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List of works by Thomas Zichner

An integrated map of structural variation in 2,504 human genomes

scientific article

DELLY: structural variant discovery by integrated paired-end and split-read analysis

scientific article

Dissecting the genomic complexity underlying medulloblastoma

scientific article

Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma

scientific article

Epigenomic alterations define lethal CIMP-positive ependymomas of infancy

scientific article

Faspad: fast signaling pathway detection

scientific article published on 26 April 2007

GE-23ENHANCER HIJACKING ACTIVATES GFI1 FAMILY ONCOGENES IN MEDULLOBLASTOMA.

scientific article published in November 2014

Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations

scientific article

ICGC PedBrain - dissecting the genomic complexity underlying medulloblastoma using whole-genome sequencing.

scientific article

Identifying the Unknowns by Aligning Fragmentation Trees

scientific article

Impact of genomic structural variation in Drosophila melanogaster based on population-scale sequencing

scientific article published on 6 December 2012

Integrative genomic analyses reveal an androgen-driven somatic alteration landscape in early-onset prostate cancer

scientific article

KnowledgePearls: Provenance-Based Visualization Retrieval

scientific article published on 20 August 2018

MB-25REGULATION OF MEDULLOBLASTOMA FORMATION BY Gfi1 AND Gfi1b.

scientific article published on 21 April 2015

Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines

scientific article

Ordino: a visual cancer analysis tool for ranking and exploring genes, cell lines and tissue samples

scientific article published on 01 September 2019

PD-1 and LAG-3 Dominate Checkpoint Receptor-Mediated T-cell Inhibition in Renal Cell Carcinoma

scientific article published on 04 September 2019

PM-09REGULATION OF MEDULLOBLASTOMA FORMATION BY Gfi1 AND Gfi1B

scientific article published in November 2014

Pan-cancer analysis of somatic copy-number alterations implicates IRS4 and IGF2 in enhancer hijacking.

scientific article

Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma

scientific article

SMARCA2-deficiency confers sensitivity to targeted inhibition of SMARCA4 in esophageal squamous cell carcinoma cell lines

scientific article published on 12 August 2019

SPAG7 is a candidate gene for the periodic fever, aphthous stomatitis, pharyngitis and adenopathy (PFAPA) syndrome.

scientific article published on 23 January 2014

STRUCTURAL VARIANTS SHUFFLE CHROMATIN TO ACTIVATE GFI1 FAMILY ONCOGENES IN MEDULLOBLASTOMA.

scientific article published in July 2014

Shadow Enhancers Are Pervasive Features of Developmental Regulatory Networks

scientific article published on 9 December 2015

Spectrum and prevalence of genetic predisposition in medulloblastoma: a retrospective genetic study and prospective validation in a clinical trial cohort.

scientific article

Subgroup-specific structural variation across 1,000 medulloblastoma genomes

scientific article

Systematic inference of copy-number genotypes from personal genome sequencing data reveals extensive olfactory receptor gene content diversity

scientific article

The genomic and transcriptomic landscape of a HeLa cell line

scientific article

The whole-genome landscape of medulloblastoma subtypes

scientific article published in July 2017

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