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List of works by Jeremy Luban

A dual task for the Xbp1-responsive OS-9 variants in the mammalian endoplasmic reticulum: inhibiting secretion of misfolded protein conformers and enhancing their disposal

scientific article

AIF and cyclophilin A cooperate in apoptosis-associated chromatinolysis

scientific article published on February 2004

ATPgammaS disrupts human immunodeficiency virus type 1 virion core integrity

scientific article

Absconding with the Chaperone: Essential Cyclophilin–Gag Interaction in HIV-1 Virions

article

An invariant surface patch on the TRIM5alpha PRYSPRY domain is required for retroviral restriction but dispensable for capsid binding

scientific article published on 19 January 2009

Arsenic counteracts human immunodeficiency virus type 1 restriction by various TRIM5 orthologues in a cell type-dependent manner

scientific article

As(2)O(3) enhances retroviral reverse transcription and counteracts Ref1 antiviral activity

scientific article

Assignment of cyclophilin A (PPIA) to human chromosome band 7p13 by in situ hybridization

Association of TRIM22 with the type 1 interferon response and viral control during primary HIV-1 infection

scientific article

Basic residues in human immunodeficiency virus type 1 nucleocapsid promote virion assembly via interaction with RNA.

scientific article

Characterization of simian immunodeficiency virus SIVSM/human immunodeficiency virus type 2 Vpx function in human myeloid cells

scientific article published on October 2008

Closing the net on retroviruses

scientific article

Conformational changes in the Ebola virus membrane fusion machine induced by pH, Ca2+, and receptor binding

scientific article published on 10 February 2020

Conformational dynamics and allosteric modulation of the SARS-CoV-2 spike

scientific article published on 24 March 2022

Context-dependent phenotype of a human immunodeficiency virus type 1 nucleocapsid mutation

scientific article

Covalent modification of human immunodeficiency virus type 1 p6 by SUMO-1.

scientific article

Cyclophilin A and TRIM5alpha independently regulate human immunodeficiency virus type 1 infectivity in human cells

scientific article

Cyclophilin A interacts with HIV-1 Vpr and is required for its functional expression

scientific article published on 23 July 2003

Cyclophilin A is required for TRIM5{alpha}-mediated resistance to HIV-1 in Old World monkey cells

scientific article

Cyclophilin A modulates the sensitivity of HIV-1 to host restriction factors

scientific article published on 3 August 2003

Cyclophilin A participates in the nuclear translocation of apoptosis-inducing factor in neurons after cerebral hypoxia-ischemia

scientific article

Cyclophilin A peptidyl-prolyl isomerase activity promotes ZPR1 nuclear export

scientific article

Cyclophilin A promotes HIV-1 reverse transcription but its effect on transduction correlates best with its effect on nuclear entry of viral cDNA.

scientific article published on 30 January 2014

Cyclophilin A protects HIV-1 from restriction by human TRIM5α

scientific article published on 21 October 2019

Cyclophilin A regulates HIV-1 infectivity, as demonstrated by gene targeting in human T cells

scientific article

Cyclophilin A regulates TCR signal strength in CD4+ T cells via a proline-directed conformational switch in Itk.

scientific article

Cyclophilin A, TRIM5, and resistance to human immunodeficiency virus type 1 infection

scientific article published on 6 September 2006

Cyclophilin B interacts with sodium-potassium ATPase and is required for pump activity in proximal tubule cells of the kidney

scientific article

Cyclophilin, TRIM5, and innate immunity to HIV-1

scientific article

Cyclosporine A-sensitive, cyclophilin B-dependent endoplasmic reticulum-associated degradation

scientific article

Cyclosporine blocks incorporation of HIV-1 envelope glycoprotein into virions

scientific article

Deciphering the code for retroviral integration target site selection

scientific article

Disruption of human TRIM5alpha antiviral activity by nonhuman primate orthologues

scientific article

Ebola Virus Glycoprotein with Increased Infectivity Dominated the 2013-2016 Epidemic

scientific article published on November 2016

Efficient IgM assembly and secretion require the plasma cell induced endoplasmic reticulum protein pERp1

scientific journal article

End Sequence Analysis Toolkit (ESAT) expands the extractable information from single-cell RNA-seq data.

scientific article

Envelope-dependent, cyclophilin-independent effects of glycosaminoglycans on human immunodeficiency virus type 1 attachment and infection

scientific article published on June 2002

Essential Role of Cyclophilin A for Hepatitis C Virus Replication and Virus Production and Possible Link to Polyprotein Cleavage Kinetics

scientific article

Evidence for biphasic uncoating during HIV-1 infection from a novel imaging assay

scientific article published on 09 July 2013

G2 cell cycle arrest and cyclophilin A in lentiviral gene transfer

scientific article published on 9 August 2006

Gammaretroviral pol sequences act in cis to direct polysome loading and NXF1/NXT-dependent protein production by gag-encoded RNA.

scientific article

HERV-H RNA is abundant in human embryonic stem cells and a precise marker for pluripotency.

scientific article published on 20 December 2012

HIV-1 Infection: Going Nuclear with TNPO3/Transportin-SR2 and Integrase

article

HIV-1 Nef promotes infection by excluding SERINC5 from virion incorporation

scientific article

HIV-1 R5 Macrophage-Tropic Envelope Glycoprotein Trimers Bind CD4 with High Affinity, while the CD4 Binding Site on Non-macrophage-tropic, T-Tropic R5 Envelopes Is Occluded

scientific article published on 8 November 2017

HIV-1 Vpr induces defects in mitosis, cytokinesis, nuclear structure, and centrosomes

scientific article

HIV-1 Vpu neutralizes the antiviral factor Tetherin/BST-2 by binding it and directing its beta-TrCP2-dependent degradation

scientific article published on 4 September 2009

HIV-1 and Ebola virus: The getaway driver nabbed ⬇️

scientific article published on December 1, 2001

HIV-1 capsid is involved in post-nuclear entry steps

scientific article published on 23 April 2016

HIV-1-induced cytokines deplete homeostatic innate lymphoid cells and expand TCF7-dependent memory NK cells

scientific article published on 17 February 2020

Human Anti-HIV-1 gp120 Monoclonal Antibodies with Neutralizing Activity Cloned from Humanized Mice Infected with HIV-1

scientific article published on 28 December 2018

Human cellular restriction factors that target HIV-1 replication

scientific article published on 16 September 2009

Human immunodeficiency virus type 1 Gag protein binds to cyclophilins A and B

scientific article (publication date: 18 June 1993)

Human immunodeficiency virus type 1 virion density is not determined by nucleocapsid basic residues

scientific article published in August 2000

Influence of different glycoproteins and of the virion core on SERINC5 antiviral activity

scientific article published on 25 September 2019

Inhibition of HIV-1 infection by TNPO3 depletion is determined by capsid and detectable after viral cDNA enters the nucleus

scientific article published on 6 December 2011

Inhibition of HIV-1 replication by cyclosporine A or related compounds correlates with the ability to disrupt the Gag-cyclophilin A interaction

scientific article published on August 1996

Innate Immune Sensing of HIV-1 by Dendritic Cells ⬇️

scientific article published on October 18, 2012

Intron-containing RNA from the HIV-1 provirus activates type I interferon and inflammatory cytokines

article

Intron-containing RNA from the HIV-1 provirus activates type I interferon and inflammatory cytokines

scientific article published in Nature Communications

Lentiviral vector gene transfer is limited by the proteasome at postentry steps in various types of stem cells

scientific article

Lv1 inhibition of human immunodeficiency virus type 1 is counteracted by factors that stimulate synthesis or nuclear translocation of viral cDNA

scientific article

Lv4 Is a Capsid-Specific Antiviral Activity in Human Blood Cells That Restricts Viruses of the SIVMAC/SIVSM/HIV-2 Lineage Prior to Integration

scientific article (publication date: July 2015)

More than one way to TRIM a capsid ⬇️

scientific article published on November 13, 2012

Nef decreases HIV-1 sensitivity to neutralizing antibodies that target the membrane-proximal external region of TMgp41.

scientific article

OMEGA: a software tool for the management, analysis, and dissemination of intracellular trafficking data that incorporates motion type classification and quality control

Optimization by infusion of multiple reaction monitoring transitions for sensitive quantification of peptides by liquid chromatography/mass spectrometry

scientific article

Optimization of human dendritic cell sample preparation for mass spectrometry-based proteomic studies

scientific article published on 15 May 2015

Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events

scientific article published on 10 December 2020

Potent inhibition of HIV-1 by TRIM5-cyclophilin fusion proteins engineered from human components

scientific article published on 08 September 2009

Primate immunodeficiency virus Vpx and Vpr counteract transcriptional repression of proviruses by the HUSH complex

Primate immunodeficiency virus proteins Vpx and Vpr counteract transcriptional repression of proviruses by the HUSH complex

article

Processing strategies and software solutions for data-independent acquisition in mass spectrometry

scientific article

Production of Ribosome Components in Effector CD4+ T Cells Is Accelerated by TCR Stimulation and Coordinated by ERK-MAPK

article

Ranking Fragment Ions Based on Outlier Detection for Improved Label-Free Quantification in Data-Independent Acquisition LC-MS/MS.

scientific article

Real-Time Analysis of Individual Ebola Virus Glycoproteins Reveals Pre-Fusion, Entry-Relevant Conformational Dynamics

scientific article published on 15 January 2020

Relative efficacy of human monocytes and dendritic cells as accessory cells for T cell replication

scientific article

Reporter Assays for Ebola Virus Nucleoprotein Oligomerization, Virion-Like Particle Budding, and Minigenome Activity Reveal the Importance of Nucleoprotein Amino Acid Position 111

scientific article published on 15 January 2020

Rescue of multiple viral functions by a second-site suppressor of a human immunodeficiency virus type 1 nucleocapsid mutation.

scientific article

SARS-CoV-2 Spike protein variant D614G increases infectivity and retains sensitivity to antibodies that target the receptor binding domain

scientific article published on 04 July 2020

Selection for loss of Ref1 activity in human cells releases human immunodeficiency virus type 1 from cyclophilin A dependence during infection

scientific article

Specific antimononuclear phagocyte monoclonal antibodies. Application to the purification of dendritic cells and the tissue localization of macrophages

scientific article published on July 1983

Specific incorporation of heat shock protein 70 family members into primate lentiviral virions

scientific article

TCR stimulation with modified anti-CD3 mAb expands CD8+ T cell population and induces CD8+CD25+ Tregs

scientific article published on 15 September 2005

TNPO3 protects HIV-1 replication from CPSF6-mediated capsid stabilization in the host cell cytoplasm.

scientific article published on 15 February 2013

TRIM protein-mediated regulation of inflammatory and innate immune signaling and its association with antiretroviral activity

scientific article

TRIM22 inhibits HIV-1 transcription independently of its E3 ubiquitin ligase activity, Tat, and NF-kappaB-responsive long terminal repeat elements

scientific article

TRIM34 restricts HIV-1 and SIV capsids in a TRIM5α-dependent manner

scientific article published on 13 April 2020

TRIM5 Retroviral Restriction Activity Correlates with the Ability To Induce Innate Immune Signaling.

scientific article

TRIM5 and the Regulation of HIV-1 Infectivity ⬇️

scientific article published on May 30, 2012

TRIM5 is an innate immune sensor for the retrovirus capsid lattice

scientific article

TRIM5 structure, HIV-1 capsid recognition, and innate immune signaling

scientific article published on 5 March 2012

TRIM5alpha selectively binds a restriction-sensitive retroviral capsid

scientific article

TRIM5α and TRIM22 are differentially regulated according to HIV-1 infection phase and compartment

scientific article published on 29 January 2014

TRIM5α associates with proteasomal subunits in cells while in complex with HIV-1 virions

scientific article

Target cell cyclophilin A modulates human immunodeficiency virus type 1 infectivity

scientific article published on December 2004

The Use of Variable Q1 Isolation Windows Improves Selectivity in LC-SWATH-MS Acquisition

scientific article published on 24 August 2015

The carboxyl-terminus of human immunodeficiency virus type 2 circulating recombinant form 01_AB capsid protein affects sensitivity to human TRIM5α.

scientific article

The double-stranded RNA binding domain of the vaccinia virus E3L protein inhibits both RNA- and DNA-induced activation of interferon beta

scientific article published on 7 July 2009

The fate of HIV-1 capsid: a biochemical assay for HIV-1 uncoating

scientific article

The hidden cost of genetic resistance to HIV-1

scientific article published on 01 June 2019

The retinoblastoma protein and BRG1 form a complex and cooperate to induce cell cycle arrest

scientific article

The retroviral restriction factor TRIM5alpha

scientific article published on March 2007

The role of lysine 186 in HIV-1 integrase multimerization

scientific article

The yeast two-hybrid system for studying protein-protein interactions

scientific article published on February 1995

Vif counteracts a cyclophilin A-imposed inhibition of simian immunodeficiency viruses in human cells

scientific article

Vpx rescue of HIV-1 from the antiviral state in mature dendritic cells is independent of the intracellular deoxynucleotide concentration

scientific article published on February 2014

Vpx rescues HIV-1 transduction of dendritic cells from the antiviral state established by type 1 interferon

scientific article

p62/sequestosome-1 associates with and sustains the expression of retroviral restriction factor TRIM5alpha

scientific article

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