List of works - Liam A McDonnell

30μm spatial resolution protein MALDI MSI: In-depth comparison of five sample preparation protocols applied to human healthy and atherosclerotic arteries.

scientific article

5-Methylthiopentose: a new substituent on lipoarabinomannan in Mycobacterium tuberculosis

scientific article published in February 2002

A mini-review of mass spectrometry using high-performance FTICR-MS methods

scientific article

A novel peptidomics approach to detect markers of Alzheimer's disease in cerebrospinal fluid

scientific article

An external matrix-assisted laser desorption ionization source for flexible FT-ICR Mass spectrometry imaging with internal calibration on adjacent samples.

scientific article

Automated imaging MS: Toward high throughput imaging mass spectrometry

scientific article

Automated, feature-based image alignment for high-resolution imaging mass spectrometry of large biological samples.

scientific article published on 18 March 2008

Automatic generic registration of mass spectrometry imaging data to histology using nonlinear stochastic embedding

scientific article

Automatic registration of imaging mass spectrometry data to the Allen Brain Atlas transcriptome

Automatic registration of mass spectrometry imaging data sets to the Allen brain atlas

scientific article

Characterization of Degraded Proteins in Paintings Using Bottom-Up Proteomic Approaches: New Strategies for Protein Digestion and Analysis of Data

scientific article published on 21 May 2018

Combined infrared multiphoton dissociation and electron-capture dissociation using co-linear and overlapping beams in Fourier transform ion cyclotron resonance mass spectrometry

scientific article published on 01 January 2006

Comprehensive analysis of the mouse brain proteome sampled in mass spectrometry imaging

scientific article published on 13 January 2015

Current State and Future Challenges of Mass Spectrometry Imaging for Clinical Research

scientific article published on 7 April 2015

De novo discovery of phenotypic intratumour heterogeneity using imaging mass spectrometry.

scientific article

Design and Performance of a Novel Interface for Combined Matrix-Assisted Laser Desorption Ionization at Elevated Pressure and Electrospray Ionization with Orbitrap Mass Spectrometry.

scientific article

Determination of the nature of naphthenic acids present in crude oils using nanospray Fourier transform ion cyclotron resonance mass spectrometry: the continued battle against corrosion.

scientific article published in February 2003

Discussion point: reporting guidelines for mass spectrometry imaging

scientific article published on 01 March 2015

Effect of local matrix crystal variations in matrix-assisted ionization techniques for mass spectrometry.

scientific article

Electron capture dissociation at low temperatures reveals selective dissociations

scientific article published on 01 December 2004

Examples of Fourier transform ion cyclotron resonance mass spectrometry developments: from ion physics to remote access biochemical mass spectrometry.

scientific article published in January 2005

Going forward: Increasing the accessibility of imaging mass spectrometry

scientific article (publication date: 30 August 2012)

High speed data processing for imaging MS-based molecular histology using graphical processing units

scientific article

High-spatial resolution mass spectrometric imaging of peptide and protein distributions on a surface

scientific article published in September 2004

Higher sensitivity secondary ion mass spectrometry of biological molecules for high resolution, chemically specific imaging.

scientific article published on 12 June 2006

Imaging mass spectrometry at cellular length scales

scientific article

Imaging mass spectrometry data reduction: automated feature identification and extraction

scientific article published on 21 August 2010

Imaging mass spectrometry of myxoid sarcomas identifies proteins and lipids specific to tumour type and grade, and reveals biochemical intratumour heterogeneity

scientific article

Imaging mass spectrometry statistical analysis

scientific article published on 26 June 2012

Imaging mass spectrometry to visualize biomolecule distributions in mouse brain tissue following hemispheric cortical spreading depression

scientific article

Imaging mass spectrometry-based molecular histology differentiates microscopically identical and heterogeneous tumors

scientific article

Imaging mass spectrometry.

scientific article

Imaging mass spectrometry: a user’s guide to a new technique for biological and biomedical research. Preface

scientific article published on 01 August 2012

Imaging of peptides in the rat brain using MALDI-FTICR mass spectrometry.

scientific article

Immunoglobulin G glycopeptide profiling by matrix-assisted laser desorption ionization Fourier transform ion cyclotron resonance mass spectrometry.

scientific article

Infrared mass spectrometric imaging below the diffraction limit.

scientific article published in May 2005

Interactive Visual Exploration of 3D Mass Spectrometry Imaging Data Using Hierarchical Stochastic Neighbor Embedding Reveals Spatiomolecular Structures at Full Data Resolution.

scientific article published on 12 February 2018

Investigations on aberrant glycosylation of glycosphingolipids in colorectal cancer tissues using liquid chromatography and matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF-MS).

scientific article

Large-scale mass spectrometry imaging investigation of consequences of cortical spreading depression in a transgenic mouse model of migraine.

scientific article published on 16 April 2015

MALDI imaging and profiling MS of higher mass proteins from tissue

scientific article

MALDI mass spectrometry imaging of proteins exceeding 30,000 daltons.

scientific article

MALDI-TOF-MS analysis of sialylated glycans and glycopeptides using 4-chloro-α-cyanocinnamic acid matrix.

scientific article

MSiMass list: a public database of identifications for protein MALDI MS imaging.

scientific article

Mass Spectrometry Imaging, Laser Capture Microdissection, and LC-MS/MS of the Same Tissue Section.

scientific article published on 25 June 2017

Mass spectrometry image correlation: quantifying colocalization

scientific article

Mass spectrometry in demonstrating the site-specific nitration of hen egg white lysozyme by an improved electrochemical method

scientific article

Molecular anatomy of ascending aorta in atherosclerosis by MS Imaging: Specific lipid and protein patterns reflect pathology.

scientific article published on 12 June 2015

Multicenter matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI MSI) identifies proteomic differences in breast-cancer-associated stroma

scientific article

Multiple statistical analysis techniques corroborate intratumor heterogeneity in imaging mass spectrometry datasets of myxofibrosarcoma

scientific article

N-glycosylation of colorectal cancer tissues: a liquid chromatography and mass spectrometry-based investigation.

scientific article

Nitromatrix provides improved LC-MALDI signals and more protein identifications.

scientific article

Peptide and protein imaging mass spectrometry in cancer research

scientific article

Precise Anatomic Localization of Accumulated Lipids in Mfp2 Deficient Murine Brains Through Automated Registration of SIMS Images to the Allen Brain Atlas

scientific article published on 28 April 2015

Proteomics analysis of serum small extracellular vesicles for the longitudinal study of a glioblastoma multiforme mouse model

scientific article published on 24 November 2020

Quantitative Microproteomics Based Characterization of the Central and Peripheral Nervous System of a Mouse Model of Krabbe Disease

scientific article published on 29 March 2019

Spatial epi-proteomics enabled by histone post-translational modification analysis from low-abundance clinical samples

scientific article published on 28 July 2021

Subcellular imaging mass spectrometry of brain tissue.

scientific article published in February 2005

Sustained off-resonance irradiation collision-induced dissociation of linear, substituted and cyclic polyesters using a 9.4 T Fourier transform ion cyclotron resonance mass spectrometer

scientific article published on 01 January 2003

Tools and strategies for visualization of large image data sets in high-resolution imaging mass spectrometry.

scientific article

Towards imaging metabolic pathways in tissues.

scientific article

Using Matrix Peaks To Map Topography: Increased Mass Resolution and Enhanced Sensitivity in Chemical Imaging

article

List of works by Liam A McDonnell

30μm spatial resolution protein MALDI MSI: In-depth comparison of five sample preparation protocols applied to human healthy and atherosclerotic arteries.

5-Methylthiopentose: a new substituent on lipoarabinomannan in Mycobacterium tuberculosis

A mini-review of mass spectrometry using high-performance FTICR-MS methods

A novel peptidomics approach to detect markers of Alzheimer's disease in cerebrospinal fluid

An external matrix-assisted laser desorption ionization source for flexible FT-ICR Mass spectrometry imaging with internal calibration on adjacent samples.

Automated imaging MS: Toward high throughput imaging mass spectrometry

Automated, feature-based image alignment for high-resolution imaging mass spectrometry of large biological samples.

Automatic generic registration of mass spectrometry imaging data to histology using nonlinear stochastic embedding

Automatic registration of imaging mass spectrometry data to the Allen Brain Atlas transcriptome

Automatic registration of mass spectrometry imaging data sets to the Allen brain atlas

Characterization of Degraded Proteins in Paintings Using Bottom-Up Proteomic Approaches: New Strategies for Protein Digestion and Analysis of Data

Combined infrared multiphoton dissociation and electron-capture dissociation using co-linear and overlapping beams in Fourier transform ion cyclotron resonance mass spectrometry

Comprehensive analysis of the mouse brain proteome sampled in mass spectrometry imaging

Current State and Future Challenges of Mass Spectrometry Imaging for Clinical Research

De novo discovery of phenotypic intratumour heterogeneity using imaging mass spectrometry.

Design and Performance of a Novel Interface for Combined Matrix-Assisted Laser Desorption Ionization at Elevated Pressure and Electrospray Ionization with Orbitrap Mass Spectrometry.

Determination of the nature of naphthenic acids present in crude oils using nanospray Fourier transform ion cyclotron resonance mass spectrometry: the continued battle against corrosion.

Discussion point: reporting guidelines for mass spectrometry imaging

Effect of local matrix crystal variations in matrix-assisted ionization techniques for mass spectrometry.

Electron capture dissociation at low temperatures reveals selective dissociations

Examples of Fourier transform ion cyclotron resonance mass spectrometry developments: from ion physics to remote access biochemical mass spectrometry.

Going forward: Increasing the accessibility of imaging mass spectrometry

High speed data processing for imaging MS-based molecular histology using graphical processing units

High-spatial resolution mass spectrometric imaging of peptide and protein distributions on a surface

Higher sensitivity secondary ion mass spectrometry of biological molecules for high resolution, chemically specific imaging.

Imaging mass spectrometry at cellular length scales

Imaging mass spectrometry data reduction: automated feature identification and extraction

Imaging mass spectrometry of myxoid sarcomas identifies proteins and lipids specific to tumour type and grade, and reveals biochemical intratumour heterogeneity

Imaging mass spectrometry statistical analysis

Imaging mass spectrometry to visualize biomolecule distributions in mouse brain tissue following hemispheric cortical spreading depression

Imaging mass spectrometry-based molecular histology differentiates microscopically identical and heterogeneous tumors

Imaging mass spectrometry.

Imaging mass spectrometry: a user’s guide to a new technique for biological and biomedical research. Preface

Imaging of peptides in the rat brain using MALDI-FTICR mass spectrometry.

Immunoglobulin G glycopeptide profiling by matrix-assisted laser desorption ionization Fourier transform ion cyclotron resonance mass spectrometry.

Infrared mass spectrometric imaging below the diffraction limit.

Interactive Visual Exploration of 3D Mass Spectrometry Imaging Data Using Hierarchical Stochastic Neighbor Embedding Reveals Spatiomolecular Structures at Full Data Resolution.

Investigations on aberrant glycosylation of glycosphingolipids in colorectal cancer tissues using liquid chromatography and matrix-assisted laser desorption time-of-flight mass spectrometry (MALDI-TOF-MS).

Large-scale mass spectrometry imaging investigation of consequences of cortical spreading depression in a transgenic mouse model of migraine.

MALDI imaging and profiling MS of higher mass proteins from tissue

MALDI mass spectrometry imaging of proteins exceeding 30,000 daltons.

MALDI-TOF-MS analysis of sialylated glycans and glycopeptides using 4-chloro-α-cyanocinnamic acid matrix.

MSiMass list: a public database of identifications for protein MALDI MS imaging.

Mass Spectrometry Imaging, Laser Capture Microdissection, and LC-MS/MS of the Same Tissue Section.

Mass spectrometry image correlation: quantifying colocalization

Mass spectrometry in demonstrating the site-specific nitration of hen egg white lysozyme by an improved electrochemical method

Molecular anatomy of ascending aorta in atherosclerosis by MS Imaging: Specific lipid and protein patterns reflect pathology.

Multicenter matrix-assisted laser desorption/ionization mass spectrometry imaging (MALDI MSI) identifies proteomic differences in breast-cancer-associated stroma

Multiple statistical analysis techniques corroborate intratumor heterogeneity in imaging mass spectrometry datasets of myxofibrosarcoma

N-glycosylation of colorectal cancer tissues: a liquid chromatography and mass spectrometry-based investigation.

Nitromatrix provides improved LC-MALDI signals and more protein identifications.

Peptide and protein imaging mass spectrometry in cancer research

Precise Anatomic Localization of Accumulated Lipids in Mfp2 Deficient Murine Brains Through Automated Registration of SIMS Images to the Allen Brain Atlas

Proteomics analysis of serum small extracellular vesicles for the longitudinal study of a glioblastoma multiforme mouse model

Quantitative Microproteomics Based Characterization of the Central and Peripheral Nervous System of a Mouse Model of Krabbe Disease

Spatial epi-proteomics enabled by histone post-translational modification analysis from low-abundance clinical samples

Subcellular imaging mass spectrometry of brain tissue.

Sustained off-resonance irradiation collision-induced dissociation of linear, substituted and cyclic polyesters using a 9.4 T Fourier transform ion cyclotron resonance mass spectrometer

Tools and strategies for visualization of large image data sets in high-resolution imaging mass spectrometry.

Towards imaging metabolic pathways in tissues.

Using Matrix Peaks To Map Topography: Increased Mass Resolution and Enhanced Sensitivity in Chemical Imaging