List of works - Ludovic Gielly

6-kyr record of flood frequency and intensity in the western Mediterranean Alps – Interplay of solar and temperature forcing

scholarly article

AFLP markers reveal high clonal diversity and extreme longevity in four key arctic‐alpine species ⬇️

scientific article published on November 10, 2011

Amplification of oak DNA from ancient and modern wood

scientific article (publication date: December 1999)

Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

scientific article

Arctic Small Rodents Have Diverse Diets and Flexible Food Selection

scientific article

Authenticated DNA from ancient wood remains

scientific article (publication date: November 2006)

Break zones in the distributions of alleles and species in alpine plants

article

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

scientific article published on 10 June 2012

CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies

scientific article

Cascading effects of moth outbreaks on subarctic soil food webs

scientific article published on 23 July 2021

Clitellate worms (Annelida) in lateglacial and Holocene sedimentary DNA records from the Polar Urals and northern Norway

DNA from lake sediments reveals long-term ecosystem changes after a biological invasion. ⬇️

scientific article

DNA from soil mirrors plant taxonomic and growth form diversity

scientific article

Differential effects of soil trophic networks on microbial decomposition activity in mountain ecosystems

scientific article published in 2022

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

article

Exonuclease activity of proofreading DNA polymerases is at the origin of artifacts in molecular profiling studies

scientific article published in June 2008

Fifty thousand years of Arctic vegetation and megafaunal diet

scientific article (publication date: 6 February 2014)

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities

scientific article

Genetic introgression as a potential to widen a species' niche: insights from alpine Carex curvula

scientific article

Genetic structure of Hypochaeris uniflora (Asteraceae) suggests vicariance in the Carpathians and rapid post-glacial colonization of the Alps from an eastern Alpine refugium

Highly overlapping winter diet in two sympatric lemming species revealed by DNA metabarcoding

scientific article

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants

scientific article

Holocene floristic diversity and richness in northeast Norway revealed by sedimentary ancient DNA (sed aDNA) and pollen

Improvements of polymerase chain reaction and capillary electrophoresis single-strand conformation polymorphism methods in microbial ecology: toward a high-throughput method for microbial diversity studies in soil

scientific article

Lake sedimentary DNA accurately records 20th Century introductions of exotic conifers in Scotland ⬇️

scientific article

Landscape-scale distribution patterns of earthworms inferred from soil DNA

scholarly article by Johan Pansu et al published April 2015 in Soil Biology and Biochemistry

Long livestock farming history and human landscape shaping revealed by lake sediment DNA.

scientific article published in January 2014

Long-distance wolf recolonization of France and Switzerland inferred from non-invasive genetic sampling over a period of 10 years

article

Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago ⬇️

scientific article published on September 2015

Long-term changes in alpine pedogenetic processes: Effect of millennial agro-pastoralism activities (French-Italian Alps)

article

Metabarcoding data reveal vertical multitaxa variation in topsoil communities during the colonization of deglaciated forelands

scientific article published in 2022

Metabarcoding lake sediments: taphonomy and representation of contemporary vegetation in environmental DNA (eDNA) records

article

Metabarcoding of modern soil DNA gives a highly local vegetation signal in Svalbard tundra

Multiple maternal origins and weak phylogeographic structure in domestic goats

scientific article (publication date: 8 May 2001)

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

scientific article

Not only mosses: lemming winter diets as described by DNA metabarcoding

article

Persistence of arctic-alpine flora during 24,000 years of environmental change in the Polar Urals

scientific article published on 23 December 2019

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation.

scientific article

Post-glacial history of the dominant alpine sedge Carex curvula in the European Alpine System inferred from nuclear and chloroplast markers

scientific article published on 14 April 2008

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding

scientific article (publication date: 2007)

Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA.

scientific article

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

scientific article

Sedimentary ancient DNA from Lake Skartjørna, Svalbard: Assessing the resilience of arctic flora to Holocene climate change

article

Selection criteria for scoring amplified fragment length polymorphisms (AFLPs) positively affect the reliability of population genetic parameter estimates

scientific article published in April 2010

Shedding new light on the diet of Norwegian lemmings: DNA metabarcoding of stomach content

article by Eeva M. Soininen et al published 9 May 2013 in Polar Biology

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies.

scientific article

Sources of variation in small rodent trophic niche: new insights from DNA metabarcoding and stable isotope analysis

scientific article published on 15 May 2014

The use of chloroplast DNA to resolve plant phylogenies: noncoding versus rbcL sequences

scientific article published in September 1994

Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina

scientific article published in July 2010

Transient social–ecological dynamics reveal signals of decoupling in a highly disturbed Anthropocene landscape

Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasite Cytinus hypocistis (Cytinaceae)

scientific article

Using AFLP to resolve phylogenetic relationships in a morphologically diversified plant species complex when nuclear and chloroplast sequences fail to reveal variability.

scientific article

Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate

scientific article

List of works by Ludovic Gielly

6-kyr record of flood frequency and intensity in the western Mediterranean Alps – Interplay of solar and temperature forcing

AFLP markers reveal high clonal diversity and extreme longevity in four key arctic‐alpine species ⬇️

Amplification of oak DNA from ancient and modern wood

Analysing diet of small herbivores: the efficiency of DNA barcoding coupled with high-throughput pyrosequencing for deciphering the composition of complex plant mixtures

Arctic Small Rodents Have Diverse Diets and Flexible Food Selection

Authenticated DNA from ancient wood remains

Break zones in the distributions of alleles and species in alpine plants

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies

Cascading effects of moth outbreaks on subarctic soil food webs

Clitellate worms (Annelida) in lateglacial and Holocene sedimentary DNA records from the Polar Urals and northern Norway

DNA from lake sediments reveals long-term ecosystem changes after a biological invasion. ⬇️

DNA from soil mirrors plant taxonomic and growth form diversity

Differential effects of soil trophic networks on microbial decomposition activity in mountain ecosystems

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

Exonuclease activity of proofreading DNA polymerases is at the origin of artifacts in molecular profiling studies

Fifty thousand years of Arctic vegetation and megafaunal diet

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities

Genetic introgression as a potential to widen a species' niche: insights from alpine Carex curvula

Genetic structure of Hypochaeris uniflora (Asteraceae) suggests vicariance in the Carpathians and rapid post-glacial colonization of the Alps from an eastern Alpine refugium

Highly overlapping winter diet in two sympatric lemming species revealed by DNA metabarcoding

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants

Holocene floristic diversity and richness in northeast Norway revealed by sedimentary ancient DNA (sed aDNA) and pollen

Improvements of polymerase chain reaction and capillary electrophoresis single-strand conformation polymorphism methods in microbial ecology: toward a high-throughput method for microbial diversity studies in soil

Lake sedimentary DNA accurately records 20th Century introductions of exotic conifers in Scotland ⬇️

Landscape-scale distribution patterns of earthworms inferred from soil DNA

Long livestock farming history and human landscape shaping revealed by lake sediment DNA.

Long-distance wolf recolonization of France and Switzerland inferred from non-invasive genetic sampling over a period of 10 years

Long-lasting modification of soil fungal diversity associated with the introduction of rabbits to a remote sub-Antarctic archipelago ⬇️

Long-term changes in alpine pedogenetic processes: Effect of millennial agro-pastoralism activities (French-Italian Alps)

Metabarcoding data reveal vertical multitaxa variation in topsoil communities during the colonization of deglaciated forelands

Metabarcoding lake sediments: taphonomy and representation of contemporary vegetation in environmental DNA (eDNA) records

Metabarcoding of modern soil DNA gives a highly local vegetation signal in Svalbard tundra

Multiple maternal origins and weak phylogeographic structure in domestic goats

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

Not only mosses: lemming winter diets as described by DNA metabarcoding

Persistence of arctic-alpine flora during 24,000 years of environmental change in the Polar Urals

Plant DNA metabarcoding of lake sediments: How does it represent the contemporary vegetation.

Post-glacial history of the dominant alpine sedge Carex curvula in the European Alpine System inferred from nuclear and chloroplast markers

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding

Reconstructing long-term human impacts on plant communities: an ecological approach based on lake sediment DNA.

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

Sedimentary ancient DNA from Lake Skartjørna, Svalbard: Assessing the resilience of arctic flora to Holocene climate change

Selection criteria for scoring amplified fragment length polymorphisms (AFLPs) positively affect the reliability of population genetic parameter estimates

Shedding new light on the diet of Norwegian lemmings: DNA metabarcoding of stomach content

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies.

Sources of variation in small rodent trophic niche: new insights from DNA metabarcoding and stable isotope analysis

The use of chloroplast DNA to resolve plant phylogenies: noncoding versus rbcL sequences

Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina

Transient social–ecological dynamics reveal signals of decoupling in a highly disturbed Anthropocene landscape

Understanding the evolution of holoparasitic plants: the complete plastid genome of the holoparasite Cytinus hypocistis (Cytinaceae)

Using AFLP to resolve phylogenetic relationships in a morphologically diversified plant species complex when nuclear and chloroplast sequences fail to reveal variability.

Using next-generation sequencing for molecular reconstruction of past Arctic vegetation and climate