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List of works by Jorge Ripoll

360° free space fluorescence molecular tomography using silhouette surface reconstruction

3D imaging in CUBIC-cleared mouse heart tissue: going deeper

scientific article

3D in vivo imaging of GFP-expressing T-cells in mice with non-contact fluorescence molecular tomography

3D in-vivo imaging of GFP-expressing T-cells in mice with non-contact fluorescence molecular tomography (Invited Paper)

article

3D multi-modal registration for assessing molecular activity changes in time-dependent geometries

scientific article published in January 2008

3D reconstruction of light flux distribution on arbitrary surfaces from 2D multi-photographic images

scientific article published in September 2010

A customized light sheet microscope to measure spatio-temporal protein dynamics in small model organisms

scientific article

A multiprojection noncontact fluorescence tomography setup for imaging arbitrary geometries

A new in vivo model to test anti-tuberculosis drugs using fluorescence imaging

scientific article

A new optical-CT apparatus for 3-D radiotherapy dosimetry: is free space scanning feasible?

scientific article published on 18 March 2010

A study of photon propagation in free-space based on hybrid radiosity-radiance theorem

scientific article published in August 2009

A submillimeter resolution fluorescence molecular imaging system for small animal imaging

scientific article published on 01 May 2003

Accuracy of fluorescent tomography in the presence of heterogeneities: study of the normalized Born ratio

scientific article published in October 2005

Advances in optical imaging for pharmacological studies

scientific article

Analysis of the rotational center location method in Optical Projection Tomography

scientific article published in January 2013

Antigen Availability and DOCK2-Driven Motility Govern CD4+ T Cell Interactions with Dendritic Cells In Vivo.

scientific article published on 12 June 2017

Automated motion correction for in vivo optical projection tomography.

scientific article published on 24 February 2012

Automated recovery of the center of rotation in optical projection tomography in the presence of scattering

scientific article published on 19 September 2012

Boundary conditions for light propagation in diffusive media with nonscattering regions

scientific article published in September 2000

Characterization of the reduced scattering coefficient for optically thin samples: theory and experiments

Complete-angle projection diffuse optical tomography by use of early photons

scientific article published in February 2005

Correction for specimen movement and rotation errors for in-vivo Optical Projection Tomography

scientific article published on 14 July 2010

Demonstrating Improved Multiple Transport-Mean-Free-Path Imaging Capabilities of Light Sheet Microscopy in the Quantification of Fluorescence Dynamics.

scientific article published on 23 November 2017

Derivation of the scalar radiative transfer equation from energy conservation of Maxwell’s equations in the far field ⬇️

scientific article published on August 1, 2011

Development of a three-dimensional surface imaging system for melanocytic skin lesion evaluation

scientific article published on January 2013

Diffuse optical tomography of breast with non-specific contrast agent

Diffuse photon propagation in multilayered geometries

scientific article published on 11 January 2006

Dynamic Measurement of Tumor Vascular Permeability and Perfusion using a Hybrid System for Simultaneous Magnetic Resonance and Fluorescence Imaging

scientific article published on 17 September 2015

Effect of roughness in nondiffusive regions within diffusive media

Employing in-vivo molecular imaging in simulating and validating tumor growth.

scientific article published in January 2013

Experimental determination of photon propagation in highly absorbing and scattering media

scientific article

Experimental fluorescence tomography of tissues with noncontact measurements

scientific article published in April 2004

FDOT reconstruction and setting optimization using singular value analysis with automatic thresholding

Fast analytical approximation for arbitrary geometries in diffuse optical tomography

scientific article published in April 2002

Feasibility of U-curve method to select the regularization parameter for fluorescence diffuse optical tomography in phantom and small animal studies.

scientific article published in June 2011

Feasibility study of endoscopic x-ray luminescence computed tomography: Simulation demonstration and phantom application

Fluorescence Diffusion in the Presence of Optically Clear Tissues in a Mouse Head Model

scientific article published on 29 December 2016

Fluorescence diffuse optical tomography using the split Bregman method

scientific article published on 28 October 2011

Fluorescent protein tomography scanner for small animal imaging

scientific article published in July 2005

Free-space fluorescence molecular tomography utilizing 360 degrees geometry projections

scientific article published in February 2007

Free-space propagation of diffuse light: theory and experiments

scientific article published on 2 September 2003

From Finite to Infinite Volumes: Removal of Boundaries in Diffuse Wave Imaging

scientific article published on 04 May 2006

Helical optical projection tomography

scientific article published in November 2013

Hybrid Fourier-real space method for diffuse optical tomography

scientific article

Hybrid small animal imaging system combining magnetic resonance imaging with fluorescence tomography using single photon avalanche diode detectors

scientific article

IMAGING SCATTERING MEDIA FROM A DISTANCE: THEORY AND APPLICATIONS OF NONCONTACT OPTICAL TOMOGRAPHY

Image analysis for assessing molecular activity changes in time-dependent geometries

scientific article published in July 2005

Imaging Changes in Lymphoid Organs In Vivo after Brain Ischemia with Three-Dimensional Fluorescence Molecular Tomography in Transgenic Mice Expressing Green Fluorescent Protein in T Lymphocytes

In vivo optical tomography: From diffusion to ballistic

In vivo tomographic imaging of near-infrared fluorescent probes

scientific article published on 01 April 2002

In vivocontinuous-wave optical breast imaging enhanced with Indocyanine Green

scientific article published on 01 June 2003

In-vivo optical tomography of small scattering specimens: time-lapse 3D imaging of the head eversion process in Drosophila melanogaster

scientific article

Influence of absorption and scattering on the quantification of fluorescence diffuse optical tomography using normalized data

scientific article

Investigating pharmacology in vivo using magnetic resonance and optical imaging

scientific article

Investigation of binding mechanisms of nuclear proteins using confocal scanning laser microscopy and FRAP.

scientific article

Iterative boundary method for diffuse optical tomography

scientific article

Kinetics of T-cell receptor-dependent antigen recognition determined in vivo by multi-spectral normalized epifluorescence laser scanning

scientific article published in July 2012

Kirchhoff approximation for diffusive waves ⬇️

scientific article published on October 26, 2001

Light sheet fluorescence microscopy for in situ cell interaction analysis in mouse lymph nodes

scientific article published on February 2016

Light transport in turbid media with non-scattering, low-scattering and high absorption heterogeneities based on hybrid simplified spherical harmonics with radiosity model

scientific article (publication date: 2013)

Longitudinal in vivo imaging of bone formation and resorption using fluorescence molecular tomography

scientific article

Looking and listening to light: the evolution of whole-body photonic imaging

scientific article

Looking inside the heart: a see-through view of the vascular tree

scientific article

Microscopic optical projection tomography in vivo

scientific article

Multimodal imaging of pancreatic beta cells in vivo by targeting transmembrane protein 27 (TMEM27).

scientific article published on 13 July 2012

Noise reduction in fluorescence Optical Projection Tomography

Noncontact diffuse optical tomography

Noncontact optical imaging in mice with full angular coverage and automatic surface extraction

scientific article

Noncontact optical tomography of turbid media

scientific article

Normalized transillumination of fluorescent proteins in small animals

scientific article

Optical characterization of small biopsy samples

Optical characterization of thin female breast biopsies based on the reduced scattering coefficient.

scientific article published on 18 May 2005

Optical molecular imaging

Optical spectroscopy of Nd3+-doped KGd(WO4)2 monocrystals

article published in 1997

Optimal tuning of lasing modes through collective particle resonance

Optimized CUBIC protocol for three-dimensional imaging of chicken embryos at single-cell resolution

scientific article published on 21 April 2017

Phase-Retrieved Tomography enables Mesoscopic imaging of Opaque Tumor Spheroids

scientific article published on 19 September 2017

Planar fluorescence imaging using normalized data

scientific article

Plenoptic projection fluorescence tomography

scientific article

Polarization-sensitive optical projection tomography for muscle fiber imaging

scientific article

Prehistological evaluation of benign and malignant pigmented skin lesions with optical computed tomography.

scientific article published in June 2012

Qualitative disorder measurements from backscattering spectra through an optical fiber

scientific article published on 01 October 2020

Quantitative performance characterization of three-dimensional noncontact fluorescence molecular tomography

scientific article published in February 2016

Quantitative point source photoacoustic inversion formulas for scattering and absorbing media

scientific article published on 24 March 2005

Radiotherapy dosimetry assessment with optical projection tomography

Recovery of optical parameters in multiple-layered diffusive media: theory and experiments

scientific article published on 01 April 2001

Scanning illumination-acquisition system for noncontact optical tomography

scientific article published in March 2009

Scattering integral equations for diffusive waves: detection of objects buried in diffusive media in the presence of rough interfaces

Scattering of electromagnetic waves from a body over a random rough surface

Sensitive detection of gene expression in mycobacteria under replicating and non-replicating conditions using optimized far-red reporters

scientific article

Singular-value analysis and optimization of experimental parameters in fluorescence molecular tomography

scientific article published in February 2004

Smart Toolkit for Fluorescence Tomography: Simulation, Reconstruction, and Validation

scientific article published on 11 April 2019

Source intensity profile in noncontact optical tomography.

scientific article

Spatial resolution of diffuse photon density waves

Spectroscopic detection improves multi-color quantification in fluorescence tomography

scientific article

Steady-state total diffuse reflectance with an exponential decaying source

scientific article published on July 2014

Stripe artifact elimination based on nonsubsampled contourlet transform for light sheet fluorescence microscopy

scientific article published in October 2016

Surface Reconstruction for free-space 360 degrees fluorescence molecular tomography and the effects of animal motion

scientific article published in February 2008

Technical note: a fast laser-based optical-CT scanner for three-dimensional radiation dosimetry

scientific article

The impact of stress on tumor growth: peripheral CRF mediates tumor-promoting effects of stress.

scientific article

Three-Dimensional in Vivo Imaging of Green Fluorescent Protein-Expressing T Cells in Mice with Noncontact Fluorescence Molecular Tomography

article published in 2007

Tomographic imaging with polarized light.

scientific article published in June 2012

Uniqueness in multispectral constant-wave epi-illumination imaging

scientific article published on 01 July 2016

Unleashing Optics and Optoacoustics for Developmental Biology

scientific article published on 16 September 2015

Use of Split Bregman denoising for iterative reconstruction in fluorescence diffuse optical tomography

scientific article published in July 2013

Vertically scanned laser sheet microscopy

scientific article

Visualization of antitumor treatment by means of fluorescence molecular tomography with an annexin V-Cy5.5 conjugate

scholarly article

Volumetric tomography of fluorescent proteins through small animals in vivo

scientific article

Weighted filtered backprojection for quantitative fluorescence optical projection tomography

scientific article

Would near-infrared fluorescence signals propagate through large human organs for clinical studies?

scientific article published in March 2002

Would near-infrared fluorescence signals propagate through large human organs for clinical studies?–Errata

scientific article published on 01 September 2002

pMHC affinity controls duration of CD8+ T cell-DC interactions and imprints timing of effector differentiation versus expansion

scientific article published on 31 October 2016

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