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List of works by Ali Mortazavi

A core set of venom proteins is released by entomopathogenic nematodes in the genus Steinernema

scientific article published on 01 May 2019

Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps

scientific article published on 04 November 2019

Building gene regulatory networks from single-cell ATAC-seq and RNA-seq using Linked Self-Organizing Maps

article

Comparative Transcriptomics of Steinernema and Caenorhabditis Single Embryos Reveals Orthologous Gene Expression Convergence during Late Embryogenesis

scientific article published on October 2017

Coordinated Gene Expression and Chromatin Regulation during <i>Hydra</i> Head Regeneration

scientific article published in 2021

Diverse functional elements in RNA predicted transcriptome-wide by orthogonal RNA structure probing

scientific article published in 2021

Expanded encyclopaedias of DNA elements in the human and mouse genomes

scientific article published on 29 July 2020

Hybrid Assembly of the Genome of the Entomopathogenic Nematode Steinernema carpocapsae Identifies the X-Chromosome

scientific article published on 08 August 2019

Integrating ChIP-seq with other functional genomics data.

scientific article published on 20 March 2018

Intra-individual methylomics detects the impact of early-life adversity

scientific article published on 01 April 2019

Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seq

scientific article published on 07 October 2021

Multiple Mechanisms of Photoreceptor Spectral Tuning in Heliconius Butterflies

scientific article published on 01 April 2022

PyWGCNA: a Python package for weighted gene co-expression network analysis

scientific article published in 2023

Single-nucleus RNA-seq identifies divergent populations of FSHD2 myotube nuclei

scientific article published on 04 May 2020

Slug regulates the Dll4-Notch-VEGFR2 axis to control endothelial cell activation and angiogenesis

scientific article published on 26 October 2020

Systematic phenotyping and characterization of the 5xFAD mouse model of Alzheimer's disease

publication published on 15 October 2021

The genome of Peromyscus leucopus, natural host for Lyme disease and other emerging infections

scientific article published on 24 July 2019