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List of works by François Pompanon

A dig into the past mitochondrial diversity of Corsican goats reveals the influence of secular herding practices

scientific article (publication date: 2012)

Altitudinal Zonation of Green Algae Biodiversity in the French Alps

scientific article published on 07 June 2021

An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity

scientific article published on 09 September 2019

An in silico approach for the evaluation of DNA barcodes

scientific article

Ancient goat genomes reveal mosaic domestication in the Fertile Crescent

scientific article published in Science

Are cattle, sheep, and goats endangered species?

scientific article published on 08 October 2007

CE-SSCP and CE-FLA, simple and high-throughput alternatives for fungal diversity studies

scientific article

Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan

article

Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

scientific article

Conservation genetics of cattle, sheep, and goats

scientific article published on February 2011

Convergent genomic signatures of domestication in sheep and goats

scientific article published on 6 March 2018

Corrigendum to "Evolution and taxonomy of the wild species of the genus Ovis (Mammalia, Artiodactyla, Bovidae)" [Mol. Phylogenet. Evol. 54(2) (2010) 315-326].

scientific article published on 26 November 2016

DNA barcoding for ecologists

scientific article

DNA from soil mirrors plant taxonomic and growth form diversity

scientific article

DNA metabarcoding and the cytochrome c oxidase subunit I marker: not a perfect match

scientific article

Evolution and taxonomy of the wild species of the genus Ovis (Mammalia, Artiodactyla, Bovidae).

scientific article

Evolutionary history and taxonomy of a short-horned grasshopper subfamily: the Melanoplinae (Orthoptera: Acrididae).

scientific article

Explorative Genome Scan to Detect Candidate Loci for Adaptation Along a Gradient of Altitude in the Common Frog (Rana temporaria)

article

Fifty thousand years of Arctic vegetation and megafaunal diet

scientific article (publication date: 6 February 2014)

Genetic homogeneity of North-African goats

scientific article published in PLoS ONE

Genetic homogenization of indigenous sheep breeds in Northwest Africa

scientific article published on 28 May 2019

Genotyping errors: causes, consequences and solutions

scientific article

How to track and assess genotyping errors in population genetics studies.

scientific article

Inside the Melanoplinae: new molecular evidence for the evolutionary history of the Eurasian Podismini (Orthoptera: Acrididae).

scientific article

Large-scale mitochondrial DNA analysis of the domestic goat reveals six haplogroups with high diversity

scientific article (publication date: 10 October 2007)

Mike Bruford (1963–2023)

scientific article published in 2023

New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach

scientific article

Next generation sequencing for characterizing biodiversity: promises and challenges

scientific article published on 23 January 2015

Old origin of a protective endogenous retrovirus (enJSRV) in the Ovis genus

scientific article published on 05 July 2018

Optimizing the trade-off between spatial and genetic sampling efforts in patchy populations: towards a better assessment of functional connectivity using an individual-based sampling scheme.

scientific article published on 7 October 2013

Persistence of environmental DNA in freshwater ecosystems

scientific article (publication date: 2011)

Population adaptive index: a new method to help measure intraspecific genetic diversity and prioritize populations for conservation

scientific article

Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding

scientific article (publication date: 2007)

Prospects and challenges for the conservation of farm animal genomic resources, 2015-2025

scientific article

Replication levels, false presences and the estimation of the presence/absence from eDNA metabarcoding data

scientific article

Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds

scientific article published on 28 February 2018

Skin swabbing as a new efficient DNA sampling technique in amphibians, and 14 new microsatellite markers in the alpine newt (Ichthyosaura alpestris).

scientific article published on 17 January 2012

Soil sampling and isolation of extracellular DNA from large amount of starting material suitable for metabarcoding studies.

scientific article

Speciation in the globeflower fly Chiastocheta spp. (Diptera: Anthomyiidae) in relation to host plant species, biogeography, and morphology.

scientific article published in February 2002

Species detection using environmental DNA from water samples

scientific article

The goat domestication process inferred from large-scale mitochondrial DNA analysis of wild and domestic individuals

scientific article

Towards next-generation biodiversity assessment using DNA metabarcoding

scientific article

Universal DNA-Based Methods for Assessing the Diet of Grazing Livestock and Wildlife from Feces

scientific article published on 01 July 2009

Use of amplified fragment length polymorphism (AFLP) markers in surveys of vertebrate diversity.

scientific article

VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity

publication published on 08 November 2021

Whole mitochondrial genomes unveil the impact of domestication on goat matrilineal variability

scientific article

ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis

scientific article

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