List of works - Ben Glocker

(Hyper)-graphical models in biomedical image analysis

scientific article published on 23 June 2016

3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images

A Semi-supervised Large Margin Algorithm for White Matter Hyperintensity Segmentation

Active label cleaning for improved dataset quality under resource constraints

scientific article published on 04 March 2022

Adaptive parametrization of multivariate B-splines for image registration

Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation

scientific article published on 26 September 2017

Approximated Curvature Penalty in Non-rigid Registration Using Pairwise MRFs

Atlas Encoding by Randomized Forests for Efficient Label Propagation

scientific article published on 01 January 2013

Attention gated networks: Learning to leverage salient regions in medical images

scientific article published on 05 February 2019

Automatic Brain Localization in Fetal MRI Using Superpixel Graphs

Biomedical image analysis using Markov random fields & efficient linear programing

scientific article published in January 2009

Causality matters in medical imaging

scientific article published on 22 July 2020

Classifier-Based Multi-atlas Label Propagation with Test-Specific Atlas Weighting for Correspondence-Free Scenarios

Computing minimal deformations: application to construction of statistical shape models

Deep neural network to locate and segment brain tumors outperformed the expert technicians who created the training data

scientific article published on 01 September 2020

DeepMedic for Brain Tumor Segmentation

Deformable medical image registration: setting the state of the art with discrete methods

scientific article published on August 2011

Dense image registration through MRFs and efficient linear programming

scientific article published on 7 April 2008

Dense registration with deformation priors

scientific article published in January 2009

Discrete tracking of parametrized curves

Discriminative segmentation-based evaluation through shape dissimilarity

scientific article published on 30 August 2012

Disease prediction using graph convolutional networks: Application to Autism Spectrum Disorder and Alzheimer’s disease

scientific article published on 02 June 2018

Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation ⬇️

scientific article published on 29 October 2016

Encoding atlases by randomized classification forests for efficient multi-atlas label propagation

scientific article published on 2 July 2014

Ensemble of Convolutional Neural Networks Improves Automated Segmentation of Acute Ischemic Lesions Using Multiparametric Diffusion-Weighted MRI

scientific article published on 30 May 2019

Evaluating reinforcement learning agents for anatomical landmark detection

scientific article published on 14 February 2019

Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge

scientific article

Fast Multiple Organ Detection and Localization in Whole-Body MR Dixon Sequences

scientific article published on 01 January 2011

Geodesic Patch-Based Segmentation

scientific article published on 01 January 2014

Graphical models and deformable diffeomorphic population registration using global and local metrics

ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI.

scientific article published on 21 July 2016

Interventional tool tracking using discrete optimization

scientific article published on 10 December 2012

Is Synthesizing MRI Contrast Useful for Inter-modality Analysis?

scientific article published on 01 January 2013

Joint Classification-Regression Forests for Spatially Structured Multi-object Segmentation

Large-scale Quality Control of Cardiac Imaging in Population Studies: Application to UK Biobank

scientific article published on 12 February 2020

Learning and Combining Image Similarities for Neonatal Brain Population Studies

Learning to detect and track cells for quantitative analysis of time-lapse microscopic image sequences

Learning-Based Heart Coverage Estimation for Short-Axis Cine Cardiac MR Images

Learning-Based Quality Control for Cardiac MR Images

scientific article published on 01 November 2018

Linear image registration through MRF optimization

Linear intensity-based image registration by Markov random fields and discrete optimization

scientific article published on 29 April 2010

Markov random field optimization for intensity-based 2D-3D registration

Mediastinal atlas creation from 3-D chest computed tomography images: application to automated detection and station mapping of lymph nodes

scientific article published on 19 May 2011

Medical Image Processing for Analysis of Colon Motility

scholarly article published 2015

Modality propagation: coherent synthesis of subject-specific scans with data-driven regularization

article by Dong Hye Ye et al published 2013 in Lecture Notes in Computer Science

Motion Segmentation of Truncated Signed Distance Function Based Volumetric Surfaces

Multi-output Learning for Camera Relocalization

Multimodal surface matching with higher-order smoothness constraints

scientific article published on 31 October 2017

Needle tracking through higher-order MRF optimization

Neighbourhood approximation using randomized forests

scientific article published on 10 May 2013

Note Special Issue on Discrete Graphical Models in Biomedical Image Analysis

scientific article published in January 2016

Optical flow estimation with uncertainties through dynamic MRFs

Probabilistic Region Matching in Narrow-Band Endoscopy for Targeted Optical Biopsy

scientific article published on 01 January 2009

Quantifying progression of multiple sclerosis via classification of depth videos

Quantitative error prediction of medical image registration using regression forests

scientific article published on 11 May 2019

Real-time RGB-D camera relocalization

article published in 2013

Real-time respiratory motion tracking: roadmap correction for hepatic artery catheterizations

Regional brain morphometry in patients with traumatic brain injury based on acute- and chronic-phase magnetic resonance imaging.

scientific article published on 28 November 2017

Robust registration of longitudinal spine CT

Scene Coordinate Regression Forests for Camera Relocalization in RGB-D Images

Simultaneous Geometric - Iconic Registration

Sphere extraction in MR images with application to whole-body MRI

Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images.

scientific article published on January 2017

Supervoxel Classification Forests for Estimating Pairwise Image Correspondences

article

TeTrIS: Template Transformer Networks for Image Segmentation With Shape Priors

scientific article published on 22 March 2019

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)

scientific article

The SYNTAX score on its way out or … towards artificial intelligence: part I

scientific article published on 25 October 2019

The SYNTAX score on its way out or … towards artificial intelligence: part II

scientific article published on 25 October 2019

Towards a computer-aided diagnosis system for colon motility dysfunctions

TriangleFlow: Optical Flow with Triangulation-Based Higher-Order Likelihoods

article by Ben Glocker et al published 2010 in Lecture Notes in Computer Science

Uncertainty-Driven Forest Predictors for Vertebra Localization and Segmentation

article

Unsupervised Domain Adaptation in Brain Lesion Segmentation with Adversarial Networks

article published in 2017

Vertebrae Localization in Pathological Spine CT via Dense Classification from Sparse Annotations

scientific article published on 01 January 2013

WESD--Weighted Spectral Distance for measuring shape dissimilarity

scientific article published on September 2013

What's fair is… fair? Presenting JustEFAB, an ethical framework for operationalizing medical ethics and social justice in the integration of clinical machine learning

scientific article published on 12 June 2023

List of works by Ben Glocker

(Hyper)-graphical models in biomedical image analysis

3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images

A Semi-supervised Large Margin Algorithm for White Matter Hyperintensity Segmentation

Active label cleaning for improved dataset quality under resource constraints

Adaptive parametrization of multivariate B-splines for image registration

Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation

Approximated Curvature Penalty in Non-rigid Registration Using Pairwise MRFs

Atlas Encoding by Randomized Forests for Efficient Label Propagation

Attention gated networks: Learning to leverage salient regions in medical images

Automatic Brain Localization in Fetal MRI Using Superpixel Graphs

Biomedical image analysis using Markov random fields & efficient linear programing

Causality matters in medical imaging

Classifier-Based Multi-atlas Label Propagation with Test-Specific Atlas Weighting for Correspondence-Free Scenarios

Computing minimal deformations: application to construction of statistical shape models

Deep neural network to locate and segment brain tumors outperformed the expert technicians who created the training data

DeepMedic for Brain Tumor Segmentation

Deformable medical image registration: setting the state of the art with discrete methods

Dense image registration through MRFs and efficient linear programming

Dense registration with deformation priors

Discrete tracking of parametrized curves

Discriminative segmentation-based evaluation through shape dissimilarity

Disease prediction using graph convolutional networks: Application to Autism Spectrum Disorder and Alzheimer’s disease

Efficient multi-scale 3D CNN with fully connected CRF for accurate brain lesion segmentation ⬇️

Encoding atlases by randomized classification forests for efficient multi-atlas label propagation

Ensemble of Convolutional Neural Networks Improves Automated Segmentation of Acute Ischemic Lesions Using Multiparametric Diffusion-Weighted MRI

Evaluating reinforcement learning agents for anatomical landmark detection

Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge

Fast Multiple Organ Detection and Localization in Whole-Body MR Dixon Sequences

Geodesic Patch-Based Segmentation

Graphical models and deformable diffeomorphic population registration using global and local metrics

ISLES 2015 - A public evaluation benchmark for ischemic stroke lesion segmentation from multispectral MRI.

Interventional tool tracking using discrete optimization

Is Synthesizing MRI Contrast Useful for Inter-modality Analysis?

Joint Classification-Regression Forests for Spatially Structured Multi-object Segmentation

Large-scale Quality Control of Cardiac Imaging in Population Studies: Application to UK Biobank

Learning and Combining Image Similarities for Neonatal Brain Population Studies

Learning to detect and track cells for quantitative analysis of time-lapse microscopic image sequences

Learning-Based Heart Coverage Estimation for Short-Axis Cine Cardiac MR Images

Learning-Based Quality Control for Cardiac MR Images

Linear image registration through MRF optimization

Linear intensity-based image registration by Markov random fields and discrete optimization

Markov random field optimization for intensity-based 2D-3D registration

Mediastinal atlas creation from 3-D chest computed tomography images: application to automated detection and station mapping of lymph nodes

Medical Image Processing for Analysis of Colon Motility

Modality propagation: coherent synthesis of subject-specific scans with data-driven regularization

Motion Segmentation of Truncated Signed Distance Function Based Volumetric Surfaces

Multi-output Learning for Camera Relocalization

Multimodal surface matching with higher-order smoothness constraints

Needle tracking through higher-order MRF optimization

Neighbourhood approximation using randomized forests

Note Special Issue on Discrete Graphical Models in Biomedical Image Analysis

Optical flow estimation with uncertainties through dynamic MRFs

Probabilistic Region Matching in Narrow-Band Endoscopy for Targeted Optical Biopsy

Quantifying progression of multiple sclerosis via classification of depth videos

Quantitative error prediction of medical image registration using regression forests

Real-time RGB-D camera relocalization

Real-time respiratory motion tracking: roadmap correction for hepatic artery catheterizations

Regional brain morphometry in patients with traumatic brain injury based on acute- and chronic-phase magnetic resonance imaging.

Robust registration of longitudinal spine CT

Scene Coordinate Regression Forests for Camera Relocalization in RGB-D Images

Simultaneous Geometric - Iconic Registration

Sphere extraction in MR images with application to whole-body MRI

Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images.

Supervoxel Classification Forests for Estimating Pairwise Image Correspondences

TeTrIS: Template Transformer Networks for Image Segmentation With Shape Priors

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)

The SYNTAX score on its way out or … towards artificial intelligence: part I

The SYNTAX score on its way out or … towards artificial intelligence: part II

Towards a computer-aided diagnosis system for colon motility dysfunctions

TriangleFlow: Optical Flow with Triangulation-Based Higher-Order Likelihoods

Uncertainty-Driven Forest Predictors for Vertebra Localization and Segmentation

Unsupervised Domain Adaptation in Brain Lesion Segmentation with Adversarial Networks

Vertebrae Localization in Pathological Spine CT via Dense Classification from Sparse Annotations

WESD--Weighted Spectral Distance for measuring shape dissimilarity

What's fair is… fair? Presenting JustEFAB, an ethical framework for operationalizing medical ethics and social justice in the integration of clinical machine learning

[DEMO] Dense planar SLAM