List of works - Jacob de Vlieg

A family-based approach reveals the function of residues in the nuclear receptor ligand-binding domain

scientific article published in August 2004

A flexible approach to induced fit docking

scientific article

A molecular informatics view on best practice in multi-parameter compound optimization

scientific article published on 13 May 2011

A prospective cross-screening study on G-protein-coupled receptors: lessons learned in virtual compound library design

scientific article

Benchmarking ortholog identification methods using functional genomics data

scientific article

Computational design, synthesis, and evaluation of miniproteins as androgen receptor coactivator mimics

scientific article published on 17 August 2009

Data-driven medicinal chemistry in the era of big data

scientific article

Extraction of useful bioisostere replacments from the PDB.

scientific article published on 19 April 2011

Fleksy: a flexible approach to induced fit docking.

scientific article published on 4 May 2010

GPCRDB: information system for G protein-coupled receptors

scientific article

Integrating gene expression and GO classification for PCA by preclustering

scientific article

Org 214007-0: a novel non-steroidal selective glucocorticoid receptor modulator with full anti-inflammatory properties and improved therapeutic index

scientific article

Pharmacophore Fingerprint-Based Approach to Binding Site Subpocket Similarity and Its Application to Bioisostere Replacement ⬇️

scientific article published on August 16, 2012

PhyloPat: phylogenetic pattern analysis of eukaryotic genes

scientific article

Revisiting the Rule of Five on the Basis of Pharmacokinetic Data from Rat ⬇️

scientific article published on September 20, 2011

Structural Basis for Agonism and Antagonism for a Set of Chemically Related Progesterone Receptor Modulators

scientific article

Testing statistical significance scores of sequence comparison methods with structure similarity

scientific article published on 12 October 2006

X-ray Structures of Progesterone Receptor Ligand Binding Domain in Its Agonist State Reveal Differing Mechanisms for Mixed Profiles of 11 -Substituted Steroids

scientific article

List of works by Jacob de Vlieg

A family-based approach reveals the function of residues in the nuclear receptor ligand-binding domain

A flexible approach to induced fit docking

A molecular informatics view on best practice in multi-parameter compound optimization

A prospective cross-screening study on G-protein-coupled receptors: lessons learned in virtual compound library design

Benchmarking ortholog identification methods using functional genomics data

Computational design, synthesis, and evaluation of miniproteins as androgen receptor coactivator mimics

Data-driven medicinal chemistry in the era of big data

Extraction of useful bioisostere replacments from the PDB.

Fleksy: a flexible approach to induced fit docking.

GPCRDB: information system for G protein-coupled receptors

Integrating gene expression and GO classification for PCA by preclustering

Org 214007-0: a novel non-steroidal selective glucocorticoid receptor modulator with full anti-inflammatory properties and improved therapeutic index

Pharmacophore Fingerprint-Based Approach to Binding Site Subpocket Similarity and Its Application to Bioisostere Replacement ⬇️

PhyloPat: phylogenetic pattern analysis of eukaryotic genes

Revisiting the Rule of Five on the Basis of Pharmacokinetic Data from Rat ⬇️

Structural Basis for Agonism and Antagonism for a Set of Chemically Related Progesterone Receptor Modulators

Testing statistical significance scores of sequence comparison methods with structure similarity

X-ray Structures of Progesterone Receptor Ligand Binding Domain in Its Agonist State Reveal Differing Mechanisms for Mixed Profiles of 11 -Substituted Steroids