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List of works by Darío García de Viedma

A deletion hampering appropriate typing of Mycobacterium africanum.

scientific article published on 26 December 2016

A non-canonical mismatch repair pathway in prokaryotes

scientific article published on 27 January 2017

A novel method for the rapid and prospective identification of Beijing Mycobacterium tuberculosis strains by high-resolution melting analysis.

scientific article published in March 2011

A novel strategy based on genomics and specific PCR reveals how a multidrug-resistant Mycobacterium tuberculosis strain became prevalent in Equatorial Guinea 15 years after its emergence.

scientific article published on 13 October 2016

A proposal for applying molecular markers as an aid to identifying potential cases of imported tuberculosis in immigrants

Advanced survey of tuberculosis transmission in a complex socioepidemiologic scenario with a high proportion of cases in immigrants

scientific article

Analysis of Mycobacterium tuberculosis genotypes in Madrid and identification of two new families specific to Spain-related settings

scientific article

Analysis of changes in recent tuberculosis transmission patterns after a sharp increase in immigration

scientific article published on 15 November 2006

Analysis of clonal composition of Mycobacterium tuberculosis isolates in primary infections in children

scientific article published on August 2004

Analysis of mutations in streptomycin-resistant strains reveals a simple and reliable genetic marker for identification of the Mycobacterium tuberculosis Beijing genotype

scientific article

BK polyomavirus genotyping at inter- and intra-patient level in Spain.

scientific article published in August 2013

Characterization of Mycobacterium tuberculosis Beijing isolates from the Mediterranean area

scientific article

Characterization of clonal complexity in tuberculosis by mycobacterial interspersed repetitive unit-variable-number tandem repeat typing

scientific article

Characterization of microevolution events in Mycobacterium tuberculosis strains involved in recent transmission clusters

scientific article published on 21 September 2011

Clonal Complexity in Mycobacterium tuberculosis Can Hamper Diagnostic Procedures.

scientific article published on 15 February 2017

Co-infection with Drug-Susceptible and Reactivated Latent Multidrug-Resistant Mycobacterium tuberculosis.

scientific article published in November 2015

Comparison of phenotypic with genotypic procedures for confirmation of coagulase-negative Staphylococcus catheter-related bloodstream infections

scientific article published on October 2006

Comparison of real-time RT-PCR, shell vial culture, and conventional cell culture for the detection of the pandemic influenza A (H1N1) in hospitalized patients

scientific article

Complete Analysis of the Epidemiological Scenario around a SARS-CoV-2 Reinfection: Previous Infection Events and Subsequent Transmission

scientific article published on 08 September 2021

Complex clonal features in an mycobacterium tuberculosis infection in a two-year-old child

scientific article

Current knowledge and pending challenges in zoonosis caused by Mycobacterium bovis: a review.

scientific article published on December 2013

Detailed chronological analysis of microevolution events in herds infected persistently by Mycobacterium bovis.

scientific article published on 27 November 2015

Detection of Minority Variants and Mixed Infections in Mycobacterium tuberculosis by Direct Whole-Genome Sequencing on Noncultured Specimens Using a Specific-DNA Capture Strategy

scientific article published on 15 December 2021

Diagnosis of influenza in intensive care units: lower respiratory tract samples are better than nose-throat swabs.

scientific article

Diagnostic performance of Anyplex II MTB/MDR/XDR for detection of resistance to first and second line drugs in Mycobacterium tuberculosis.

scientific article published on 13 May 2017

Differences between a probable and proven BCG infection following intravesical instillations: 16 years experience in a tertiary care hospital

scientific article published on 11 April 2016

Differences in gene expression between clonal variants of Mycobacterium tuberculosis emerging as a result of microevolution.

scientific article

Differences in the robustness of clusters involving the Mycobacterium tuberculosis strains most frequently isolated from immigrant cases in Madrid.

scientific article published on 27 January 2010

Differential findings regarding molecular epidemiology of tuberculosis between two consecutive periods in the context of steady increase of immigration.

scientific article published on 8 March 2012

Dynamic and complex Mycobacterium tuberculosis microevolution unrevealed by standard genotyping.

scientific article published on 16 February 2012

Effect of potentially interfering substances on the measurement of HIV-1 viral load by the bDNA assay

article

Equatorial Guinea, a multidrug-resistant tuberculosis hotspot in Central Africa.

scientific article

Erratum to “Resistance and virulence mutations in patients with persistent infection by pandemic 2009 A/H1N1 influenza” [J. Clin. Virol. 50 (2011) 114–118]

scholarly article published in Journal of Clinical Virology

Evaluation of the inaccurate assignment of mixed infections by Mycobacterium tuberculosis as exogenous reinfection and analysis of the potential role of bacterial factors in reinfection

scientific article

Evaluation of the new advanced 15-loci MIRU-VNTR genotyping tool in Mycobacterium tuberculosis molecular epidemiology studies

scientific article

Evaluation of the upgraded amplified mycobacterium tuberculosis direct test (gen-probe) for direct detection of mycobacterium tuberculosis in respiratory and non-respiratory specimens

scientific article published on 01 September 2001

Fast and low-cost decentralized surveillance of transmission of tuberculosis based on strain-specific PCRs tailored from whole genome sequencing data: a pilot study.

scientific article

Heterogeneous antimicrobial resistance patterns in polyclonal populations of coagulase-negative staphylococci isolated from catheters.

scientific article

High-throughput multiplex MIRU-VNTR typing of Mycobacterium bovis

scientific article published on 28 March 2014

Host growth temperature and a conservative amino acid substitution in the replication protein of pPS10 influence plasmid host range.

scientific article

Humans as source of Mycobacterium tuberculosis infection in cattle, Spain.

scientific article published on December 2011

IS6110-based global phylogeny of Mycobacterium tuberculosis.

scientific article published on 4 December 2010

Identification of the Mycobacterium tuberculosis Beijing lineage in Ecuador

scientific article published on June 2017

Impact of laboratory cross-contamination on molecular epidemiology studies of tuberculosis

scientific article published on August 2006

In vitro activities of linezolid against clinical isolates of Mycobacterium tuberculosis that are susceptible or resistant to first-line antituberculous drugs

scientific article

In-Depth Characterization and Functional Analysis of Clonal Variants in a Mycobacterium tuberculosis Strain Prone to Microevolution.

scientific article

Infection of hickman catheter by Pseudomonas (formerly flavimonas) oryzihabitans traced to a synthetic bath sponge.

scientific article

Inflammatory reactions in progressive multifocal leukoencephalopathy after highly active antiretroviral therapy.

scientific article published in September 2001

Innovations in the molecular epidemiology of tuberculosis ⬇️

scientific article published on March 1, 2011

Insights into the Complexity of a Dormant <i>Mycobacterium tuberculosis</i> Cluster Once Transmission Is Resumed

scientific article published on 19 January 2022

Isolation of Mycobacterium tuberculosis strains with a silent mutation in rpoB leading to potential misassignment of resistance category

scientific article published on 11 May 2011

JC virus load in progressive multifocal leukoencephalopathy: analysis of the correlation between the viral burden in cerebrospinal fluid, patient survival, and the volume of neurological lesions

scientific article published on 24 May 2002

Mammalian target of rapamycin signal inhibitors could play a role in the treatment of BK polyomavirus nephritis in renal allograft recipients.

scientific article published on 17 May 2011

Molecular analysis of relapse vs re-infection in HIV-positive patients suffering from recurrent Clostridium difficile associated diarrhoea

article

Molecular and epidemiological population-based integrative analysis of human and animal Mycobacterium bovis infections in a low-prevalence setting

scientific article

Molecular epidemiology of Aspergillus fumigatus: an in-depth genotypic analysis of isolates involved in an outbreak of invasive aspergillosis ⬇️

scientific article

Molecular epidemiology of tuberculosis in Almeria (Spain). Factors associated with recent transmission

scientific article published on 25 February 2011

Molecular, epidemiological and infectivity characterisation of a Mycobacterium tuberculosis strain prevalent in Madrid

scientific article published on 07 September 2007

Multiple sampling and discriminatory fingerprinting reveals clonally complex and compartmentalized infections by M. bovis in cattle.

scientific article published on 13 November 2014

Mycobacterium tuberculosis Acquires Limited Genetic Diversity in Prolonged Infections, Reactivations and Transmissions Involving Multiple Hosts

scientific article published in January 2017

Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology

scientific article (publication date: 6 March 2006)

New real-time PCR able to detect in a single tube multiple rifampin resistance mutations and high-level isoniazid resistance mutations in Mycobacterium tuberculosis

scientific article

New route of importation of Mycobacterium tuberculosis Beijing genotype

scientific article published on January 2006

Nosocomial Transmission of SARS-CoV-2 Involving Vaccinated Health Care Workers

publication published on 05 January 2022

Optimized molecular resolution of cross-contamination alerts in clinical mycobacteriology laboratories

scientific article

Optimizing and accelerating the assignation of lineages in Mycobacterium tuberculosis using novel alternative single-tube assays

scientific article published in November 2017

Paying attention to the details in Mycobacterium tuberculosis: Strain-specific single-nucleotide polymorphisms and clonal variants

scientific article published on 21 October 2016

Persistent Infection by a Mycobacterium tuberculosis Strain That Was Theorized To Have Advantageous Properties, as It Was Responsible for a Massive Outbreak

scientific article

Polyclonal and compartmentalized infection by Mycobacterium tuberculosis in patients with both respiratory and extrarespiratory involvement

scientific article published on 7 February 2003

Probable long-term prevalence for a predominant Mycobacterium tuberculosis clone of a Beijing genotype in Colon, Panama

scientific article published on 13 October 2020

Prospective universal application of mycobacterial interspersed repetitive-unit-variable-number tandem-repeat genotyping to characterize Mycobacterium tuberculosis isolates for fast identification of clustered and orphan cases

scientific article published on 20 May 2009

Qualitative Analysis To Ascertain Genotypic Identity of or Differences between Mycobacterium tuberculosis Isolates in Laboratories with Limited Resources.

scientific article published on 02 October 2013

Rapid clonal analysis of recurrent tuberculosis by direct MIRU-VNTR typing on stored isolates

scientific article

Rapid detection and identification of Aspergillus from lower respiratory tract specimens by use of a combined probe-high-resolution melting analysis

scientific article

Rapid detection of toxigenic Clostridium difficile from stool samples by a nested PCR of toxin B gene

article

Rapid direct detection of multiple rifampin and isoniazid resistance mutations in Mycobacterium tuberculosis in respiratory samples by real-time PCR.

scientific article published on November 2004

Rapid identification of linezolid resistance in Enterococcus spp. based on high-resolution melting analysis

scientific article published on 28 December 2013

Re-analysis of epidemiologically linked tuberculosis cases not supported by IS6110-RFLP-based genotyping.

scientific article published on 11 June 2009

Real-time molecular epidemiology of tuberculosis by direct genotyping of smear-positive clinical specimens.

scientific article

Recurrences of multidrug-resistant tuberculosis: strains involved, within-host diversity, and fine-tuned allocation of reinfections

scientific article published on 07 January 2021

Resistance and virulence mutations in patients with persistent infection by pandemic 2009 A/H1N1 influenza

scientific article

Revealing hidden clonal complexity in Mycobacterium tuberculosis infection by qualitative and quantitative improvement of sampling.

scientific article published on 29 October 2014

SARS-CoV-2 B.1.1.7 Decline Is Not Driven by the Introduction of a More Successful Variant

publication published on 17 November 2021

Shared Mutations in Emerging SARS-CoV-2 Circulating Variants May Lead to Reverse Transcription-PCR (RT-PCR)-Based Misidentification of B.1.351 and P.1 Variants of Concern

publication published on 13 October 2021

Should lower respiratory tract secretions from intensive care patients be systematically screened for influenza virus during the influenza season?

scientific article published on 14 June 2012

Subtle genotypic changes can be observed soon after diagnosis in Mycobacterium tuberculosis infection

scientific article published on 16 May 2016

Systematic survey of clonal complexity in tuberculosis at a populational level and detailed characterization of the isolates involved.

scientific article published on 28 September 2011

The clonal composition of Mycobacterium tuberculosis in clinical specimens could be modified by culture

scientific article published in May 2010

The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: providing guidelines for Quality Assurance when working on membranes

scientific article

Transcription of repA, the gene of the initiation protein of the Pseudomonas plasmid pPS10, is autoregulated by interactions of the RepA protein at a symmetrical operator

scientific article

Transmission permeability of tuberculosis involving immigrants, revealed by a multicentre analysis of clusters

article

Tuberculosis recurrences: reinfection plays a role in a population whose clinical/epidemiological characteristics do not favor reinfection.

scientific article

Ultrafast Assessment of the Presence of a High-Risk Mycobacterium tuberculosis Strain in a Population

scientific article published on 30 December 2015

Unmasking subtle differences in the infectivity of microevolved Mycobacterium tuberculosis variants coinfecting the same patient.

scientific article published on 9 October 2013

Urgent Implementation in a Hospital Setting of a Strategy To Rule Out Secondary Cases Caused by Imported Extensively Drug-Resistant Mycobacterium tuberculosis Strains at Diagnosis.

scientific article published on 28 September 2016

Usefulness of Genotype MTBDRplus assay in acid-fast bacilli positive smear specimens in Almeria, Spain

article

Whole genome sequencing analysis of intrapatient microevolution in Mycobacterium tuberculosis: potential impact on the inference of tuberculosis transmission.

scientific article

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