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List of works by Peter Golyshin

'ARMAN' archaea depend on association with euryarchaeal host in culture and in situ.

scientific article

A Mesocosm Study of the Changes in Marine Flagellate and Ciliate Communities in a Crude Oil Bioremediation Trial

scientific article published on 15 April 2010

A novel platelet-activating factor acetylhydrolase discovered in a metagenome from the earthworm-associated microbial community.

scientific article

A purple acidophilic di-ferric DNA ligase from Ferroplasma

scholarly article

A putative lichenysin A synthetase operon in Bacillus licheniformis: initial characterization.

scientific article

Acidiplasma aeolicum gen. nov., sp. nov., a euryarchaeon of the family Ferroplasmaceae isolated from a hydrothermal pool, and transfer of Ferroplasma cupricumulans to Acidiplasma cupricumulans comb. nov.

scientific article published on 23 July 2009

Activity screening of environmental metagenomic libraries reveals novel carboxylesterase families

scientific article

Alcalilimnicola halodurans gen. nov., sp. nov., an alkaliphilic, moderately halophilic and extremely halotolerant bacterium, isolated from sediments of soda-depositing Lake Natron, East Africa Rift Valley ⬇️

scientific article published on November 1, 2001

Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium. ⬇️

scientific article

Alcanivorax borkumensis produces an extracellular siderophore in iron-limitation condition maintaining the hydrocarbon-degradation efficiency.

scientific article

Analysis of defence systems and a conjugative IncP-1 plasmid in the marine polyaromatic hydrocarbons-degrading bacterium Cycloclasticus sp. 78-ME.

scientific article published on 3 May 2016

Analysis of storage lipid accumulation in Alcanivorax borkumensis: Evidence for alternative triacylglycerol biosynthesis routes in bacteria

scientific article published on 22 November 2006

Archaea dominate the microbial community in an ecosystem with low-to-moderate temperature and extreme acidity

scientific article published on 28 January 2019

Bacterial consortium proteomics under 4-chlorosalicylate carbon-limiting conditions.

scientific article

Bacterial population and biodegradation potential in chronically crude oil-contaminated marine sediments are strongly linked to temperature

scientific article published on 29 June 2015

Biochemical and Structural Insights into Enzymatic Depolymerization of Polylactic Acid and Other Polyesters by Microbial Carboxylesterases.

scientific article

Biochemical and structural features of a novel cyclodextrinase from cow rumen metagenome.

scientific article published on February 2007

Biology of archaea from a novel family Cuniculiplasmataceae (Thermoplasmata) ubiquitous in hyperacidic environments.

scientific article published on 14 December 2016

Bioprospecting reveals class III ω-transaminases converting bulky ketones and environmentally relevant polyamines

scientific article published on 09 January 2019

Bioreduction of sheep carcasses effectively contains and reduces pathogen levels under operational and simulated breakdown conditions.

scientific article published on 02 May 2013

Bioremediation of Southern Mediterranean oil polluted sites comes of age.

scientific article

Buwchitin: A Ruminal Peptide with Antimicrobial Potential against Enterococcus faecalis.

scientific article

Catalytic role of conserved HQGE motif in the CE6 carbohydrate esterase family

scientific article published on 04 September 2007

Chaperonins govern growth of Escherichia coli at low temperatures.

scientific article

Characterization and role of a metalloprotease induced by chitin in Serratia sp. KCK

scientific article published on 01 August 2007

Characterization of a chitinolytic enzyme from Serratia sp. KCK isolated from kimchi juice.

scientific article published on 3 April 2007

Chemical biotechnology: what's new, what's next?

scientific article published on 02 November 2005

Cloning of the gene for extracellular Bacillus circulans RNAase

scientific article

ComA-dependent transcriptional activation of lichenysin A synthetase promoter in Bacillus subtilis cells.

scientific article published on November 1997

Combined Whole-Cell High-Throughput Functional Screening for Identification of New Nicotinamidases/Pyrazinamidases in Metagenomic/Polygenomic Libraries

scientific article (publication date: 2016)

Composition and dynamics of biostimulated indigenous oil-degrading microbial consortia from the Irish, North and Mediterranean Seas: a mesocosm study

scientific article published on 23 April 2012

Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads.

scientific article published on 29 April 2015

Conversion of a carboxylesterase into a triacylglycerol lipase by a random mutation

scientific article published on 01 November 2005

Crude oil-induced structural shift of coastal bacterial communities of rod bay (Terra Nova Bay, Ross Sea, Antarctica) and characterization of cultured cold-adapted hydrocarbonoclastic bacteria

scientific article

Cuniculiplasmataceae, their ecogenomic and metabolic patterns, and interactions with 'ARMAN'

scientific article published on 29 November 2018

Decoding the ocean's microbiological secrets for marine enzyme biodiscovery

scientific article published on 01 January 2019

Degradation Network Reconstruction in Uric Acid and Ammonium Amendments in Oil-Degrading Marine Microcosms Guided by Metagenomic Data

scientific article published on 24 November 2015

Degradation of Hydrocarbons and Heavy Metal Reduction by Marine Bacteria in Highly Contaminated Sediments

scientific article published on 11 September 2020

Determinants and Prediction of Esterase Substrate Promiscuity Patterns.

scientific article published on 28 November 2017

Differential Protein Expression During Growth on Medium Versus Long-Chain Alkanes in the Obligate Marine Hydrocarbon-Degrading Bacterium MIL-1

scientific article published on 17 December 2018

Discovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats

scientific article

Discovery of extremely halophilic, methyl-reducing euryarchaea provides insights into the evolutionary origin of methanogenesis

scientific article

Dissimilatory sulfate reduction in the archaeon 'Candidatus Vulcanisaeta moutnovskia' sheds light on the evolution of sulfur metabolism

scientific article published on 17 August 2020

Diversity of "Ca. Micrarchaeota" in Two Distinct Types of Acidic Environments and Their Associations with Thermoplasmatales

scientific article published on 15 June 2019

Diversity of facultatively anaerobic microscopic mycelial fungi in soils

scientific article

Diversity of hydrolases from hydrothermal vent sediments of the Levante Bay, Vulcano Island (Aeolian archipelago) identified by activity-based metagenomics and biochemical characterization of new esterases and an arabinopyranosidase

scientific article

Draft Genome Sequence of Monaibacterium marinum C7T, Isolated from Seawater from the Menai Straits, Wales, United Kingdom

scientific article published in February 2018

Effect of novel biosurfactants on biodegradation of polychlorinated biphenyls by pure and mixed bacterial cultures.

scientific article

Effect of the earthworms Lumbricus terrestris and Aporrectodea caliginosa on bacterial diversity in soil

scientific article

Effective bioremediation strategy for rapid in situ cleanup of anoxic marine sediments in mesocosm oil spill simulation.

scientific article

Elemental sulfur and acetate can support life of a novel strictly anaerobic haloarchaeon

scientific article published on 15 May 2015

Enzyme adaptation to habitat thermal legacy shapes the thermal plasticity of marine microbiomes

Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends

scientific article (publication date: 2016)

Expression of a temperature-sensitive esterase in a novel chaperone-based Escherichia coli strain

scientific article

Fate of pathogens in a simulated bioreduction system for livestock carcasses.

scientific article

Ferrous iron- and ammonium-rich diffuse vents support habitat-specific communities in a shallow hydrothermal field off the Basiluzzo Islet (Aeolian Volcanic Archipelago).

scientific article published on 6 April 2017

Functional Screening of Hydrolytic Activities Reveals an Extremely Thermostable Cellulase from a Deep-Sea Archaeon

scientific article published on July 2015

Functional consequences of single:double ring transitions in chaperonins: life in the cold

scientific article published in July 2004

Functional metagenomics unveils a multifunctional glycosyl hydrolase from the family 43 catalysing the breakdown of plant polymers in the calf rumen.

scientific article

Gene sets for utilization of primary and secondary nutrition supplies in the distal gut of endangered Iberian lynx

scientific article published in 2012

Genome Sequence of Thalassolituus oleivorans MIL-1 (DSM 14913 T ) ⬇️

scientific article published on April 18, 2013

Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

scientific article

Genome sequence completed of Alcanivorax borkumensis, a hydrocarbon-degrading bacterium that plays a global role in oil removal from marine systems.

scientific article published on December 2003

Genome sequence of obligate marine polycyclic aromatic hydrocarbons-degrading bacterium Cycloclasticus sp. 78-ME, isolated from petroleum deposits of the sunken tanker Amoco Milford Haven, Mediterranean Sea

scientific article published on 24 October 2015

Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis

scientific article

Halorhabdus tiamatea: proteogenomics and glycosidase activity measurements identify the first cultivated euryarchaeon from a deep-sea anoxic brine lake as potential polysaccharide degrader

scientific article

Heterotrophic bicarbonate assimilation is the main process of de novo organic carbon synthesis in hadal zone of the Hellenic Trench, the deepest part of Mediterranean Sea.

scientific article published in December 2014

Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp Rimicaris exoculata by using functional metagenomics

scientific article

Insights into the degradation capacities of Amycolatopsis tucumanensis DSM 45259 guided by microarray data.

scientific article

Inter‐conversion of catalytic abilities in a bifunctional carboxyl/feruloyl‐esterase from earthworm gut metagenome ⬇️

scientific article published on July 17, 2009

Isolation and characterization of novel lipases/esterases from a bovine rumen metagenome

scientific article published on 11 January 2015

Limits of life in MgCl2-containing environments: chaotropicity defines the window.

scientific article published in March 2007

Low temperature-induced systems failure in Escherichia coli: insights from rescue by cold-adapted chaperones

scientific article published in January 2006

Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT.

scientific article

Metagenomic analysis of hadopelagic microbial assemblages thriving at the deepest part of Mediterranean Sea, Matapan-Vavilov Deep

scientific article

Metagenomics approaches in systems microbiology

scientific article

Metagenomics as a Tool for Enzyme Discovery: Hydrolytic Enzymes from Marine-Related Metagenomes

scientific article published in January 2015

Metagenomics for mining new genetic resources of microbial communities

scientific article

Metaproteomics and metabolomics analyses of chronically petroleum-polluted sites reveal the importance of general anaerobic processes uncoupled with degradation

scientific article published on 23 July 2015

Methylorosula polaris gen. nov., sp. nov., an aerobic, facultatively methylotrophic psychrotolerant bacterium from tundra wetland soil ⬇️

scientific article published on May 6, 2011

Microbial Communities of Polymetallic Deposits' Acidic Ecosystems of Continental Climatic Zone With High Temperature Contrasts

scientific article published on 17 July 2019

Microbial community of a hydrothermal mud vent underneath the deep-sea anoxic brine lake Urania (eastern Mediterranean).

scientific article published on 29 November 2006

Microbial community of the deep-sea brine Lake Kryos seawater-brine interface is active below the chaotropicity limit of life as revealed by recovery of mRNA.

scientific article published on 26 January 2015

Microbial consortia in mesocosm bioremediation trial using oil sorbents, slow-release fertilizer and bioaugmentation

scientific article published in August 2009

Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin

scientific article published in August 2005

Microbial life in the Lake Medee, the largest deep-sea salt-saturated formation.

scientific article

Microbial uptake kinetics of dissolved organic carbon (DOC) compound groups from river water and sediments

scientific article published on 02 August 2019

Microbial use of low molecular weight DOM in filtered and unfiltered freshwater: Role of ultra-small microorganisms and implications for water quality monitoring.

scientific article published on 24 April 2017

Microbial β-glucosidases from cow rumen metagenome enhance the saccharification of lignocellulose in combination with commercial cellulase cocktail ⬇️

scientific article published on September 21, 2012

Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline.

scientific article published on 13 October 2017

Mining enzymes from extreme environments.

scientific article published on 4 June 2007

Mining genomes and 'metagenomes' for novel catalysts

scientific article published on 19 September 2005

Monaibacterium marinum, gen. nov, sp. nov, a new member of the Alphaproteobacteria isolated from seawater of Menai Straits, Wales, UK.

scientific article

Mutation in a "tesB-like" hydroxyacyl-coenzyme A-specific thioesterase gene causes hyperproduction of extracellular polyhydroxyalkanoates by Alcanivorax borkumensis SK2

scientific article

Nano-Sized and Filterable Bacteria and Archaea: Biodiversity and Function

scientific article published on 21 August 2018

Nanohaloarchaea as beneficiaries of xylan degradation by haloarchaea

scientific article published in 2023

Natural microbial diversity in superficial sediments of Milazzo Harbor (Sicily) and community successions during microcosm enrichment with various hydrocarbons.

scientific article published in September 2005

New tools for elucidating the ecology of micro-organisms in aquatic environments

scientific article published in December 2003

Niche-specificity factors of a marine oil-degrading bacterium Alcanivorax borkumensis SK2

scientific article published on 28 June 2008

Novel hybrid esterase-haloacid dehalogenase enzyme

scientific article published on 01 September 2010

Novel hydrolase diversity retrieved from a metagenome library of bovine rumen microflora.

scientific article published in December 2005

Novel polyphenol oxidase mined from a metagenome expression library of bovine rumen: biochemical properties, structural analysis, and phylogenetic relationships.

scientific article

Nutrient enrichment induces a shift in dissolved organic carbon (DOC) metabolism in oligotrophic freshwater sediments

scientific article published on 04 July 2019

Obligate oil-degrading marine bacteria

scientific article

Oleispira antarctica gen. nov., sp. nov., a novel hydrocarbonoclastic marine bacterium isolated from Antarctic coastal sea water

scientific article

Polychlorinated biphenyl-degrading microbial communities in soils and sediments

scientific article

Populations of heavy fuel oil-degrading marine microbial community in presence of oil sorbent materials

scientific article published in August 2009

Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats

scientific article

Primary producing prokaryotic communities of brine, interface and seawater above the halocline of deep anoxic lake L'Atalante, Eastern Mediterranean Sea.

scientific article

Protein expression in the obligate hydrocarbon-degrading psychrophile Oleispira antarctica RB-8 during alkane degradation and cold tolerance

scientific article published on 23 February 2020

Proteogenomic Analysis of BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean

scientific article published on 21 December 2018

Rational Engineering of Multiple Active Sites in an Ester Hydrolase.

scientific article

Reaction of microorganisms to the digestive fluid of the earthworms

scientific article published in January 2007

Recent trends in industrial microbiology

scientific article

Recombinant acylheptapeptide lichenysin: high level of production by Bacillus subtilis cells

scientific article published on 01 April 2000

Reply to 'Evolutionary placement of Methanonatronarchaeia'

scientific article published on 01 April 2019

Screening and characterization of novel polyesterases from environmental metagenomes with high hydrolytic activity against synthetic polyesters

article

Screening metagenomic libraries for laccase activities.

scientific article

Sea-Ice Bacteria <i>Halomonas</i> sp. Strain 363 and <i>Paracoccus</i> sp. Strain 392 Produce Multiple Types of Poly-3-Hydroxyalkaonoic Acid (PHA) Storage Polymers at Low Temperature

scientific article published on 11 August 2021

Shotgun Metagenomic Sequencing Analysis of Soft-Rot Enterobacteriaceae in Polymicrobial Communities.

scientific article published in January 2017

Single residues dictate the co-evolution of dual esterases: MCP hydrolases from the α/β hydrolase family

scientific article

Stratified prokaryote network in the oxic-anoxic transition of a deep-sea halocline.

scientific article published in March 2006

Structural and functional characterization of a ruminal β-glycosidase defines a novel subfamily of glycosyl hydrolase family 3 with permuted domain topology

scientific article

Structural characterization of lichenysin A components by fast atom bombardment tandem mass spectrometry

scientific article published on 01 May 1999

Structure and activity of the cold-active and anion-activated carboxyl esterase OLEI01171 from the oil-degrading marine bacterium Oleispira antarctica

scientific article

Structure and evolutionary trace-assisted screening of a residue swapping the substrate ambiguity and chiral specificity in an esterase

scientific article published on 18 April 2021

Subtle shifts in microbial communities occur alongside the release of carbon induced by drought and rewetting in contrasting peatland ecosystems.

scientific article published on 12 September 2017

Sulfur Respiration in a Group of Facultatively Anaerobic Natronoarchaea Ubiquitous in Hypersaline Soda Lakes

article

Symbiosis between nanohaloarchaeon and haloarchaeon is based on utilization of different polysaccharides

scientific article published on 05 August 2020

Systems approaches to microbial communities and their functioning.

scientific article published on 14 July 2010

Thalassolituus oleivorans gen. nov., sp. nov., a novel marine bacterium that obligately utilizes hydrocarbons.

scientific article

The 'pH optimum anomaly' of intracellular enzymes of Ferroplasma acidiphilum.

scientific article

The aerobic dechlorination activities of two bacterial species isolated from a refuse dumpsite in Nigeria

scientific article published in March 2002

The cellular machinery of Ferroplasma acidiphilum is iron-protein-dominated.

scientific article

The environment shapes microbial enzymes: five cold-active and salt-resistant carboxylesterases from marine metagenomes.

scientific article

The environmental and biosecurity characteristics of livestock carcass disposal methods: A review.

scientific article published on 08 January 2011

The genome analysis of Oleiphilus messinensis ME102 (DSM 13489T) reveals backgrounds of its obligate alkane-devouring marine lifestyle.

scientific article published on 9 August 2017

The gill chamber epibiosis of deep-sea shrimp Rimicaris exoculata: an in-depth metagenomic investigation and discovery of Zetaproteobacteria

scientific article

The intergenic transcribed spacer region 1 as a molecular marker for identification and discrimination of Enterobacteriaceae associated with acute oak decline

scientific article

The novel extremely acidophilic, cell-wall-deficient archaeon Cuniculiplasma divulgatum gen. nov., sp. nov. represents a new family, Cuniculiplasmataceae fam. nov., of the order Thermoplasmatales

scientific article

The ocean sampling day consortium

scientific article published in 2015

The rumen microbiome: an underexplored resource for novel antimicrobial discovery.

scientific article published in December 2017

Thermoleophilum album and Thermoleophilum minutum are culturable representatives of group 2 of the Rubrobacteridae (Actinobacteria) ⬇️

scientific article published on March 1, 2003

Transcriptional profiling of the marine oil-degrading bacterium Alcanivorax borkumensis during growth on n-alkanes

scientific article

Unveiling microbial life in new deep-sea hypersaline Lake Thetis. Part I: Prokaryotes and environmental settings.

scientific article

Unveiling microbial life in the new deep-sea hypersaline Lake Thetis. Part II: a metagenomic study.

scientific article published on 31 October 2011

Upstream-independent ribosomal RNA amplification analysis (URA): a new approach to characterizing the diversity of natural microbial communities.

scientific article published on October 2001

Utilization of low molecular weight organic compounds by the filterable fraction of a lotic microbiome

scientific article published on 02 December 2020

[Extracellular alkaline ribonucleases produced by Bacilli strains from the permafrost of the Kolyma lowland]

scientific article published on 01 November 1993

[Microorganisms from the digestive tract of the earthworms]

scientific article published on 01 May 2009

[Sequence and structure analysis of cryptic plasmid pN30 from oil-oxidizing strain Rhodococcus erythropolis 30]

scientific article published on 01 December 2005

[Two forms of extracellular low molecular weight Bacillus sp. BCF 247 ribonuclease. Isolation and characteristics of the protein]

scientific article published on 01 August 1993

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