List of works - Louise Matthews

A Bayesian generalized random regression model for estimating heritability using overdispersed count data

scientific article

A centuries-long epidemic of scrapie in British sheep?

scientific article published on February 2001

A mechanistic model of developing immunity to Teladorsagia circumcincta infection in lambs.

scientific article published on 15 October 2010

A metapopulation model for highly pathogenic avian influenza: implications for compartmentalization as a control measure

scientific article

An analysis of cattle farmers' perceptions of drivers and barriers to on-farm control of Escherichia coli O157.

scientific article published on 27 November 2014

An ecological approach to assessing the epidemiology of antimicrobial resistance in animal and human populations

scientific article published on 16 November 2011

An evolutionary perspective on gastrointestinal nematodes of sheep.

scientific article published in June 2011

An explicit immunogenetic model of gastrointestinal nematode infection in sheep.

scientific article

Analysing livestock network data for infectious disease control: an argument for routine data collection in emerging economies

scientific article published on 01 July 2019

Associations between the presence of virulence determinants and the epidemiology and ecology of zoonotic Escherichia coli.

scientific article

Can parasites drive population cycles in mountain hares?

scientific article published on 20 January 2009

Canine distemper virus as a threat to wild tigers in Russia and across their range

scientific article published on July 2015

Comparative evidence for a link between Peyer's patch development and susceptibility to transmissible spongiform encephalopathies

scientific article

Comparison of three alternative methods for analysis of equine Faecal Egg Count Reduction Test data.

scientific article

Competitive suppression in mixed-clone parasite cultures

scientific article published on March 2005

Detection of Rare Antimicrobial Resistance Profiles by Active and Passive Surveillance Approaches

scientific article

Distemper, extinction, and vaccination of the Amur tiger

scientific article published on 23 November 2020

Do antibiotic residues in soils play a role in amplification and transmission of antibiotic resistant bacteria in cattle populations?

scientific article published on 11 July 2013

Dynamics of the 2001 UK Foot and Mouth Epidemic: Stochastic Dispersal in a Heterogeneous Landscape

scientific article published in Science

E. coli O157 on Scottish cattle farms: evidence of local spread and persistence using repeat cross-sectional data

scientific article

Effect of the initial dose of foot-and-mouth disease virus on the early viral dynamics within pigs

scientific article

Epidemiological implications of the contact network structure for cattle farms and the 20-80 rule

scientific article published on September 2005

Epidemiology. Foot-and-mouth disease under control in the UK.

scientific article published on May 2001

Estimating the potential impact of canine distemper virus on the Amur tiger population (Panthera tigris altaica) in Russia

scientific article

Estimation of temporal covariances in pathogen dynamics using Bayesian multivariate autoregressive models

scientific article published on 13 December 2019

Exploiting strain diversity to expose transmission heterogeneities and predict the impact of targeting supershedding

scientific article published on 27 October 2009

FAIR data pipeline: provenance-driven data management for traceable scientific workflows

scientific article published in 2022

From phenotype to genotype: a Bayesian solution.

scientific article published on 27 October 2010

Generating social network data using partially described networks: an example informing avian influenza control in the British poultry industry

scientific article

Genetic disorders and the quest for candidate genes: Hypotheses worth testing

article

Genetic dissection of MHC-associated susceptibility to Lepeophtheirus salmonis in Atlantic salmon

scientific article

Genotype-level variation in lifetime breeding success, litter size and survival of sheep in scrapie-affected flocks

scientific article

Geographic determinants of reported human Campylobacter infections in Scotland

scientific article

Geographic risk factors for inter-river dispersal of Gyrodactylus salaris in fjord systems in Norway

article

Heterogeneous shedding of Escherichia coli O157 in cattle and its implications for control

scholarly article

Identifying the seasonal origins of human campylobacteriosis.

scientific article published on 19 September 2012

Implications of within-farm transmission for network dynamics: consequences for the spread of avian influenza.

scientific article

Introduction. Cross-scale influences on epidemiological dynamics: from genes to ecosystems.

scientific article published on 21 August 2007

Metapopulation dynamics of Escherichia coli O157 in cattle: an exploratory model

scientific article published on October 2007

Modelling the epidemiology and transmission of Verocytotoxin-producing Escherichia coli serogroups O26 and O103 in two different calf cohorts

scientific article published on 15 January 2007

Modelling the epidemiology of Verocytotoxin-producing Escherichia coli serogroups in young calves

scientific article published on June 2005

Modelling the spread of scrapie in a sheep flock: evidence for increased transmission during lambing seasons

scientific article published on 23 November 2005

Multistrain models predict sequential multidrug treatment strategies to result in less antimicrobial resistance than combination treatment.

scientific article

Multitrait indices to predict worm length and number in sheep with natural, mixed predominantly Teladorsagia circumcincta infection.

scientific article published on 14 January 2015

Neighbourhood control policies and the spread of infectious diseases.

scientific article published in August 2003

On the generality of stability-complexity relationships in Lotka-Volterra ecosystems

scientific article published on 20 August 2010

Patchiness in plankton populations

Pathogenic potential to humans of bovine Escherichia coli O26, Scotland.

scientific article published in March 2012

Pharmacodynamic modelling of in vitro activity of tetracycline against a representative, naturally occurring population of porcine Escherichia coli

scientific article

Pharmacokinetic-pharmacodynamic model to evaluate intramuscular tetracycline treatment protocols to prevent antimicrobial resistance in pigs

scientific article

Population dynamics of scrapie in a sheep flock

scientific article

Population genomics and geographic dispersal in Chagas disease vectors: Landscape drivers and evidence of possible adaptation to the domestic setting

scientific article published in 2022

Predicting the public health benefit of vaccinating cattle against Escherichia coli O157

scientific article

Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes

scientific article published on 29 June 2010

Quantifying the sources of variability in equine faecal egg counts: implications for improving the utility of the method

scientific article

Reply to Kloepfer and Gern: Independent studies suggest an arms race between influenza and rhinovirus: What next?

scientific article published on 03 March 2020

Risk factors for the presence of high-level shedders of Escherichia coli O157 on Scottish farms

scientific article published on 14 March 2007

Selective forces shaping diversity in the class I region of the major histocompatibility complex in dairy cattle

scientific article published on 15 September 2011

Sequence-based prediction for vaccine strain selection and identification of antigenic variability in foot-and-mouth disease virus

scientific article

Super-shedding and the link between human infection and livestock carriage of Escherichia coli O157.

scientific article

Super-shedding cattle and the transmission dynamics of Escherichia coli O157.

scientific article published on February 2006

Support vector machine applied to predict the zoonotic potential of E. coli O157 cattle isolates

scientific article

Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004.

scientific article

The construction and analysis of epidemic trees with reference to the 2001 UK foot-and-mouth outbreak.

scientific article published in January 2003

The control of sea lice in Atlantic salmon by selective breeding

scientific article published on 19 August 2015

The distribution of the pathogenic nematode Nematodirus battus in lambs is zero-inflated

scientific article

The diversity of antimicrobial resistance is different in Salmonella Typhimurium DT104 from co-located animals and humans

scientific article published in 2012

The dynamic influence of genetic variation on the susceptibility of sheep to gastrointestinal nematode infection

scientific article published on October 2007

The genomic basis of domestic colonisation and dispersal in Chagas disease vectors

The prevalences of Salmonella Genomic Island 1 variants in human and animal Salmonella Typhimurium DT104 are distinguishable using a Bayesian approach. ⬇️

scientific article

The transfer of IgA from mucus to plasma and the implications for diagnosis and control of nematode infections.

scientific article

Top-down or bottom-up regulation of intra-host blood-stage malaria: do malaria parasites most resemble the dynamics of prey or predator?

scientific article published in February 2003

Using sequence data to identify alternative routes and risk of infection: a case-study of campylobacter in Scotland

scientific article

Virus-virus interactions impact the population dynamics of influenza and the common cold

scientific article published on 16 December 2019

Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations

scientific article published in 2022

List of works by Louise Matthews

A Bayesian generalized random regression model for estimating heritability using overdispersed count data

A centuries-long epidemic of scrapie in British sheep?

A mechanistic model of developing immunity to Teladorsagia circumcincta infection in lambs.

A metapopulation model for highly pathogenic avian influenza: implications for compartmentalization as a control measure

An analysis of cattle farmers' perceptions of drivers and barriers to on-farm control of Escherichia coli O157.

An ecological approach to assessing the epidemiology of antimicrobial resistance in animal and human populations

An evolutionary perspective on gastrointestinal nematodes of sheep.

An explicit immunogenetic model of gastrointestinal nematode infection in sheep.

Analysing livestock network data for infectious disease control: an argument for routine data collection in emerging economies

Associations between the presence of virulence determinants and the epidemiology and ecology of zoonotic Escherichia coli.

Can parasites drive population cycles in mountain hares?

Canine distemper virus as a threat to wild tigers in Russia and across their range

Comparative evidence for a link between Peyer's patch development and susceptibility to transmissible spongiform encephalopathies

Comparison of three alternative methods for analysis of equine Faecal Egg Count Reduction Test data.

Competitive suppression in mixed-clone parasite cultures

Detection of Rare Antimicrobial Resistance Profiles by Active and Passive Surveillance Approaches

Distemper, extinction, and vaccination of the Amur tiger

Do antibiotic residues in soils play a role in amplification and transmission of antibiotic resistant bacteria in cattle populations?

Dynamics of the 2001 UK Foot and Mouth Epidemic: Stochastic Dispersal in a Heterogeneous Landscape

E. coli O157 on Scottish cattle farms: evidence of local spread and persistence using repeat cross-sectional data

Effect of the initial dose of foot-and-mouth disease virus on the early viral dynamics within pigs

Epidemiological implications of the contact network structure for cattle farms and the 20-80 rule

Epidemiology. Foot-and-mouth disease under control in the UK.

Estimating the potential impact of canine distemper virus on the Amur tiger population (Panthera tigris altaica) in Russia

Estimation of temporal covariances in pathogen dynamics using Bayesian multivariate autoregressive models

Exploiting strain diversity to expose transmission heterogeneities and predict the impact of targeting supershedding

FAIR data pipeline: provenance-driven data management for traceable scientific workflows

From phenotype to genotype: a Bayesian solution.

Generating social network data using partially described networks: an example informing avian influenza control in the British poultry industry

Genetic disorders and the quest for candidate genes: Hypotheses worth testing

Genetic dissection of MHC-associated susceptibility to Lepeophtheirus salmonis in Atlantic salmon

Genotype-level variation in lifetime breeding success, litter size and survival of sheep in scrapie-affected flocks

Geographic determinants of reported human Campylobacter infections in Scotland

Geographic risk factors for inter-river dispersal of Gyrodactylus salaris in fjord systems in Norway

Heterogeneous shedding of Escherichia coli O157 in cattle and its implications for control

Identifying the seasonal origins of human campylobacteriosis.

Implications of within-farm transmission for network dynamics: consequences for the spread of avian influenza.

Introduction. Cross-scale influences on epidemiological dynamics: from genes to ecosystems.

Metapopulation dynamics of Escherichia coli O157 in cattle: an exploratory model

Modelling the epidemiology and transmission of Verocytotoxin-producing Escherichia coli serogroups O26 and O103 in two different calf cohorts

Modelling the epidemiology of Verocytotoxin-producing Escherichia coli serogroups in young calves

Modelling the spread of scrapie in a sheep flock: evidence for increased transmission during lambing seasons

Multistrain models predict sequential multidrug treatment strategies to result in less antimicrobial resistance than combination treatment.

Multitrait indices to predict worm length and number in sheep with natural, mixed predominantly Teladorsagia circumcincta infection.

Neighbourhood control policies and the spread of infectious diseases.

On the generality of stability-complexity relationships in Lotka-Volterra ecosystems

Patchiness in plankton populations

Pathogenic potential to humans of bovine Escherichia coli O26, Scotland.

Pharmacodynamic modelling of in vitro activity of tetracycline against a representative, naturally occurring population of porcine Escherichia coli

Pharmacokinetic-pharmacodynamic model to evaluate intramuscular tetracycline treatment protocols to prevent antimicrobial resistance in pigs

Population dynamics of scrapie in a sheep flock

Population genomics and geographic dispersal in Chagas disease vectors: Landscape drivers and evidence of possible adaptation to the domestic setting

Predicting the public health benefit of vaccinating cattle against Escherichia coli O157

Putative household outbreaks of campylobacteriosis typically comprise single MLST genotypes

Quantifying the sources of variability in equine faecal egg counts: implications for improving the utility of the method

Reply to Kloepfer and Gern: Independent studies suggest an arms race between influenza and rhinovirus: What next?

Risk factors for the presence of high-level shedders of Escherichia coli O157 on Scottish farms

Selective forces shaping diversity in the class I region of the major histocompatibility complex in dairy cattle

Sequence-based prediction for vaccine strain selection and identification of antigenic variability in foot-and-mouth disease virus

Super-shedding and the link between human infection and livestock carriage of Escherichia coli O157.

Super-shedding cattle and the transmission dynamics of Escherichia coli O157.

Support vector machine applied to predict the zoonotic potential of E. coli O157 cattle isolates

Temporal and spatial patterns of bovine Escherichia coli O157 prevalence and comparison of temporal changes in the patterns of phage types associated with bovine shedding and human E. coli O157 cases in Scotland between 1998-2000 and 2002-2004.

The construction and analysis of epidemic trees with reference to the 2001 UK foot-and-mouth outbreak.

The control of sea lice in Atlantic salmon by selective breeding

The distribution of the pathogenic nematode Nematodirus battus in lambs is zero-inflated

The diversity of antimicrobial resistance is different in Salmonella Typhimurium DT104 from co-located animals and humans

The dynamic influence of genetic variation on the susceptibility of sheep to gastrointestinal nematode infection

The genomic basis of domestic colonisation and dispersal in Chagas disease vectors

The prevalences of Salmonella Genomic Island 1 variants in human and animal Salmonella Typhimurium DT104 are distinguishable using a Bayesian approach. ⬇️

The transfer of IgA from mucus to plasma and the implications for diagnosis and control of nematode infections.

Top-down or bottom-up regulation of intra-host blood-stage malaria: do malaria parasites most resemble the dynamics of prey or predator?

Using sequence data to identify alternative routes and risk of infection: a case-study of campylobacter in Scotland

Virus-virus interactions impact the population dynamics of influenza and the common cold

Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations