List of works by Alexandre P Francisco

Cache-Oblivious Hilbert Curve based Blocking-Scheme for Matrix Transposition

scientific article published in 2022

Fast phylogenetic inference from typing data.

scientific article published on 15 February 2018

Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach

scientific article

GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens

scientific article published on 26 July 2018

Influence and Sentiment Homophily on Twitter Social Circles

scholarly article by Hugo Lopes et al published 2016 in Studies in Computational Intelligence

Interactogeneous: disease gene prioritization using heterogeneous networks and full topology scores

scientific article

Mining Large Query Induced Graphs towards a Hierarchical Query Folksonomy

Mining query log graphs towards a query folksonomy

Not seeing the forest for the trees: size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis

scientific article published on 23 March 2015

PHYLOViZ 2.0: providing scalable data integration and visualization for multiple phylogenetic inference methods

scientific article

PHYLOViZ Online: web-based tool for visualization, phylogenetic inference, analysis and sharing of minimum spanning trees

scientific article

PHYLOViZ: phylogenetic inference and data visualization for sequence based typing methods.

scientific article

Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis

scientific article

Regulatory Snapshots: integrative mining of regulatory modules from expression time series and regulatory networks

scientific article

TFRank: network-based prioritization of regulatory associations underlying transcriptional responses

scientific article

The YEASTRACT database: an upgraded information system for the analysis of gene and genomic transcription regulation in Saccharomyces cerevisiae ⬇️

scientific article published on 28 October 2013

TypOn: the microbial typing ontology

scientific article

Using Machine Learning to Improve the Prediction of Functional Outcome in Ischemic Stroke Patients

scientific article published on 01 March 2018

YEASTRACT-DISCOVERER: new tools to improve the analysis of transcriptional regulatory associations in Saccharomyces cerevisiae

scientific article

YEASTRACT: providing a programmatic access to curated transcriptional regulatory associations in Saccharomyces cerevisiae through a web services interface

scientific article published on 23 October 2010

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