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List of works by Anders Gonçalves da Silva

A phylogenomic framework for assessing the global emergence and evolution of clonal complex 398 methicillin-resistant Staphylococcus aureus.

scientific article published on 31 January 2017

A supervised statistical learning approach for accurate Legionella pneumophila source attribution during outbreaks.

scientific article

Comprehensive antibiotic-linked mutation assessment by resistance mutation sequencing (RM-seq)

scientific article published on 31 August 2018

Convergent Evolution Driven by Rifampin Exacerbates the Global Burden of Drug-Resistant Staphylococcus aureus.

scientific article published on 24 January 2018

Discovery of Streptococcus pneumoniae serogroup 35 variants in Australian patients.

scientific article published on 3 January 2017

Establishing the evolutionary compatibility of potential sources of colonizers for overfished stocks: a population genomics approach.

scientific article published on February 2015

Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package

scientific article published in 2022

Gene flow networks among American Aedes aegypti populations

scientific article (publication date: November 2012)

Genetic Approaches Refine Ex Situ Lowland Tapir (Tapirus terrestris) Conservation

scientific article published on 19 May 2010

Genetic evidence for high propagule pressure and long-distance dispersal in monk parakeet (Myiopsitta monachus) invasive populations

scientific article published on 26 July 2010

Genomic Insights into a Sustained National Outbreak of Yersinia pseudotuberculosis.

scientific article

Genomic analysis of ST88 community-acquired methicillin resistant Staphylococcus aureus in Ghana

scientific article published on 28 February 2017

Genomic analysis of multi-resistant associated with neonatal sepsis

scientific article published on 24 October 2018

Genomic epidemiology and antimicrobial resistance of Neisseria gonorrhoeae in New Zealand.

scientific article published on 22 November 2017

Genomic exploration of sequential clinical isolates reveals a distinctive molecular signature of persistent Staphylococcus aureus bacteraemia

scientific article published on 23 August 2018

Genomics for Molecular Epidemiology and Detecting Transmission of Carbapenemase-Producing Enterobacterales in Victoria, Australia, 2012 to 2016

scientific article published on 26 August 2019

Global spread of three multidrug-resistant lineages of Staphylococcus epidermidis

scientific article published on 03 September 2018

Increasing tolerance of hospital Enterococcus faecium to handwash alcohols

scientific article published on 01 August 2018

Kinship and social behavior of lowland tapirs (Tapirus terrestris) in a central Amazon landscape

scientific article

Mining the Methylome Reveals Extensive Diversity in Staphylococcus epidermidis Restriction Modification

scientific article published on 17 December 2019

Modeling the eradication of invasive mammals using the sterile male technique

NGMASTER:in silico multi-antigen sequence typing for Neisseria gonorrhoeae.

scientific article published on 25 August 2016

On tapir ecology, evolution and conservation: what we know and future perspectives-part I.

scientific article published in December 2012

On tapir ecology, evolution and conservation: what we know and future perspectives-part II.

scientific article published in March 2013

Population history, phylogeography, and conservation genetics of the last Neotropical mega-herbivore, the lowland tapir (Tapirus terrestris) ⬇️

scientific article (publication date: 14 September 2010)

Reconstruction of the Genomes of Drug-Resistant Pathogens for Outbreak Investigation through Metagenomic Sequencing

scientific article published on 16 January 2019

Remodelling of pSK1 Family Plasmids and Enhanced Chlorhexidine Tolerance in a Dominant Hospital Lineage of Methicillin-Resistant Staphylococcus aureus

scientific article published on 25 April 2019

SNP discovery in nonmodel organisms: strand bias and base-substitution errors reduce conversion rates.

scientific article published on 23 November 2014

Scope for genetic rescue of an endangered subspecies though re-establishing natural gene flow with another subspecies.

scientific article published on 28 January 2016

Shared genetic diversity across the global invasive range of the monk parakeet suggests a common restricted geographic origin and the possibility of convergent selection

scientific article published on 15 April 2015

Target-Specific Assay for Rapid and Quantitative Detection of Mycobacterium chimaera DNA.

scientific article published on 5 April 2017

The changing landscape of vancomycin-resistant Enterococcus faecium in Australia: a population-level genomic study

article

Topical Antibiotic Use Coselects for the Carriage of Mobile Genetic Elements Conferring Resistance to Unrelated Antimicrobials in Staphylococcus aureus.

scientific article

Tracking the COVID-19 pandemic in Australia using genomics

scientific article published on 01 September 2020

Translating genomics into practice for real-time surveillance and response to carbapenemase-producing Enterobacteriaceae: evidence from a complex multi-institutional KPC outbreak.

scientific article published on 3 January 2018

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