Identifies MicroRNA Targets and a Role of CstF64/64tau in Promoting Non-canonical poly(A) Site Usage.

scientific article published on 30 March 2016

RBMS1 suppresses colon cancer metastasis through targeted stabilization of its mRNA regulon

scientific article published on 08 June 2020

Regulatory and metabolic rewiring during laboratory evolution of ethanol tolerance in E. coli.

scientific article published on June 2010

Revealing the genetic basis of natural bacterial phenotypic divergence.

scientific article published on 06 December 2013

Solvent accessibility, residue charge and residue volume, the three ingredients of a robust amino acid substitution matrix

scientific article published on 19 December 2006

Systematic discovery of structural elements governing stability of mammalian messenger RNAs ⬇️

scientific article published on April 8, 2012

Systematic identification of regulatory elements in conserved 3' UTRs of human transcripts

scientific article published on 20 March 2014

TARBP2 binding structured RNA elements drives metastasis.

scientific article published in January 2014

TMEM2 Is a SOX4-Regulated Gene That Mediates Metastatic Migration and Invasion in Breast Cancer

scientific article published on 21 June 2016

Targeting KRAS4A splicing through the RBM39/DCAF15 pathway inhibits cancer stem cells

scientific article published on 13 July 2021

The DNA methylation landscape of advanced prostate cancer

scientific article published on 13 July 2020

The LC3-conjugation machinery specifies the loading of RNA-binding proteins into extracellular vesicles

scientific article published on 13 January 2020

The RNA demethylase FTO targets m6Am in snRNA to establish distinct methyl isoforms that influence splicing

The case for an error minimizing set of coding amino acids

scientific article published on 24 September 2006

The impact of including tRNA content on the optimality of the genetic code

scientific article published in November 2005

Tumoural activation of TLR3-SLIT2 axis in endothelium drives metastasis

scientific article published on 30 September 2020

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