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List of works by William Raymond Pearson

A System for Visualizing and Analyzing Near-Optimal Protein Sequence Alignments

scholarly article by Michael E. Smoot et al published 7 July 2005 in Information Visualization

A new approach to primer selection in polymerase chain reaction experiments.

scientific article

A platform for biological sequence comparison on parallel computers.

scientific article

A program for least squares analysis of reassociation and hybridization data.

scientific article published on June 1977

A strategy for the rapid identification of phosphorylation sites in the phosphoproteome

scientific article published in April 2002

Absence of short period interspersion of repetitive and non-repetitive sequences in the DNA of Drosophila melanogaster

scientific article published in July 1976

Adjusting scoring matrices to correct overextended alignments

scientific article

Aligning a DNA sequence with a protein sequence

scientific article published in January 1997

Aligning two sequences within a specified diagonal band

scientific article published in October 1992

An introduction to sequence similarity ("homology") searching

scientific article

Analysis of rat repetitive DNA sequences ⬇️

scientific article published on January 10, 1978

Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).

scientific article

Automatic construction of restriction site maps.

scientific article published on January 1982

BLAST and FASTA similarity searching for multiple sequence alignment

scientific article

Barriers to Integration of Bioinformatics into Undergraduate Life Sciences Education

article

Bioinformatics Core Competencies for Undergraduate Life Sciences Education

article

CRP: Cleavage of Radiolabeled Phosphoproteins

scientific article

Characterization of the human class Mu glutathione S-transferase gene cluster and the GSTM1 deletion

scientific article

Classification of Adrenergic Receptor Subtypes: Molecular Biologic Approaches

Comparing machine-independent versus machine-specific parallelization of a software platform for biological sequence comparison

scientific article published on April 1992

Comparison of DNA sequences with protein sequences.

scientific article published in November 1997

Comparison of methods for searching protein sequence databases.

scientific article

Computer programs for analysis of nucleic acid hybridization, thermal denaturation, and gel electrophoresis data ⬇️

scientific article published on August 24, 1979

Differences in induction by xenobiotics in murine tissues and the Hepa1c1c7 cell line of mRNAs encoding glutathione transferase, quinone reductase, and CYP1A P450s.

scientific article

Discrete-length repeated sequences in eukaryotic genomes ⬇️

scientific article published on July 1, 1981

Dynamic programming algorithms for biological sequence comparison

scientific article published on January 1, 1992

Empirical statistical estimates for sequence similarity searches.

scientific article

Entamoeba histolytica: sequence conservation of the Gal/GalNAc lectin from clinical isolates

scientific article

Erratum: Corrigendum: The genome of Cryptosporidium hominis

scientific article published in Nature

Evolution of protein sequences and structures.

scientific article

Exploring the relationship between sequence similarity and accurate phylogenetic trees.

scientific article

Finding Protein and Nucleotide Similarities with FASTA.

scientific article

Finding protein and nucleotide similarities with FASTA.

scientific article published in February 2004

Generalized neighbor-joining: more reliable phylogenetic tree reconstruction.

scientific article

Getting more from less: algorithms for rapid protein identification with multiple short peptide sequences

scientific article

Globally, unrelated protein sequences appear random

scientific article

Homologous over-extension: a challenge for iterative similarity searches

scientific article

Homozygous deletion of gene for glutathione S-transferase M1 in bladder cancer.

scientific article

Identification and characterization of GSTT3, a third murine Theta class glutathione transferase

scientific journal article

Identification of residues in glutathione transferase capable of driving functional diversification in evolution. A novel approach to protein redesign

scientific article (publication date: 7 March 2003)

Identifying distantly related protein sequences

Improved selection of canonical proteins for reference proteomes

scientific article published in 2024

Improving pairwise sequence alignment accuracy using near-optimal protein sequence alignments

scientific article

Long and short repeats of sea urchin DNA and their evolution

scientific article published on 01 January 1981

MACiE: exploring the diversity of biochemical reactions

scientific article

MIF proteins are not glutathione transferase homologs.

scientific article

Most partial domains in proteins are alignment and annotation artifacts

scientific article

No pain and gain!—experiences with Mentat on a biological application

Nomenclature for human glutathione transferases ⬇️

scientific article published on February 15, 1992

Nomenclature for mammalian soluble glutathione transferases

scientific article published in January 2005

PSI-Search: iterative HOE-reduced profile SSEARCH searching

scientific article

Phylogenies of glutathione transferase families

scientific article

Programming languages. II.

scientific article published in May 1985

Protein Function Prediction: Problems and Pitfalls

scientific article

Query-seeded iterative sequence similarity searching improves selectivity 5-20-fold

scientific article

RefProtDom: a protein database with improved domain boundaries and homology relationships

scientific article

Regulation of Synthesis of Amyloid A-Related Protein

scientific article published on 01 January 1982

Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms ⬇️

scientific article published on November 1, 1991

Selecting the Right Similarity-Scoring Matrix

scientific article

Sensitivity and selectivity in protein structure comparison

scientific article

Sequence organization of the rat genome by electron microscopy ⬇️

scientific article published on January 10, 1978

Sequence relationship between long and short repetitive DNA of the rat: a preliminary report ⬇️

scientific article published on October 1, 1977

Sequences and topology: the completeness of biological space

article published in 2007

Stoichiometry of chromatin proteins ⬇️

scientific article published on May 7, 1974

The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes

scientific article

The genome of Cryptosporidium hominis

scientific article

The limits of protein sequence comparison?

scientific article

The origin of nuclear receptor proteins: a single precursor distinct from other transcription factors ⬇️

scientific article published on January 1, 1992

Tissue-specific induction of murine glutathione transferase mRNAs by butylated hydroxyanisole ⬇️

scientific article published on September 15, 1988

Training for bioinformatics and computational biology

scientific article published on 01 September 2001

Use of site-directed mutagenesis of allele-specific PCR primers to identify the GSTM1 A, GSTM1 B, GSTM1 A,B and GSTM1 null polymorphisms at the glutathione S-transferase, GSTM1 locus.

scientific article published on October 1993

Using SQL Databases for Sequence Similarity Searching and Analysis

scientific article published on 13 September 2017

Using relational databases for improved sequence similarity searching and large-scale genomic analyses

scientific article

Using the FASTA Program to Search Protein and DNA Sequence Databases

article

Using the FASTA program to search protein and DNA sequence databases.

scientific article

Visualization of near-optimal sequence alignments

scientific article

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