List of works - Thomas A Richards

A Cyclic GMP-Dependent K+ Channel in the Blastocladiomycete Fungus Blastocladiella emersonii

scientific article published on 6 July 2015

A Revised Taxonomy of Diplonemids Including the Eupelagonemidae n. fam. and a Type Species, Eupelagonema oceanica n. gen. & sp

scientific article published on 29 August 2018

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

scientific article published on 23 September 2019

A functional bacteria-derived restriction modification system in the mitochondrion of a heterotrophic protist

scientific article published on 23 April 2021

A fungal pathogen secretes plant alkalinizing peptides to increase infection.

scientific article published on 11 April 2016

A molecular perspective on ecological differentiation and biogeography of cyclotrichiid ciliates

scientific article published in November 2009

A rhodopsin-guanylyl cyclase gene fusion functions in visual perception in a fungus

scientific article published on 15 May 2014

A role for fungi as parasites in the black box of marine trophic interactions

scientific article

A single-cell genome reveals diplonemid-like ancestry of kinetoplastid mitochondrial gene structure

scientific article published on 07 October 2019

A tale of two tardigrades.

scientific article published on 15 April 2016

Ancestral function and diversification of a horizontally acquired oomycete carboxylic acid transporter.

scientific article published on 25 April 2018

Ancient diversification of eukaryotic MCM DNA replication proteins

scientific article

Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework

scientific article published on 23 October 2019

Benthic protists: the under-charted majority

scientific article

Cell Evolution: Gene Transfer Agents and the Origin of Mitochondria ⬇️

scientific article published on February 8, 2011

Characterization of the RNA-interference pathway as a tool for reverse genetic analysis in the nascent phototrophic endosymbiosis, <i>Paramecium bursaria</i>

scientific article published on 21 April 2021

Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides.

scientific article published in January 2018

Complex patterns of gene fission in the eukaryotic folate biosynthesis pathway

scientific article

Controlled sampling of ribosomally active protistan diversity in sediment-surface layers identifies putative players in the marine carbon sink

scientific article published on 09 January 2020

Coral symbiosis is a three-player game

scientific article published on 01 April 2019

Cryptic infection of a broad taxonomic and geographic diversity of tadpoles by Perkinsea protists

scientific article published on 10 August 2015

DNA evidence for global dispersal and probable endemicity of protozoa

scientific article published in 2007

Discovery of novel intermediate forms redefines the fungal tree of life

scientific article

Diverse alveolate infections of tadpoles, a new threat to frogs?

scientific article published on 13 February 2020

Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments

scientific article (publication date: 29 April 2014)

Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean

scientific article

Diversity and distribution of unicellular opisthokonts along the European coast analysed using high-throughput sequencing

scientific article published on 30 December 2014

Dynamics of genomic innovation in the unicellular ancestry of animals

scientific article published on 20 July 2017

Editorial overview: Investigating phenotype evolution in the post-genomic era

scientific article published on 18 October 2019

Environment-dependent fitness gains can be driven by horizontal gene transfer of transporter-encoding genes

article

Evidence for mitochondrial-derived alternative oxidase in the apicomplexan parasite Cryptosporidium parvum: a potential anti-microbial agent target

scientific article published in March 2004

Evolution and classification of myosins, a paneukaryotic whole-genome approach

scientific article published on February 2014

Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms.

scientific article

Evolution of the Isd11-IscS complex reveals a single alpha-proteobacterial endosymbiosis for all eukaryotes

scientific article published on 28 April 2006

Evolutionary conservation of a core fungal phosphate homeostasis pathway coupled to development in Blastocladiella emersonii.

scientific article published on 5 April 2018

Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements

scientific article

Gene transfer into the fungi

article

Gene transfer: anything goes in plant mitochondria

scientific article published on 22 December 2010

Genome evolution: horizontal movements in the fungi.

scientific article

Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life ⬇️

scientific article published on December 10, 2012

Horizontal Gene Transfer and the Evolution of Parasitic Protozoa

article

Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

scientific article

Horizontal gene transfer in eukaryotic plant pathogens.

scientific article published on January 2014

Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton

scientific article

Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing

scientific article

Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity?

article

Intracellular Infection of Diverse Diatoms by an Evolutionary Distinct Relative of the Fungi

scientific article published on 14 November 2019

Marine fungi: their ecology and molecular diversity

scientific article

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

scientific article published on 28 June 2015

Molecular diversity and distribution of marine fungi across 130 European environmental samples

scientific article published in November 2015

Molecular screening of free-living microbial eukaryotes: diversity and distribution using a meta-analysis

scientific article published in June 2005

Morphological Identification and Single-Cell Genomics of Marine Diplonemids

scientific article

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

scientific article

Myosin domain evolution and the primary divergence of eukaryotes

scientific article published in August 2005

Nematopsis temporariae (Gregarinasina, Apicomplexa, Alveolata) intracellular infectious agent of tadpole livers

scientific article

Newly identified and diverse plastid-bearing branch on the eukaryotic tree of life.

scientific article

Organelle evolution: a mosaic of 'mitochondrial' functions

scientific article

Osmotrophy

scientific article published on 01 October 2018

PDZD8 is not the 'functional ortholog' of Mmm1, it is a paralog

scientific article published on 16 July 2018

Pan genome of the phytoplankton Emiliania underpins its global distribution.

scientific article

Patterns of kinesin evolution reveal a complex ancestral eukaryote with a multifunctional cytoskeleton

scientific article

Patterns of rare and abundant marine microbial eukaryotes

scientific article

Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans.

scientific article

Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi

scientific article published on 7 July 2009

Phylogeny, Evidence for a Cryptic Plastid, and Distribution of Chytriodinium Parasites (Dinophyceae) Infecting Copepods

scientific article published on 11 December 2018

Predicted microbial secretomes and their target substrates in marine sediment.

scientific article published on 23 October 2017

Protistology: How to build a microbial eye.

scientific article

Single cell ecology

scientific article published on 07 October 2019

Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates

scientific article published on 10 October 2017

Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation

article

Symbiosis: Wolf Lichens Harbour a Choir of Fungi

scientific article published on 01 February 2019

The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages

scientific article published in September 2005

The role of horizontal gene transfer in the evolution of the oomycetes

scientific article published on 28 May 2015

The secreted proteins of Achlya hypogyna and Thraustotheca clavata identify the ancestral oomycete secretome and reveal gene acquisitions by horizontal gene transfer

scientific article

The unusual mitochondrial compartment of Cryptosporidium parvum

scientific article

Unexpected mitochondrial genome diversity revealed by targeted single-cell genomics of heterotrophic flagellated protists

scientific article published on 25 November 2019

What Defines the "Kingdom" Fungi?

scientific article published on June 2017

Yeast forms dominate fungal diversity in the deep oceans

scientific article

List of works by Thomas A Richards

A Cyclic GMP-Dependent K+ Channel in the Blastocladiomycete Fungus Blastocladiella emersonii

A Revised Taxonomy of Diplonemids Including the Eupelagonemidae n. fam. and a Type Species, Eupelagonema oceanica n. gen. & sp

A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators

A functional bacteria-derived restriction modification system in the mitochondrion of a heterotrophic protist

A fungal pathogen secretes plant alkalinizing peptides to increase infection.

A molecular perspective on ecological differentiation and biogeography of cyclotrichiid ciliates

A rhodopsin-guanylyl cyclase gene fusion functions in visual perception in a fungus

A role for fungi as parasites in the black box of marine trophic interactions

A single-cell genome reveals diplonemid-like ancestry of kinetoplastid mitochondrial gene structure

A tale of two tardigrades.

Ancestral function and diversification of a horizontally acquired oomycete carboxylic acid transporter.

Ancient diversification of eukaryotic MCM DNA replication proteins

Assessing the Diversity and Distribution of Apicomplexans in Host and Free-Living Environments Using High-Throughput Amplicon Data and a Phylogenetically Informed Reference Framework

Benthic protists: the under-charted majority

Cell Evolution: Gene Transfer Agents and the Origin of Mitochondria ⬇️

Characterization of the RNA-interference pathway as a tool for reverse genetic analysis in the nascent phototrophic endosymbiosis, <i>Paramecium bursaria</i>

Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides.

Complex patterns of gene fission in the eukaryotic folate biosynthesis pathway

Controlled sampling of ribosomally active protistan diversity in sediment-surface layers identifies putative players in the marine carbon sink

Coral symbiosis is a three-player game

Cryptic infection of a broad taxonomic and geographic diversity of tadpoles by Perkinsea protists

DNA evidence for global dispersal and probable endemicity of protozoa

Discovery of novel intermediate forms redefines the fungal tree of life

Diverse alveolate infections of tadpoles, a new threat to frogs?

Diverse molecular signatures for ribosomally 'active' Perkinsea in marine sediments

Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean

Diversity and distribution of unicellular opisthokonts along the European coast analysed using high-throughput sequencing

Dynamics of genomic innovation in the unicellular ancestry of animals

Editorial overview: Investigating phenotype evolution in the post-genomic era

Environment-dependent fitness gains can be driven by horizontal gene transfer of transporter-encoding genes

Evidence for mitochondrial-derived alternative oxidase in the apicomplexan parasite Cryptosporidium parvum: a potential anti-microbial agent target

Evolution and classification of myosins, a paneukaryotic whole-genome approach

Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms.

Evolution of the Isd11-IscS complex reveals a single alpha-proteobacterial endosymbiosis for all eukaryotes

Evolutionary conservation of a core fungal phosphate homeostasis pathway coupled to development in Blastocladiella emersonii.

Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements

Gene transfer into the fungi

Gene transfer: anything goes in plant mitochondria

Genome evolution: horizontal movements in the fungi.

Genome-scale comparative analysis of gene fusions, gene fissions, and the fungal tree of life ⬇️

Horizontal Gene Transfer and the Evolution of Parasitic Protozoa

Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

Horizontal gene transfer in eukaryotic plant pathogens.

Host-derived viral transporter protein for nitrogen uptake in infected marine phytoplankton

Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing

Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity?

Intracellular Infection of Diverse Diatoms by an Evolutionary Distinct Relative of the Fungi

Marine fungi: their ecology and molecular diversity

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Molecular diversity and distribution of marine fungi across 130 European environmental samples

Molecular screening of free-living microbial eukaryotes: diversity and distribution using a meta-analysis

Morphological Identification and Single-Cell Genomics of Marine Diplonemids

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

Myosin domain evolution and the primary divergence of eukaryotes

Nematopsis temporariae (Gregarinasina, Apicomplexa, Alveolata) intracellular infectious agent of tadpole livers

Newly identified and diverse plastid-bearing branch on the eukaryotic tree of life.

Organelle evolution: a mosaic of 'mitochondrial' functions

Osmotrophy

PDZD8 is not the 'functional ortholog' of Mmm1, it is a paralog

Pan genome of the phytoplankton Emiliania underpins its global distribution.

Patterns of kinesin evolution reveal a complex ancestral eukaryote with a multifunctional cytoskeleton

Patterns of rare and abundant marine microbial eukaryotes

Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans.

Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi

Phylogeny, Evidence for a Cryptic Plastid, and Distribution of Chytriodinium Parasites (Dinophyceae) Infecting Copepods

Predicted microbial secretomes and their target substrates in marine sediment.

Protistology: How to build a microbial eye.

Single cell ecology

Single cell genomics of uncultured marine alveolates shows paraphyly of basal dinoflagellates

Specialized proteomic responses and an ancient photoprotection mechanism sustain marine green algal growth during phosphate limitation

Symbiosis: Wolf Lichens Harbour a Choir of Fungi

The molecular diversity of freshwater picoeukaryotes from an oligotrophic lake reveals diverse, distinctive and globally dispersed lineages

The role of horizontal gene transfer in the evolution of the oomycetes

The secreted proteins of Achlya hypogyna and Thraustotheca clavata identify the ancestral oomycete secretome and reveal gene acquisitions by horizontal gene transfer

The unusual mitochondrial compartment of Cryptosporidium parvum

Unexpected mitochondrial genome diversity revealed by targeted single-cell genomics of heterotrophic flagellated protists

What Defines the "Kingdom" Fungi?

Yeast forms dominate fungal diversity in the deep oceans