Search filters

List of works by Nicholas M. Glykos

A fast and inexpensive procedure for drying polyacrylamide gels

scientific article published on 01 December 2000

A molecular dynamics simulation study on the propensity of Asn-Gly-containing heptapeptides towards β-turn structures: Comparison with ab initio quantum mechanical calculations

scientific article published on 03 December 2020

A stochastic approach to molecular replacement

scientific article published in February 2000

As good as it gets? Folding molecular dynamics simulations of the LytA choline-binding peptide result to an exceptionally accurate model of the peptide structure.

scientific article published on 17 February 2013

Characterizing a partially ordered miniprotein through folding molecular dynamics simulations: Comparison with the experimental data

scientific article

Crystallization and diffraction to ultrahigh resolution (0.8 A) of a designed variant of the Rop protein

scientific article published on 01 August 2000

Crystallization of type I chloramphenicol acetyltransferase: an approach based on the concept of ionic strength reducers.

scientific article

Determination of protein oligomerization state: two approaches based on glutaraldehyde crosslinking.

scientific article published on 24 October 2007

Folding Simulations of a Nuclear Receptor Box-Containing Peptide Demonstrate the Structural Persistence of the LxxLL Motif Even in the Absence of Its Cognate Receptor.

scientific article

Folding molecular dynamics simulations accurately predict the effect of mutations on the stability and structure of a vammin-derived peptide

scientific article published on 13 August 2014

Grcarma: A fully automated task-oriented interface for the analysis of molecular dynamics trajectories.

scientific article published in October 2013

Ionic strength reducers: an efficient approach to protein purification and crystallization. Application to two Rop variants.

scientific article

Loopless Rop: structure and dynamics of an engineered homotetrameric variant of the repressor of primer protein

scientific article

Low-Resolution Structural Characterization of the Arginine Repressor/Activator fromBacillus subtilis: a Combined X-ray Crystallographic and Electron Microscopical Approach ⬇️

scientific article published on March 1, 1998

Meaningful refinement of polyalanine models using rigid-body simulated annealing: application to the structure determination of the A31P Rop mutant

scientific article published on 01 July 1999

Molecular Dynamics Simulations of BcZBP, A Deacetylase from Bacillus cereus: Active Site Loops Determine Substrate Accessibility and Specificity

scientific article published on 01 December 2009

Molecular simulation of peptides coming of age: Accurate prediction of folding, dynamics and structures

scientific article published on 01 February 2019

Multidimensional molecular replacement

scientific article published on 21 September 2001

On the application of Good-Turing statistics to quantify convergence of biomolecular simulations.

scientific article published on 2 January 2014

On the application of structure-specific bulk-solvent models ⬇️

scientific article published on July 12, 2011

On the distribution of the bulk-solvent correction parameters

scientific article published in August 2000

On the foldability of tryptophan-containing tetra- and pentapeptides: an exhaustive molecular dynamics study

scientific article published in May 2013

On the presence of short-range periodicities in protein structures that are not related to established secondary structure elements

scientific article published on 24 June 2019

Order through disorder: hyper-mobile C-terminal residues stabilize the folded state of a helical peptide. a molecular dynamics study

scientific article

Pinda: a web service for detection and analysis of intraspecies gene duplication events

scientific article published on 22 June 2013

Protein flexibility and enzymatic catalysis.

scientific article published on January 2012

Reconstruction of DNA sequences using genetic algorithms and cellular automata: towards mutation prediction?

scientific article published on 25 December 2007

Sensitivity of Folding Molecular Dynamics Simulations to Even Minor Force Field Changes

scientific article published on 28 September 2016

Software news and updates. Carma: a molecular dynamics analysis program

scientific article published on 01 November 2006

Structure determination of a small protein through a 23-dimensional molecular-replacement search

scientific article (publication date: April 2003)

Structure determination through homology modelling and torsion-angle simulated annealing: application to a polysaccharide deacetylase from Bacillus cereus

scientific article

Structure of HrcQB-C, a conserved component of the bacterial type III secretion systems ⬇️

scientific article

The 11th misconception?

scientific article published on January 2011

The balance between side-chain and backbone-driven association in folding of the α-helical influenza A transmembrane peptide

scientific article published on 31 July 2020

Three force fields' views of the 3(10) helix.

scientific article published on October 2011

Unusual α-Carbon Hydroxylation of Proline Promotes Active-Site Maturation.

scientific article published on 23 March 2017

Using J-coupling constants for force field validation: application to hepta-alanine.

scientific article published on 5 December 2011

Paulina is supported by:

About Paulina

Help