List of works - Rabie Saidi

A novel approach for mining representative spatial motifs of proteins

Annotation of biologically relevant ligands in UniProtKB using ChEBI

scientific article published on 9 December 2022

Biological Sequences Encoding for Supervised Classification

CROssBAR: Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations

scientific article published on 15 September 2020

CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations

scientific article published on 01 September 2021

Comparing graph-based representations of protein for mining purposes

Effect of Sequence Padding on the Performance of Protein-Based Deep Learning Models

scientific article published on 20 January 2020

Effect of sequence padding on the performance of deep learning models in archaeal protein functional prediction

scientific article published on 03 September 2020

Efficiently Mining Recurrent Substructures from Protein Three-Dimensional Structure Graphs

scientific article published on 05 December 2018

Feature extraction in protein sequences classification

Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants.

scientific article published on 3 November 2017

Mining Undominated Association Rules Through Interestingness Measures

Perspectives on tracking data reuse across biodata resources

Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining

scientific article

Protein sequences classification by means of feature extraction with substitution matrices.

scientific article

Rule Mining Techniques to Predict Prokaryotic Metabolic Pathways.

scientific article published on January 2017

Smoothing 3D protein structure motifs through graph mining and amino acid similarities.

scientific article

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

scientific article published on 19 November 2019

Tools and data services registry: a community effort to document bioinformatics resources

scientific article

UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB

scientific article published on 07 March 2016

UniProt: the Universal Protein Knowledgebase in 2023

scientific article published on 21 November 2022

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase

scientific article published on 12 May 2020

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase

scientific article published in December 2020

List of works by Rabie Saidi

A novel approach for mining representative spatial motifs of proteins

Annotation of biologically relevant ligands in UniProtKB using ChEBI

Biological Sequences Encoding for Supervised Classification

CROssBAR: Comprehensive Resource of Biomedical Relations with Deep Learning Applications and Knowledge Graph Representations

CROssBAR: comprehensive resource of biomedical relations with knowledge graph representations

Comparing graph-based representations of protein for mining purposes

Effect of Sequence Padding on the Performance of Protein-Based Deep Learning Models

Effect of sequence padding on the performance of deep learning models in archaeal protein functional prediction

Efficiently Mining Recurrent Substructures from Protein Three-Dimensional Structure Graphs

Feature extraction in protein sequences classification

Large-scale automated function prediction of protein sequences and an experimental case study validation on PTEN transcript variants.

Mining Undominated Association Rules Through Interestingness Measures

Perspectives on tracking data reuse across biodata resources

Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining

Protein sequences classification by means of feature extraction with substitution matrices.

Rule Mining Techniques to Predict Prokaryotic Metabolic Pathways.

Smoothing 3D protein structure motifs through graph mining and amino acid similarities.

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Tools and data services registry: a community effort to document bioinformatics resources

UniProt-DAAC: domain architecture alignment and classification, a new method for automatic functional annotation in UniProtKB

UniProt: the Universal Protein Knowledgebase in 2023

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase

UniRule: a unified rule resource for automatic annotation in the UniProt Knowledgebase